Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 9.7e-303 1042.7 545 100.0
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 9.0e-123 444.9 335 74.0
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 8.4e-121 438.3 336 74.1
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 1.5e-117 427.6 389 66.8
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 3.0e-110 403.3 270 79.6
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 8.7e-110 401.7 264 82.2
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 1.9e-109 400.6 282 77.0
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 3.3e-109 399.8 282 75.9
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 4.3e-109 399.4 286 75.2
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 7.4e-109 398.7 266 80.1
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 7.4e-109 398.7 267 78.3
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 9.6e-109 398.3 279 76.0
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 2.1e-108 397.1 271 77.5
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 2.1e-108 397.1 319 68.0
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 2.8e-108 396.7 266 80.5
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 4.8e-108 396.0 272 78.3
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 6.2e-108 395.6 303 71.6
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 1.1e-107 394.8 347 66.6
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 1.4e-107 394.4 266 80.8
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 1.4e-107 394.4 269 77.7
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 1.8e-107 394.0 272 79.0
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 1.8e-107 394.0 327 68.2
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 2.4e-107 393.7 269 77.3
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 3.1e-107 393.3 303 71.6
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 3.1e-107 393.3 270 78.9
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 5.3e-107 392.5 238 86.6
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 6.9e-107 392.1 326 68.4
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 9.0e-107 391.7 270 78.9
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 1.2e-106 391.3 274 78.8
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 2.0e-106 390.6 347 65.4
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 5.8e-106 389.0 282 75.5
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 5.8e-106 389.0 238 85.3
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 5.8e-106 389.0 290 73.8
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 9.9e-106 388.3 269 76.6
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 9.9e-106 388.3 348 64.9
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 9.9e-106 388.3 268 78.0
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.3e-105 387.9 275 76.7
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 1.7e-105 387.5 257 80.9
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 1.7e-105 387.5 282 75.2
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 2.2e-105 387.1 294 73.5
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 3.8e-105 386.3 253 83.0
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 4.9e-105 386.0 330 66.1
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 8.4e-105 385.2 275 75.3
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 1.4e-104 384.4 293 72.4
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 2.5e-104 383.6 282 74.8
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 2.5e-104 383.6 273 77.3
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 2.5e-104 383.6 266 77.8
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 3.2e-104 383.3 325 67.4
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 3.2e-104 383.3 300 70.7
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 5.5e-104 382.5 253 82.6
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 7.1e-104 382.1 336 64.6
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 2.1e-103 380.6 242 82.2
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 2.7e-103 380.2 264 78.4
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 4.6e-103 379.4 314 67.8
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 6.0e-103 379.0 280 74.6
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.0e-102 378.3 274 75.2
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 1.0e-102 378.3 242 81.8
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 3.0e-102 376.7 296 70.6
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 3.0e-102 376.7 246 82.1
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 5.1e-102 375.9 265 76.2
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 5.1e-102 375.9 278 75.2
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 5.1e-102 375.9 252 81.0
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 6.7e-102 375.6 258 79.5
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 1.5e-101 374.4 287 71.4
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 1.9e-101 374.0 267 76.8
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 3.3e-101 373.2 322 66.8
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 4.3e-101 372.9 238 83.6
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 5.6e-101 372.5 270 76.7
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 7.4e-101 372.1 329 66.3
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 7.4e-101 372.1 282 74.5
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 9.6e-101 371.7 238 83.6
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 9.6e-101 371.7 238 83.6
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 9.6e-101 371.7 329 66.0
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 1.3e-100 371.3 238 84.0
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 1.3e-100 371.3 325 66.5
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 2.1e-100 370.5 238 83.6
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 2.1e-100 370.5 279 72.0
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 2.8e-100 370.2 251 80.5
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 3.7e-100 369.8 238 83.2
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 4.8e-100 369.4 311 67.8
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 6.2e-100 369.0 238 82.4
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 8.2e-100 368.6 324 65.7
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 8.2e-100 368.6 238 83.6
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 2.0e-98 364.0 252 78.2
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 4.5e-98 362.8 310 66.8
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 1.7e-97 360.9 300 66.3
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 2.2e-97 360.5 272 74.3
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 3.8e-97 359.8 281 72.2
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 2.5e-96 357.1 229 83.4
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 7.9e-95 352.1 295 68.1
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 1.3e-94 351.3 251 75.3
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 3.9e-94 349.7 274 70.4
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 1.1e-93 348.2 289 70.6
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 2.2e-92 344.0 218 83.5
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 3.7e-92 343.2 294 66.7
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 9.0e-91 338.6 257 73.9
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 4.5e-90 336.3 247 72.1
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 8.5e-89 332.0 333 59.5
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 4.6e-87 326.2 234 74.4
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 6.1e-87 325.9 264 69.7
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 7.9e-87 325.5 279 64.2
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 7.7e-82 308.9 288 62.8
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 6.5e-81 305.8 320 58.1
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 1.4e-80 304.7 320 57.8
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 2.3e-78 297.4 248 66.9
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 3.1e-75 287.0 172 86.0
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 7.7e-74 282.3 236 66.1
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 1.4e-70 271.6 216 68.5
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 8.8e-70 268.9 235 65.5
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 6.5e-65 252.7 269 57.6
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 4.2e-64 250.0 226 61.5
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 6.3e-60 236.1 229 59.0
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 2.0e-58 231.1 228 63.2
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 5.9e-58 229.6 258 54.7
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 1.8e-54 218.0 295 49.8
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 1.5e-53 214.9 228 60.5
Os12g0137300 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 1.8e-51 208.0 180 68.3
SEGI_00968 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 6.8e-46 189.5 135 76.3
BcaC01g06300 Brassica carinata HOM05D005990 ORTHO05D007908 2.8e-39 167.5 105 85.7
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 8.9e-38 162.5 98 85.7
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 4.1e-35 153.7 142 64.1
SEGI_31484 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 2.0e-34 151.4 93 82.8
MD03G1219200 Malus domestica HOM05D005990 ORTHO05D007908 1.7e-33 148.3 204 52.0
CSS0033016 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 6.2e-31 139.8 126 62.7
CSS0043364 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 1.8e-30 138.3 126 61.9
HPP92_027973 Vanilla planifolia HOM05D005990 ORTHO05D007908 2.2e-28 131.3 90 75.6
HPP92_027972 Vanilla planifolia HOM05D005990 ORTHO05D007908 3.2e-19 100.9 80 65.0
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 8.6e-17 92.8 96 59.4
Solyc05g150137.1 Solanum lycopersicum HOM05D005990 ORTHO05D391672 1.8e-14 85.1 60 73.3
HanXRQChr12g0381681 Helianthus annuus HOM05D005990 ORTHO05D221923 8.4e-12 76.3 206 32.5
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 5.1e-09 67.0 43 76.7
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.9e-06 56.6 29 100.0


User provided reference genes

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