Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02623 Sapria himalayana HOM05D003779 ORTHO05D002678 9.8e-162 573.5 319 100.0
Manes.14G111700 Manihot esculenta HOM05D003779 ORTHO05D002678 1.8e-35 154.1 287 40.1
Manes.06G037900 Manihot esculenta HOM05D003779 ORTHO05D002678 4.3e-32 142.9 277 40.1
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 1.1e-22 111.7 285 38.9
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 1.5e-21 107.8 278 36.7
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 2.0e-21 107.5 278 36.3
Oeu050477.1 Olea europaea HOM05D003779 ORTHO05D002678 4.9e-20 102.8 288 34.4
MD02G1009900 Malus domestica HOM05D003779 ORTHO05D002678 6.4e-20 102.4 288 36.1
Potri.018G110100 Populus trichocarpa HOM05D003779 ORTHO05D002678 6.4e-20 102.4 280 36.1
Glyma.15G205600 Glycine max HOM05D003779 ORTHO05D002678 1.1e-19 101.7 262 36.3
CiPaw.16G114900 Carya illinoinensis HOM05D003779 ORTHO05D002678 1.9e-19 100.9 315 33.0
GSVIVG01023597001 Vitis vinifera HOM05D003779 ORTHO05D002678 7.1e-19 99.0 280 37.5
VMungo1309G0106 Vigna mungo HOM05D003779 ORTHO05D002678 1.2e-18 98.2 276 36.2
CiPaw.15G174200 Carya illinoinensis HOM05D003779 ORTHO05D002678 7.8e-18 95.5 303 34.0
Phvul.009G194000 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 1.3e-17 94.7 290 35.2
Sabra18G0093100 Salix brachista HOM05D003779 ORTHO05D002678 3.0e-17 93.6 284 35.2
CSS0005827 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.9e-16 90.9 143 49.7
ClCG06G012240 Citrullus lanatus HOM05D003779 ORTHO05D002678 4.3e-16 89.7 317 35.0
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 5.6e-16 89.4 334 32.0
Gorai.013G217400 Gossypium raimondii HOM05D003779 ORTHO05D002678 7.3e-16 89.0 286 36.0
PGR102G2779 Punica granatum HOM05D003779 ORTHO05D002678 7.3e-16 89.0 275 34.5
Gohir.D13G191400 Gossypium hirsutum HOM05D003779 ORTHO05D002678 9.5e-16 88.6 286 36.0
MELO3C010242.2 Cucumis melo HOM05D003779 ORTHO05D002678 1.2e-15 88.2 320 32.5
Cfa020847 Carpinus fangiana HOM05D003779 ORTHO05D002678 1.6e-15 87.8 293 35.5
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 1.6e-15 87.8 362 32.3
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 1.6e-15 87.8 337 31.5
Haze_19235 Corylus avellana HOM05D003779 ORTHO05D002678 2.1e-15 87.4 289 35.3
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 2.1e-15 87.4 298 33.9
COL.COLO4_18776 Corchorus olitorius HOM05D003779 ORTHO05D002678 3.6e-15 86.7 300 34.3
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 4.7e-15 86.3 292 34.9
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 6.2e-15 85.9 138 49.3
CsaV3_1G028740 Cucumis sativus L. HOM05D003779 ORTHO05D002678 6.2e-15 85.9 320 32.5
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 6.2e-15 85.9 119 51.3
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 8.1e-15 85.5 338 30.8
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 8.1e-15 85.5 293 33.1
A03p12430 Brassica napus HOM05D003779 ORTHO05D002678 1.1e-14 85.1 264 34.5
SGA_v2.0_scaffold206G41814 Striga asiatica HOM05D003779 ORTHO05D002678 1.1e-14 85.1 306 32.7
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 1.8e-14 84.3 119 48.7
Glyma.09G097600 Glycine max HOM05D003779 ORTHO05D002678 6.8e-14 82.4 273 33.7
Thecc.09G033700 Theobroma cacao HOM05D003779 ORTHO05D002678 1.2e-13 81.6 108 53.7
Actinidia38679 Actinidia chinensis HOM05D003779 ORTHO05D002678 2.0e-13 80.9 135 49.6
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 2.0e-13 80.9 296 33.8
Ciclev10007258m.g Citrus clementina HOM05D003779 ORTHO05D002678 3.4e-13 80.1 290 32.1
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 4.4e-13 79.7 204 38.2
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 1.7e-12 77.8 160 45.0
FAN19G1766 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.7e-12 77.8 279 33.0
Psat1g022120 Pisum sativum HOM05D003779 ORTHO05D002678 2.2e-12 77.4 291 32.6
Dinv41398 Davidia involucrata HOM05D003779 ORTHO05D002678 3.7e-12 76.6 348 31.3
FAN28G2365 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.9e-12 76.3 280 32.9
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 6.4e-12 75.9 306 35.0
Actinidia04285 Actinidia chinensis HOM05D003779 ORTHO05D002678 8.4e-12 75.5 165 42.4
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 8.4e-12 75.5 354 31.1
Dinv43216 Davidia involucrata HOM05D003779 ORTHO05D002678 8.4e-12 75.5 354 31.1
FvH4_1g01180 Fragaria vesca HOM05D003779 ORTHO05D002678 8.4e-12 75.5 283 32.5
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 1.1e-11 75.1 339 30.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.1e-11 75.1 280 32.1
Duzib168G2294 Durio zibethinus HOM05D003779 ORTHO05D002678 1.4e-11 74.7 299 32.4
SGA_v2.0_scaffold387G50508 Striga asiatica HOM05D003779 ORTHO05D002678 1.9e-11 74.3 344 31.4
Sed0010991 Sechium edule HOM05D003779 ORTHO05D002678 2.4e-11 73.9 292 31.2
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 5.4e-11 72.8 319 32.0
Oeu026546.1 Olea europaea HOM05D003779 ORTHO05D002678 9.2e-11 72.0 150 40.7
Oeu026547.1 Olea europaea HOM05D003779 ORTHO05D002678 9.2e-11 72.0 150 40.7
Gorai.001G031400 Gossypium raimondii HOM05D003779 ORTHO05D002678 1.6e-10 71.2 286 30.8
TAR625G1002 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.6e-10 71.2 149 42.3
Gorai.009G054800 Gossypium raimondii HOM05D003779 ORTHO05D002678 2.1e-10 70.9 268 32.1
Gohir.D05G053000 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.7e-10 70.5 269 32.7
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 4.6e-10 69.7 359 30.4
Duzib187G1590 Durio zibethinus HOM05D003779 ORTHO05D002678 6.0e-10 69.3 289 31.1
Gohir.A13G184900 Gossypium hirsutum HOM05D003779 ORTHO05D002678 6.0e-10 69.3 284 31.7
QL02p092676 Quercus lobata HOM05D003779 ORTHO05D002678 7.8e-10 68.9 356 30.9
Gohir.A05G051500 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.0e-09 68.6 278 34.5
Gohir.D07G030200 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.0e-09 68.6 300 29.7
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 1.7e-09 67.8 265 34.0
VMungo1215G0704 Vigna mungo HOM05D003779 ORTHO05D002678 1.7e-09 67.8 260 29.6
TPR.G35880 Trifolium pratense HOM05D003779 ORTHO05D002678 2.3e-09 67.4 277 31.4
HanXRQChr12g0357201 Helianthus annuus HOM05D003779 ORTHO05D002678 3.0e-09 67.0 275 32.7
unitig_0.g2698 Utricularia gibba HOM05D003779 ORTHO05D002678 6.6e-09 65.9 306 29.1
Zm00001eb215820 Zea mays HOM05D003779 ORTHO05D002678 8.6e-09 65.5 262 33.2
Gohir.A07G026300 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.5e-08 64.7 287 29.6
MBI15_g10629_MAGBIO Magnolia biondii HOM05D003779 ORTHO05D002678 1.5e-08 64.7 345 29.3
Rhsim01G0045400 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.9e-08 64.3 289 31.1
Rhsim01G0036200 Rhododendron simsii HOM05D003779 ORTHO05D002678 3.3e-08 63.5 284 29.6
CARHR271850 Cardamine hirsuta HOM05D003779 ORTHO05D002678 4.3e-08 63.2 114 44.7
FAN26G3236 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.3e-08 63.2 286 31.8
Os03g0725050 Oryza sativa ssp. japonica HOM05D003779 ORTHO05D002678 4.3e-08 63.2 149 42.3
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 4.3e-08 63.2 306 29.7
BraA03t10557Z Brassica rapa HOM05D003779 ORTHO05D002678 7.3e-08 62.4 267 29.2
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 7.3e-08 62.4 290 30.7
DCAR_019379 Daucus carota HOM05D003779 ORTHO05D002678 9.6e-08 62.0 262 29.8
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 9.6e-08 62.0 286 31.1
SalBow1G3877 Salvia bowleyana HOM05D003779 ORTHO05D002678 9.6e-08 62.0 124 40.3
Zm00001eb055800 Zea mays HOM05D003779 ORTHO05D002678 9.6e-08 62.0 141 39.7
TAR636G1028 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.2e-07 61.6 149 40.3
Aa31LG3G13870 Aethionema arabicum HOM05D003779 ORTHO05D002678 1.6e-07 61.2 294 29.9
Lalb_Chr08g0233951 Lupinus albus HOM05D003779 ORTHO05D002678 2.8e-07 60.5 266 30.8
Lalb_Chr08g0234021 Lupinus albus HOM05D003779 ORTHO05D002678 2.8e-07 60.5 266 30.8
Migut.J01330 Erythranthe guttata HOM05D003779 ORTHO05D002678 8.1e-07 58.9 350 25.7
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea HOM05D003779 ORTHO05D002678 1.8e-06 57.8 297 30.0
BcaB01g04473 Brassica carinata HOM05D003779 ORTHO05D002678 5.2e-06 56.2 265 32.5
C03p14630 Brassica napus HOM05D003779 ORTHO05D002678 5.2e-06 56.2 269 31.6
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea HOM05D003779 ORTHO05D002678 6.8e-06 55.8 297 29.6


User provided reference genes

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