Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02624 Sapria himalayana HOM05D003779 ORTHO05D002678 8.5e-96 353.6 170 100.0
Manes.14G111700 Manihot esculenta HOM05D003779 ORTHO05D002678 5.1e-24 115.2 96 56.2
GSVIVG01023597001 Vitis vinifera HOM05D003779 ORTHO05D002678 5.1e-24 115.2 96 57.3
Cfa020847 Carpinus fangiana HOM05D003779 ORTHO05D002678 1.1e-23 114.0 96 57.3
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 7.3e-23 111.3 96 57.3
Dinv43216 Davidia involucrata HOM05D003779 ORTHO05D002678 7.3e-23 111.3 96 57.3
CiPaw.15G174200 Carya illinoinensis HOM05D003779 ORTHO05D002678 2.8e-22 109.4 96 55.2
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 3.6e-22 109.0 96 56.2
CiPaw.16G114900 Carya illinoinensis HOM05D003779 ORTHO05D002678 4.7e-22 108.6 92 57.6
Gohir.A07G026300 Gossypium hirsutum HOM05D003779 ORTHO05D002678 6.2e-22 108.2 94 55.3
COL.COLO4_18776 Corchorus olitorius HOM05D003779 ORTHO05D002678 8.1e-22 107.8 94 57.4
Glyma.09G097600 Glycine max HOM05D003779 ORTHO05D002678 8.1e-22 107.8 89 58.4
Glyma.15G205600 Glycine max HOM05D003779 ORTHO05D002678 8.1e-22 107.8 96 54.2
Haze_19235 Corylus avellana HOM05D003779 ORTHO05D002678 1.1e-21 107.5 92 56.5
Lj9C714G7 Lonicera japonica HOM05D003779 ORTHO05D002678 1.1e-21 107.5 89 60.7
Thecc.09G033700 Theobroma cacao HOM05D003779 ORTHO05D002678 1.1e-21 107.5 94 55.3
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 1.4e-21 107.1 96 55.2
Phvul.009G194000 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 1.4e-21 107.1 96 52.1
Dinv41398 Davidia involucrata HOM05D003779 ORTHO05D002678 1.8e-21 106.7 97 57.7
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 2.4e-21 106.3 96 54.2
VMungo1309G0106 Vigna mungo HOM05D003779 ORTHO05D002678 2.4e-21 106.3 96 53.1
Gohir.D07G030200 Gossypium hirsutum HOM05D003779 ORTHO05D002678 3.1e-21 105.9 94 54.3
Gorai.001G031400 Gossypium raimondii HOM05D003779 ORTHO05D002678 3.1e-21 105.9 94 54.3
Duzib168G2294 Durio zibethinus HOM05D003779 ORTHO05D002678 6.9e-21 104.8 94 56.4
Atru.chr7.134 Acer truncatum HOM05D003779 ORTHO05D002678 8.9e-21 104.4 92 56.5
TPR.G35880 Trifolium pratense HOM05D003779 ORTHO05D002678 1.2e-20 104.0 93 53.8
Duzib187G1590 Durio zibethinus HOM05D003779 ORTHO05D002678 1.5e-20 103.6 94 54.3
Gohir.D13G191400 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.5e-20 103.6 94 54.3
Oeu026547.1 Olea europaea HOM05D003779 ORTHO05D002678 1.5e-20 103.6 93 52.7
TAR625G1002 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.5e-20 103.6 92 57.6
TAR636G1028 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.5e-20 103.6 88 55.7
Gohir.A13G184900 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.6e-20 102.8 94 54.3
Oeu026546.1 Olea europaea HOM05D003779 ORTHO05D002678 2.6e-20 102.8 92 53.3
QL02p092676 Quercus lobata HOM05D003779 ORTHO05D002678 2.6e-20 102.8 92 57.6
FAN28G2365 Fragaria x ananassa HOM05D003779 ORTHO05D002678 3.4e-20 102.4 96 53.1
ClCG06G012240 Citrullus lanatus HOM05D003779 ORTHO05D002678 4.4e-20 102.1 92 54.3
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea HOM05D003779 ORTHO05D002678 7.6e-20 101.3 93 51.6
Lalb_Chr08g0233951 Lupinus albus HOM05D003779 ORTHO05D002678 7.6e-20 101.3 89 56.2
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea HOM05D003779 ORTHO05D002678 9.9e-20 100.9 93 51.6
FvH4_1g01180 Fragaria vesca HOM05D003779 ORTHO05D002678 9.9e-20 100.9 96 53.1
FAN19G1766 Fragaria x ananassa HOM05D003779 ORTHO05D002678 9.9e-20 100.9 96 53.1
Medtr2g450210 Medicago truncatula HOM05D003779 ORTHO05D002678 9.9e-20 100.9 93 52.7
Oeu050477.1 Olea europaea HOM05D003779 ORTHO05D002678 9.9e-20 100.9 92 53.3
CSS0005827 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.3e-19 100.5 92 54.3
Gorai.013G217400 Gossypium raimondii HOM05D003779 ORTHO05D002678 1.3e-19 100.5 94 53.2
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 2.2e-19 99.8 92 53.3
MELO3C010242.2 Cucumis melo HOM05D003779 ORTHO05D002678 2.2e-19 99.8 92 52.2
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 2.9e-19 99.4 94 53.2
CsaV3_1G028740 Cucumis sativus L. HOM05D003779 ORTHO05D002678 3.8e-19 99.0 92 52.2
FAN26G3236 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.9e-19 98.6 96 52.1
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 4.9e-19 98.6 92 52.2
HanXRQChr12g0357201 Helianthus annuus HOM05D003779 ORTHO05D002678 6.4e-19 98.2 94 55.3
Lsat_1_v5_gn_5_91481 Lactuca sativa HOM05D003779 ORTHO05D002678 6.4e-19 98.2 93 55.9
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 8.4e-19 97.8 96 52.1
Lalb_Chr08g0234021 Lupinus albus HOM05D003779 ORTHO05D002678 8.4e-19 97.8 89 53.9
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 1.9e-18 96.7 92 51.1
ECA234G1613 Erigeron canadensis HOM05D003779 ORTHO05D002678 2.4e-18 96.3 93 53.8
HPP92_020551 Vanilla planifolia HOM05D003779 ORTHO05D002678 2.4e-18 96.3 89 51.7
Ciclev10007258m.g Citrus clementina HOM05D003779 ORTHO05D002678 3.2e-18 95.9 88 55.7
Psat1g022120 Pisum sativum HOM05D003779 ORTHO05D002678 3.2e-18 95.9 94 50.0
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 5.4e-18 95.1 92 55.4
Rhsim01G0036200 Rhododendron simsii HOM05D003779 ORTHO05D002678 9.3e-18 94.4 92 51.1
Rhsim01G0045400 Rhododendron simsii HOM05D003779 ORTHO05D002678 9.3e-18 94.4 92 51.1
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 9.3e-18 94.4 96 54.2
PGR102G2779 Punica granatum HOM05D003779 ORTHO05D002678 1.6e-17 93.6 92 53.3
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 2.1e-17 93.2 96 52.1
Manes.06G037900 Manihot esculenta HOM05D003779 ORTHO05D002678 4.6e-17 92.0 96 50.0
MD02G1009900 Malus domestica HOM05D003779 ORTHO05D002678 1.3e-16 90.5 98 49.0
DCAR_019379 Daucus carota HOM05D003779 ORTHO05D002678 3.9e-16 89.0 92 48.9
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 3.9e-16 89.0 88 52.3
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 5.1e-16 88.6 163 38.7
Sed0010991 Sechium edule HOM05D003779 ORTHO05D002678 6.6e-16 88.2 92 50.0
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 6.6e-16 88.2 96 52.1
Ca_14533_v3 Cicer arietinum L. HOM05D003779 ORTHO05D002678 1.5e-15 87.0 93 48.4
HanXRQChr10g0314671 Helianthus annuus HOM05D003779 ORTHO05D002678 2.5e-15 86.3 93 50.5
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 3.3e-15 85.9 88 52.3
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 3.3e-15 85.9 163 38.0
Aa31LG3G13870 Aethionema arabicum HOM05D003779 ORTHO05D002678 4.3e-15 85.5 86 55.8
Potri.018G110100 Populus trichocarpa HOM05D003779 ORTHO05D002678 5.6e-15 85.1 96 50.0
Lalb_Chr13g0300951 Lupinus albus HOM05D003779 ORTHO05D002678 9.6e-15 84.3 88 51.1
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 2.1e-14 83.2 86 50.0
Gohir.D05G053000 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.1e-14 83.2 90 50.0
Gorai.009G054800 Gossypium raimondii HOM05D003779 ORTHO05D002678 2.8e-14 82.8 90 50.0
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 2.8e-14 82.8 86 48.8
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 2.8e-14 82.8 86 48.8
SGA_v2.0_scaffold206G41814 Striga asiatica HOM05D003779 ORTHO05D002678 2.8e-14 82.8 92 48.9
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 3.6e-14 82.4 92 47.8
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 4.8e-14 82.0 86 48.8
Sc08g0004970 Simmondsia chinensis HOM05D003779 ORTHO05D002678 4.8e-14 82.0 86 52.3
Actinidia38339 Actinidia chinensis HOM05D003779 ORTHO05D002678 6.2e-14 81.6 77 50.6
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 1.1e-13 80.9 86 47.7
Phvul.003G157600 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 1.4e-13 80.5 96 45.8
VMungo1215G0704 Vigna mungo HOM05D003779 ORTHO05D002678 1.4e-13 80.5 96 44.8
Aqoxy7G03464 Aquilegia oxysepala HOM05D003779 ORTHO05D002678 1.8e-13 80.1 91 46.2
A10p16130 Brassica napus HOM05D003779 ORTHO05D002678 3.1e-13 79.3 108 46.3
BraA10t43616Z Brassica rapa HOM05D003779 ORTHO05D002678 3.1e-13 79.3 108 46.3
AT5G58040 Arabidopsis thaliana HOM05D003779 ORTHO05D002678 4.0e-13 79.0 94 53.2
Thhalv10012479m.g Eutrema salsugineum HOM05D003779 ORTHO05D002678 4.0e-13 79.0 90 52.2
BcaB01g04473 Brassica carinata HOM05D003779 ORTHO05D002678 5.3e-13 78.6 92 50.0
C03p14630 Brassica napus HOM05D003779 ORTHO05D002678 5.3e-13 78.6 91 51.6
Carub.0008s1859 Capsella rubella HOM05D003779 ORTHO05D002678 6.9e-13 78.2 91 50.5
AUR62039744 Chenopodium quinoa HOM05D003779 ORTHO05D002678 6.9e-13 78.2 96 46.9
ATR0739G197 Amborella trichopoda HOM05D003779 ORTHO05D002678 1.2e-12 77.4 92 44.6
EL10Ac8g18849 Beta vulgaris HOM05D003779 ORTHO05D002678 1.5e-12 77.0 96 47.9
Sp6g19720 Schrenkiella parvula HOM05D003779 ORTHO05D002678 1.5e-12 77.0 92 50.0
AL8G34140 Arabidopsis lyrata HOM05D003779 ORTHO05D002678 2.0e-12 76.6 92 48.9
SGA_v2.0_scaffold387G50508 Striga asiatica HOM05D003779 ORTHO05D002678 2.0e-12 76.6 86 48.8
BolC9t57849H Brassica oleracea HOM05D003779 ORTHO05D002678 2.6e-12 76.3 92 48.9
unitig_0.g2698 Utricularia gibba HOM05D003779 ORTHO05D002678 3.4e-12 75.9 86 46.5
BolC3t13903H Brassica oleracea HOM05D003779 ORTHO05D002678 4.5e-12 75.5 85 51.8
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 4.5e-12 75.5 86 51.2
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 7.6e-12 74.7 96 45.8
Migut.J01330 Erythranthe guttata HOM05D003779 ORTHO05D002678 7.6e-12 74.7 145 38.6
Gohir.A05G051500 Gossypium hirsutum HOM05D003779 ORTHO05D002678 7.6e-12 74.7 90 45.6
BraA03t10557Z Brassica rapa HOM05D003779 ORTHO05D002678 9.9e-12 74.3 89 49.4
Actinidia04285 Actinidia chinensis HOM05D003779 ORTHO05D002678 1.3e-11 73.9 88 44.3
A03p12430 Brassica napus HOM05D003779 ORTHO05D002678 1.3e-11 73.9 91 48.4
BcaC04g19912 Brassica carinata HOM05D003779 ORTHO05D002678 2.9e-11 72.8 92 47.8
Ah.14g078430 Amaranthus hybridus HOM05D003779 ORTHO05D002678 3.8e-11 72.4 95 49.5
C09p49960 Brassica napus HOM05D003779 ORTHO05D002678 4.9e-11 72.0 92 46.7
THA.LOC104817824 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 1.4e-10 70.5 94 46.8
CDE05G1362 Ceratophyllum demersum HOM05D003779 ORTHO05D002678 1.9e-10 70.1 92 48.9
SHI09372 Sapria himalayana HOM05D002738 ORTHO05D000023 2.4e-10 69.7 43 83.7
BcaB08g36155 Brassica carinata HOM05D003779 ORTHO05D002678 3.2e-10 69.3 93 46.2
SHI06776 Sapria himalayana HOM05D000023 ORTHO05D000014 7.1e-10 68.2 40 82.5
MBI15_g10629_MAGBIO Magnolia biondii HOM05D003779 ORTHO05D002678 1.2e-09 67.4 93 46.2
PSO170G5719 Papaver somniferum HOM05D003779 ORTHO05D002678 1.6e-09 67.0 92 42.4
SHI12442 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-09 67.0 39 82.1
SHI09226 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-09 66.6 40 80.0
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 2.1e-09 66.6 94 45.7
SHI30034 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-09 66.2 40 80.0
SHI34855 Sapria himalayana HOM05D000023 ORTHO05D000014 4.6e-09 65.5 38 81.6
SHI27781 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 64.3 40 77.5
SHI17552 Sapria himalayana HOM05D000023 ORTHO05D006067 2.3e-08 63.2 33 90.9
SHI18325 Sapria himalayana HOM05D000023 ORTHO05D000014 2.3e-08 63.2 37 81.1
THA.LOC104813541 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 2.3e-08 63.2 88 45.5
SHI27650 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-08 62.8 49 59.2
SHI34909 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-08 62.8 37 78.4
SHI24935 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-08 62.4 40 77.5
SHI26408 Sapria himalayana HOM05D000023 ORTHO05D000014 3.9e-08 62.4 36 83.3
SHI08066 Sapria himalayana HOM05D005592 ORTHO05D006067 5.1e-08 62.0 36 83.3
SHI01277 Sapria himalayana HOM05D000023 ORTHO05D000014 6.7e-08 61.6 33 90.9
SHI26730 Sapria himalayana HOM05D000023 ORTHO05D000014 8.7e-08 61.2 40 77.5
DCAR_015453 Daucus carota HOM05D003779 ORTHO05D002678 1.1e-07 60.8 82 41.5
Sabra18G0093100 Salix brachista HOM05D003779 ORTHO05D002678 1.1e-07 60.8 73 47.9
SHI02593 Sapria himalayana HOM05D000023 ORTHO05D002678 1.1e-07 60.8 36 77.8
SHI20910 Sapria himalayana HOM05D001270 ORTHO05D001099 1.1e-07 60.8 34 85.3
SHI21623 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-07 60.8 41 73.2
SHI10100 Sapria himalayana HOM05D000023 ORTHO05D002678 1.5e-07 60.5 34 85.3
SHI17472 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-07 60.5 36 80.6
SHI03807 Sapria himalayana HOM05D000105 ORTHO05D000014 1.9e-07 60.1 40 75.0
SHI42686 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-07 60.1 40 77.5
SHI03272 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-07 59.7 38 71.1
SHI05599 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-07 59.7 35 82.9
SHI11644 Sapria himalayana HOM05D004019 ORTHO05D000014 2.5e-07 59.7 36 80.6
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 2.5e-07 59.7 39 74.4
SHI08270 Sapria himalayana HOM05D000023 ORTHO05D000014 4.3e-07 58.9 34 79.4
SHI03751 Sapria himalayana HOM05D000023 ORTHO05D000014 5.6e-07 58.5 35 80.0
SHI17236 Sapria himalayana HOM05D000023 ORTHO05D000014 7.4e-07 58.2 38 73.7
SHI22419 Sapria himalayana HOM05D000442 ORTHO05D001979 7.4e-07 58.2 35 77.1
DCAR_020882 Daucus carota HOM05D003779 ORTHO05D002678 9.6e-07 57.8 85 38.8
SHI00813 Sapria himalayana HOM05D000023 ORTHO05D000014 9.6e-07 57.8 37 75.7
SHI00601 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-06 57.4 37 75.7
SHI21674 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-06 57.4 37 73.0
Zm00001eb055800 Zea mays HOM05D003779 ORTHO05D002678 1.3e-06 57.4 97 40.2
SHI16914 Sapria himalayana HOM05D003924 ORTHO05D005216 1.6e-06 57.0 34 85.3
SHI12365 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.6 35 80.0
SHI28788 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.6 36 80.6
SHI46863 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.6 40 70.0
SalBow1G3877 Salvia bowleyana HOM05D003779 ORTHO05D002678 2.8e-06 56.2 92 39.1
SHI39263 Sapria himalayana HOM05D000023 ORTHO05D002678 2.8e-06 56.2 33 78.8
SHI28201 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-06 55.1 33 81.8
SHI07568 Sapria himalayana HOM05D001092 ORTHO05D000923 8.1e-06 54.7 34 76.5
SHI35702 Sapria himalayana HOM05D000023 ORTHO05D002678 8.1e-06 54.7 33 78.8


User provided reference genes

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