Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00911 Sapria himalayana HOM05D002282 ORTHO05D002403 1.6e-64 249.2 118 100.0
Atru.chr4.2932 Acer truncatum HOM05D002282 ORTHO05D002403 1.6e-13 79.7 84 48.8
Sabra10G0004600 Salix brachista HOM05D002282 ORTHO05D002403 2.4e-12 75.9 82 47.6
Potri.010G005400 Populus trichocarpa HOM05D002282 ORTHO05D002403 5.3e-12 74.7 68 52.9
GSVIVG01035079001 Vitis vinifera HOM05D002282 ORTHO05D002403 5.3e-12 74.7 78 48.7
Manes.15G008900 Manihot esculenta HOM05D002282 ORTHO05D002403 9.0e-12 73.9 113 38.9
Rhsim02G0006600 Rhododendron simsii HOM05D002282 ORTHO05D002403 1.2e-11 73.6 89 46.1
Eucgr.A01301 Eucalyptus grandis HOM05D002282 ORTHO05D002403 3.4e-11 72.0 95 42.1
vmacro13795 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 4.5e-11 71.6 89 44.9
arahy.Tifrunner.gnm1.ann1.3PI56D Arachis hypogaea HOM05D002282 ORTHO05D002403 5.8e-11 71.2 89 43.8
MBI19_g05149_MAGBIO Magnolia biondii HOM05D002282 ORTHO05D002403 5.8e-11 71.2 65 46.2
CANSAT35G1122 Cannabis sativa HOM05D002282 ORTHO05D002403 7.6e-11 70.9 101 41.6
Glyma.07G244100 Glycine max HOM05D002282 ORTHO05D002403 7.6e-11 70.9 89 43.8
Gohir.D09G062700 Gossypium hirsutum HOM05D002282 ORTHO05D002403 9.9e-11 70.5 95 41.1
Sed0017061 Sechium edule HOM05D002282 ORTHO05D002403 1.3e-10 70.1 98 41.8
ATR0693G215 Amborella trichopoda HOM05D002282 ORTHO05D002403 2.2e-10 69.3 72 44.4
CSS0020497 Camellia sinensis var. sinensis HOM05D002282 ORTHO05D002403 2.2e-10 69.3 107 40.2
Psat4g024880 Pisum sativum HOM05D002282 ORTHO05D002403 2.9e-10 68.9 71 47.9
vmacro02293 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 3.8e-10 68.6 87 46.0
Actinidia02885 Actinidia chinensis HOM05D002282 ORTHO05D002403 4.9e-10 68.2 74 45.9
Actinidia14272 Actinidia chinensis HOM05D002282 ORTHO05D002403 4.9e-10 68.2 74 45.9
Glyma.17G029800 Glycine max HOM05D002282 ORTHO05D002403 6.4e-10 67.8 94 41.5
HanXRQChr03g0084951 Helianthus annuus HOM05D002282 ORTHO05D002403 6.4e-10 67.8 80 42.5
Ciclev10004544m.g Citrus clementina HOM05D002282 ORTHO05D002403 8.4e-10 67.4 79 45.6
FAN02G0515 Fragaria x ananassa HOM05D002282 ORTHO05D002403 8.4e-10 67.4 67 49.3
FAN05G0042 Fragaria x ananassa HOM05D002282 ORTHO05D002403 8.4e-10 67.4 67 49.3
TPR.G4827 Trifolium pratense HOM05D002282 ORTHO05D002403 8.4e-10 67.4 64 46.9
TAR365G0623 Trochodendron aralioides HOM05D002282 ORTHO05D002403 8.4e-10 67.4 64 50.0
Carub.0006s0971 Capsella rubella HOM05D002282 ORTHO05D002403 1.1e-09 67.0 84 42.9
Cc03_g01330 Coffea canephora HOM05D002282 ORTHO05D002403 1.1e-09 67.0 105 36.2
Thecc.04G291300 Theobroma cacao HOM05D002282 ORTHO05D002403 1.1e-09 67.0 89 42.7
EL10Ac3g04935 Beta vulgaris HOM05D002282 ORTHO05D002403 1.4e-09 66.6 94 41.5
AUR62035074 Chenopodium quinoa HOM05D002282 ORTHO05D002403 1.4e-09 66.6 88 44.3
Haze_04567 Corylus avellana HOM05D002282 ORTHO05D002403 1.4e-09 66.6 88 44.3
DCAR_027041 Daucus carota HOM05D002282 ORTHO05D002403 1.4e-09 66.6 106 37.7
Cfa006257 Carpinus fangiana HOM05D002282 ORTHO05D004557 1.9e-09 66.2 86 44.2
AUR62044456 Chenopodium quinoa HOM05D002282 ORTHO05D002403 2.4e-09 65.9 86 44.2
FvH4_6g31810 Fragaria vesca HOM05D002282 ORTHO05D002403 2.4e-09 65.9 67 47.8
PSO407G0173 Papaver somniferum HOM05D002282 ORTHO05D002403 2.4e-09 65.9 58 51.7
Sopen02g009400 Solanum pennellii HOM05D002282 ORTHO05D002403 2.4e-09 65.9 86 40.7
AT5G11240 Arabidopsis thaliana HOM05D002282 ORTHO05D002403 3.2e-09 65.5 65 47.7
BcaB08g37077 Brassica carinata HOM05D002282 ORTHO05D002403 3.2e-09 65.5 74 44.6
Ca_21469_v3 Cicer arietinum L. HOM05D002282 ORTHO05D002403 3.2e-09 65.5 56 55.4
CsaV3_6G022650 Cucumis sativus L. HOM05D002282 ORTHO05D002403 3.2e-09 65.5 60 51.7
FAN14G3556 Fragaria x ananassa HOM05D002282 ORTHO05D002403 3.2e-09 65.5 67 46.3
Lj5A688G9 Lonicera japonica HOM05D002282 ORTHO05D002403 3.2e-09 65.5 115 33.9
Prupe.1G129200 Prunus persica HOM05D002282 ORTHO05D002403 3.2e-09 65.5 78 44.9
Sp6g32320 Schrenkiella parvula HOM05D002282 ORTHO05D002403 3.2e-09 65.5 74 44.6
AL6G21870 Arabidopsis lyrata HOM05D002282 ORTHO05D002403 4.2e-09 65.1 84 41.7
Hund11944 Selenicereus undatus HOM05D002282 ORTHO05D002403 4.2e-09 65.1 64 50.0
MSTRG.10121 Avicennia marina HOM05D002282 ORTHO05D002403 5.5e-09 64.7 67 44.8
MSTRG.21910 Avicennia marina HOM05D002282 ORTHO05D002403 5.5e-09 64.7 67 44.8
FAN09G1184 Fragaria x ananassa HOM05D002282 ORTHO05D002403 5.5e-09 64.7 67 46.3
Lj4g0005439 Lotus japonicus HOM05D002282 ORTHO05D002403 5.5e-09 64.7 56 55.4
Lj4g0022588 Lotus japonicus HOM05D002282 ORTHO05D002403 5.5e-09 64.7 56 55.4
Medtr4g120740 Medicago truncatula HOM05D002282 ORTHO05D002403 5.5e-09 64.7 56 53.6
RcHm_v2.0_Chr4g0423831 Rosa chinensis HOM05D002282 ORTHO05D002403 5.5e-09 64.7 60 53.3
Dinv29708 Davidia involucrata HOM05D002282 ORTHO05D002403 7.1e-09 64.3 60 51.7
Solyc02g030080.4 Solanum lycopersicum HOM05D002282 ORTHO05D002403 7.1e-09 64.3 84 39.3
PGSC0003DMG400011805 Solanum tuberosum HOM05D002282 ORTHO05D002403 7.1e-09 64.3 85 41.2
BcaC04g19248 Brassica carinata HOM05D002282 ORTHO05D002403 9.3e-09 63.9 74 43.2
A10p26480 Brassica napus HOM05D002282 ORTHO05D002403 9.3e-09 63.9 74 43.2
C09p65630 Brassica napus HOM05D002282 ORTHO05D002403 9.3e-09 63.9 74 43.2
BolC9t59386H Brassica oleracea HOM05D002282 ORTHO05D002403 9.3e-09 63.9 74 43.2
BraA10t44705Z Brassica rapa HOM05D002282 ORTHO05D002403 9.3e-09 63.9 74 43.2
AUR62016160 Chenopodium quinoa HOM05D002282 ORTHO05D002403 9.3e-09 63.9 88 44.3
TWI09G1448 Tripterygium wilfordii HOM05D002282 ORTHO05D002403 9.3e-09 63.9 89 44.9
CDE05G3405 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 1.6e-08 63.2 77 42.9
CDE11G1255 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 1.6e-08 63.2 77 42.9
Thhalv10012983m.g Eutrema salsugineum HOM05D002282 ORTHO05D002403 1.6e-08 63.2 67 44.8
BcaNung01920 Brassica carinata HOM05D002282 ORTHO05D002403 2.1e-08 62.8 109 33.9
Nitab4.5_0000378g0050 Nicotiana tabacum HOM05D002282 ORTHO05D002403 2.1e-08 62.8 71 43.7
ClCG06G004860 Citrullus lanatus HOM05D002282 ORTHO05D002403 2.7e-08 62.4 60 50.0
Lsat_1_v5_gn_6_76141 Lactuca sativa HOM05D002282 ORTHO05D002403 2.7e-08 62.4 98 34.7
MD16G1161700 Malus domestica HOM05D002282 ORTHO05D002403 2.7e-08 62.4 60 50.0
Peaxi162Scf00065g01016 Petunia axillaris HOM05D002282 ORTHO05D002403 2.7e-08 62.4 66 45.5
Migut.G00119 Erythranthe guttata HOM05D002282 ORTHO05D002403 3.5e-08 62.0 89 40.4
THA.LOC104805829 Tarenaya hassleriana HOM05D002282 ORTHO05D002403 4.6e-08 61.6 108 33.3
Sc19g0003390 Simmondsia chinensis HOM05D002282 ORTHO05D002403 6.0e-08 61.2 74 41.9
CAN.G306.6 Capsicum annuum HOM05D002282 ORTHO05D002403 7.9e-08 60.8 71 43.7
Lj3A826G75 Lonicera japonica HOM05D002282 ORTHO05D002403 7.9e-08 60.8 81 39.5
PSO170G5250 Papaver somniferum HOM05D002282 ORTHO05D002403 1.0e-07 60.5 58 46.6
Nitab4.5_0001298g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 1.3e-07 60.1 71 40.8
A02p00910 Brassica napus HOM05D002282 ORTHO05D002403 1.8e-07 59.7 67 43.3
BraA02t05075Z Brassica rapa HOM05D002282 ORTHO05D002403 3.0e-07 58.9 67 41.8
Haze_01137 Corylus avellana HOM05D002282 ORTHO05D002403 3.0e-07 58.9 49 57.1
Nitab4.5_0004432g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 3.0e-07 58.9 60 45.0
Aa31LG3G15950 Aethionema arabicum HOM05D002282 ORTHO05D002403 3.9e-07 58.5 87 39.1
Lalb_Chr12g0201081 Lupinus albus HOM05D002282 ORTHO05D002403 3.9e-07 58.5 64 42.2
MD13G1161900 Malus domestica HOM05D002282 ORTHO05D002403 3.9e-07 58.5 60 50.0
Oeu006431.1 Olea europaea HOM05D002282 ORTHO05D002403 2.5e-06 55.8 58 46.6
HPP92_021476 Vanilla planifolia HOM05D002282 ORTHO05D002403 3.3e-06 55.5 78 37.2
ECA240G0914 Erigeron canadensis HOM05D002282 ORTHO05D002403 4.3e-06 55.1 76 39.5
Cfa015451 Carpinus fangiana HOM05D002282 ORTHO05D002403 5.6e-06 54.7 74 43.2
Cpa.g.sc9.113 Carica papaya HOM05D002282 ORTHO05D002403 7.4e-06 54.3 85 34.1


User provided reference genes

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