Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01359 Sapria himalayana HOM05D000392 ORTHO05D000610 5.7e-18 93.2 47 100.0
CiPaw.15G077200 Carya illinoinensis HOM05D000392 ORTHO05D000610 1.8e-11 71.6 46 73.9
HanXRQChr03g0076611 Helianthus annuus HOM05D000050 ORTHO05D000610 2.0e-10 68.2 44 70.5
CiPaw.16G077300 Carya illinoinensis HOM05D000392 ORTHO05D000610 4.4e-10 67.0 46 69.6
CiPaw.16G084200 Carya illinoinensis HOM05D000392 ORTHO05D000610 4.4e-10 67.0 46 69.6
SHI34594 Sapria himalayana HOM05D000392 ORTHO05D000610 5.7e-10 66.6 45 73.3
SHI26893 Sapria himalayana HOM05D000392 ORTHO05D000610 1.3e-09 65.5 47 70.2
Oeu026008.1 Olea europaea HOM05D000392 ORTHO05D000610 2.2e-09 64.7 46 67.4
QL07p048782 Quercus lobata HOM05D000392 ORTHO05D000610 2.2e-09 64.7 46 67.4
Oeu011643.1 Olea europaea HOM05D000392 ORTHO05D000610 2.8e-09 64.3 46 67.4
FvH4_2g34691 Fragaria vesca HOM05D000392 ORTHO05D000610 3.7e-09 63.9 46 63.0
Oeu014867.1 Olea europaea HOM05D000392 ORTHO05D000610 3.7e-09 63.9 46 67.4
Oeu042015.1 Olea europaea HOM05D000392 ORTHO05D000610 3.7e-09 63.9 46 67.4
CANSAT25G2122 Cannabis sativa HOM05D000392 ORTHO05D000610 6.3e-09 63.2 46 60.9
SHI18883 Sapria himalayana HOM05D000392 ORTHO05D000610 6.3e-09 63.2 47 68.1
ECA248G3881 Erigeron canadensis HOM05D000392 ORTHO05D000610 1.8e-08 61.6 46 63.0
FvH4_5g21901 Fragaria vesca HOM05D000392 ORTHO05D000610 1.8e-08 61.6 46 60.9
Oeu008061.1 Olea europaea HOM05D000392 ORTHO05D000610 1.8e-08 61.6 46 63.0
QL08p053765 Quercus lobata HOM05D000392 ORTHO05D000610 1.8e-08 61.6 46 60.9
SHI05255 Sapria himalayana HOM05D000392 ORTHO05D000610 1.8e-08 61.6 46 69.6
FvH4_5g37591 Fragaria vesca HOM05D000392 ORTHO05D000610 2.4e-08 61.2 46 60.9
SHI21714 Sapria himalayana HOM05D000392 ORTHO05D000610 2.4e-08 61.2 41 68.3
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 3.1e-08 60.8 46 63.0
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 3.1e-08 60.8 46 63.0
ECA234G2153 Erigeron canadensis HOM05D000392 ORTHO05D000610 3.1e-08 60.8 46 63.0
ECA236G3702 Erigeron canadensis HOM05D000392 ORTHO05D000610 3.1e-08 60.8 46 63.0
Potri.001G199250 Populus trichocarpa HOM05D000392 ORTHO05D000610 3.1e-08 60.8 43 67.4
SHI20109 Sapria himalayana HOM05D000392 ORTHO05D000610 3.1e-08 60.8 43 65.1
ECA240G2016 Erigeron canadensis HOM05D000392 ORTHO05D000610 4.1e-08 60.5 46 63.0
PSO357G0088 Papaver somniferum HOM05D000392 ORTHO05D000610 4.1e-08 60.5 45 57.8
CANSAT01G0359 Cannabis sativa HOM05D000392 ORTHO05D000610 5.4e-08 60.1 46 58.7
ECA248G0847 Erigeron canadensis HOM05D000392 ORTHO05D000610 5.4e-08 60.1 43 65.1
Oeu046502.1 Olea europaea HOM05D000392 ORTHO05D000610 5.4e-08 60.1 46 63.0
Potri.007G065150 Populus trichocarpa HOM05D000392 ORTHO05D000610 5.4e-08 60.1 46 56.5
SHI03574 Sapria himalayana HOM05D000392 ORTHO05D000610 5.4e-08 60.1 45 62.2
Sopen03g008700 Solanum pennellii HOM05D000392 ORTHO05D000610 5.4e-08 60.1 46 60.9
PSO478G0470 Papaver somniferum HOM05D000392 ORTHO05D000610 7.0e-08 59.7 45 62.2
SHI21477 Sapria himalayana HOM05D000392 ORTHO05D000610 7.0e-08 59.7 46 60.9
PSO717G0113 Papaver somniferum HOM05D000392 ORTHO05D000610 9.1e-08 59.3 46 58.7
Potri.018G044500 Populus trichocarpa HOM05D000392 ORTHO05D000610 9.1e-08 59.3 46 60.9
Sopen04g024520 Solanum pennellii HOM05D000392 ORTHO05D000610 9.1e-08 59.3 46 58.7
Sopen12g009220 Solanum pennellii HOM05D000392 ORTHO05D002065 9.1e-08 59.3 46 58.7
SHI19120 Sapria himalayana HOM05D000392 ORTHO05D000610 1.2e-07 58.9 44 63.6
Sopen09g025520 Solanum pennellii HOM05D000392 ORTHO05D000610 1.2e-07 58.9 46 60.9
CANSAT11G2313 Cannabis sativa HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
RcHm_v2.0_Chr1g0344341 Rosa chinensis HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen01g026830 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen04g006280 Solanum pennellii HOM05D000392 ORTHO05D002065 1.6e-07 58.5 46 56.5
Sopen07g005560 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen08g025430 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 1.6e-07 58.5 46 58.7
Sopen09g029450 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-07 58.5 46 56.5
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 1.6e-07 58.5 46 56.5
Sopen11g025120 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen12g021680 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-07 58.5 46 58.7
Sopen05g014670 Solanum pennellii HOM05D000392 ORTHO05D000610 2.0e-07 58.2 46 58.7
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-07 58.2 46 58.7
TPR.G29492 Trifolium pratense HOM05D000392 ORTHO05D000610 2.0e-07 58.2 46 60.9
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 2.7e-07 57.8 46 58.7
CANSAT80G2002 Cannabis sativa HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 56.5
Oeu045631.1 Olea europaea HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 63.0
Oeu046418.1 Olea europaea HOM05D000392 ORTHO05D000610 3.5e-07 57.4 41 68.3
PSO398G0017 Papaver somniferum HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 58.7
SHI14136 Sapria himalayana HOM05D000392 ORTHO05D000610 3.5e-07 57.4 41 63.4
Sopen01g001570 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 3.5e-07 57.4 46 56.5
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen05g014110 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen06g014820 Solanum pennellii HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 58.7
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen08g016220 Solanum pennellii HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 56.5
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen11g010450 Solanum pennellii HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 58.7
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen12g019060 Solanum pennellii HOM05D000392 ORTHO05D000610 3.5e-07 57.4 46 56.5
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 3.5e-07 57.4 46 56.5
SHI07427 Sapria himalayana HOM05D000392 ORTHO05D000610 4.5e-07 57.0 43 58.1
SHI14676 Sapria himalayana HOM05D000392 ORTHO05D000610 4.5e-07 57.0 43 62.8
SHI16595 Sapria himalayana HOM05D000392 ORTHO05D000610 4.5e-07 57.0 44 61.4
Sopen01g006120 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
Sopen02g023000 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
Sopen04g006270 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 54.3
Sopen04g014000 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
Sopen05g015550 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
Sopen10g017660 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
Sopen11g021220 Solanum pennellii HOM05D000392 ORTHO05D000610 4.5e-07 57.0 46 56.5
PSO017G3011 Papaver somniferum HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
SHI07191 Sapria himalayana HOM05D000392 ORTHO05D000610 5.9e-07 56.6 43 62.8
Sopen01g017660 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen01g021430 Solanum pennellii HOM05D002156 ORTHO05D002328 5.9e-07 56.6 46 56.5
Sopen01g028820 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen02g006050 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen03g006790 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen03g014390 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen04g013070 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen04g029050 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen05g027010 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen05g029850 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen06g006160 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen06g028780 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen08g023940 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen10g028640 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen10g030140 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen11g024410 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen12g007910 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen12g008370 Solanum pennellii HOM05D000392 ORTHO05D000610 5.9e-07 56.6 46 56.5
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 7.7e-07 56.2 46 56.5
Sopen03g013220 Solanum pennellii HOM05D000392 ORTHO05D000610 7.7e-07 56.2 46 58.7
Sopen08g005180 Solanum pennellii HOM05D000392 ORTHO05D000610 7.7e-07 56.2 46 56.5
Sopen11g015810 Solanum pennellii HOM05D000392 ORTHO05D000610 7.7e-07 56.2 46 56.5
MELO3C032127.2 Cucumis melo HOM05D000392 ORTHO05D000610 1.0e-06 55.8 41 63.4
PSO832G2076 Papaver somniferum HOM05D000392 ORTHO05D000610 1.0e-06 55.8 46 54.3
Potri.001G264200 Populus trichocarpa HOM05D000392 ORTHO05D000610 1.0e-06 55.8 46 56.5
Sopen02g005490 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-06 55.8 46 56.5
Sopen02g016350 Solanum pennellii HOM05D000392 ORTHO05D000610 1.0e-06 55.8 46 56.5
Sopen04g024700 Solanum pennellii HOM05D000392 ORTHO05D000610 1.0e-06 55.8 46 56.5
Sopen07g029700 Solanum pennellii HOM05D000392 ORTHO05D002065 1.0e-06 55.8 46 56.5
Sopen11g011220 Solanum pennellii HOM05D000392 ORTHO05D000610 1.0e-06 55.8 46 58.7
PSO339G3170 Papaver somniferum HOM05D000392 ORTHO05D000610 1.3e-06 55.5 46 56.5
PSO541G4311 Papaver somniferum HOM05D000392 ORTHO05D000610 1.3e-06 55.5 46 54.3
Sopen05g026500 Solanum pennellii HOM05D000392 ORTHO05D000610 1.3e-06 55.5 46 56.5
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-06 55.5 46 56.5
Sopen08g013580 Solanum pennellii HOM05D000392 ORTHO05D000610 1.3e-06 55.5 44 59.1
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-06 55.5 46 56.5
HanXRQChr06g0175871 Helianthus annuus HOM05D000392 ORTHO05D000610 1.7e-06 55.1 46 58.7
PSO170G3566 Papaver somniferum HOM05D000392 ORTHO05D000610 1.7e-06 55.1 46 54.3
Sopen03g024570 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-06 55.1 46 54.3
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-06 55.1 46 56.5
Oeu015036.1 Olea europaea HOM05D000392 ORTHO05D000610 2.2e-06 54.7 41 65.9
PSO478G4909 Papaver somniferum HOM05D000392 ORTHO05D000610 2.2e-06 54.7 46 52.2
Sopen03g030570 Solanum pennellii HOM05D000392 ORTHO05D000610 2.2e-06 54.7 46 56.5
Sopen08g012490 Solanum pennellii HOM05D000392 ORTHO05D000610 2.2e-06 54.7 46 56.5
arahy.Tifrunner.gnm1.ann1.W44XNY Arachis hypogaea HOM05D000392 ORTHO05D001257 2.9e-06 54.3 46 56.5
PSO832G3593 Papaver somniferum HOM05D000392 ORTHO05D000610 2.9e-06 54.3 46 52.2
SHI07361 Sapria himalayana HOM05D002388 ORTHO05D000131 3.8e-06 53.9 39 66.7
Sopen02g005720 Solanum pennellii HOM05D000392 ORTHO05D000610 3.8e-06 53.9 46 54.3
Sopen05g009350 Solanum pennellii HOM05D000002 ORTHO05D002065 3.8e-06 53.9 46 52.2
Sopen05g026300 Solanum pennellii HOM05D000392 ORTHO05D000610 3.8e-06 53.9 43 58.1
MELO3C030254.2 Cucumis melo HOM05D000392 ORTHO05D000610 5.0e-06 53.5 39 61.5
Sopen01g028600 Solanum pennellii HOM05D000392 ORTHO05D000610 5.0e-06 53.5 46 54.3
Sopen02g006630 Solanum pennellii HOM05D000392 ORTHO05D000610 5.0e-06 53.5 46 54.3
MD00G1036200 Malus domestica HOM05D000392 ORTHO05D000610 6.5e-06 53.1 46 50.0
SHI05136 Sapria himalayana HOM05D000004 ORTHO05D000002 6.5e-06 53.1 46 58.7
SHI20712 Sapria himalayana HOM05D000392 ORTHO05D000610 6.5e-06 53.1 43 60.5
SHI38904 Sapria himalayana HOM05D000392 ORTHO05D000610 6.5e-06 53.1 43 60.5
Sopen05g025110 Solanum pennellii HOM05D000392 ORTHO05D000610 6.5e-06 53.1 46 54.3
Sopen10g024550 Solanum pennellii HOM05D000392 ORTHO05D000610 6.5e-06 53.1 46 54.3
PSO063G6139 Papaver somniferum HOM05D000392 ORTHO05D000610 8.5e-06 52.8 46 50.0
PSO357G0244 Papaver somniferum HOM05D000392 ORTHO05D000610 8.5e-06 52.8 46 50.0
SHI08590 Sapria himalayana HOM05D000392 ORTHO05D000610 8.5e-06 52.8 43 58.1
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 8.5e-06 52.8 37 64.9
Sopen08g004970 Solanum pennellii HOM05D000392 ORTHO05D000610 8.5e-06 52.8 46 52.2
Sopen11g022050 Solanum pennellii HOM05D000006 ORTHO05D000001 8.5e-06 52.8 46 52.2


User provided reference genes

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