Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.7e-174 616.3 405 100.0
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 4.3e-138 495.4 359 78.3
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.1e-128 464.2 360 75.0
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.4e-125 453.0 404 68.8
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 1.9e-122 443.4 426 67.8
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 1.9e-122 443.4 426 67.8
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.5e-122 443.0 367 69.5
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 9.6e-122 441.0 367 69.2
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.6e-121 440.3 367 69.2
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.1e-121 439.9 398 65.6
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.1e-120 437.6 368 68.5
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 2.6e-119 433.0 364 67.9
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 7.6e-119 431.4 363 66.7
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.9e-119 431.0 277 81.9
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.9e-119 431.0 277 81.9
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 1.7e-118 430.3 362 68.2
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 2.2e-118 429.9 401 68.8
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 8.4e-118 427.9 275 81.1
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 2.4e-117 426.4 400 68.8
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.1e-116 423.3 281 79.4
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 2.1e-116 423.3 353 67.7
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 2.7e-116 422.9 424 65.8
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 6.0e-116 421.8 402 66.7
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 7.9e-116 421.4 358 69.8
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.8e-115 420.2 367 67.3
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 2.3e-115 419.9 364 71.4
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 2.3e-115 419.9 363 65.8
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 6.7e-115 418.3 405 62.5
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 8.7e-115 417.9 270 80.7
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.1e-114 417.5 357 67.2
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.1e-114 417.5 360 67.5
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 1.5e-114 417.2 365 66.6
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 3.3e-114 416.0 365 66.6
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.3e-113 414.1 419 66.6
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 2.1e-113 413.3 405 62.5
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 3.7e-113 412.5 356 67.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 4.8e-113 412.1 261 82.0
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 6.2e-113 411.8 359 72.1
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 6.2e-113 411.8 419 63.0
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 8.2e-113 411.4 388 63.4
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 2.4e-112 409.8 261 82.0
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 3.1e-112 409.5 356 66.9
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 5.3e-112 408.7 432 66.2
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 6.9e-112 408.3 287 75.3
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.2e-111 407.5 401 66.3
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 2.0e-111 406.8 267 80.1
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 5.8e-111 405.2 270 78.5
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 5.8e-111 405.2 278 77.7
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 5.8e-111 405.2 263 80.2
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 2.9e-110 402.9 360 63.9
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 2.9e-110 402.9 364 63.7
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 4.9e-110 402.1 363 66.7
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 4.9e-110 402.1 300 72.7
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 1.1e-109 401.0 272 76.5
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.9e-109 400.2 359 62.4
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.9e-109 400.2 369 63.7
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 2.5e-109 399.8 419 61.8
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 9.3e-109 397.9 264 79.5
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 9.3e-109 397.9 442 61.1
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 9.3e-109 397.9 317 70.0
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 1.6e-108 397.1 363 67.5
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 4.6e-108 395.6 281 73.0
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.0e-107 394.4 279 72.8
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 1.8e-107 393.7 280 76.4
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.8e-107 393.7 408 64.2
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 1.8e-107 393.7 266 77.8
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 2.3e-107 393.3 281 72.6
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 2.3e-107 393.3 281 72.6
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 2.3e-107 393.3 281 72.6
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 2.3e-107 393.3 372 61.0
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 3.0e-107 392.9 367 61.6
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 3.0e-107 392.9 269 76.6
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-106 390.6 281 74.4
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 1.5e-106 390.6 408 61.0
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.9e-106 390.2 422 61.6
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 7.4e-106 388.3 281 72.2
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.7e-106 387.9 404 63.9
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.7e-106 387.9 404 63.9
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 9.7e-106 387.9 368 60.3
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 1.3e-105 387.5 267 75.3
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.6e-105 387.1 405 58.5
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 4.8e-105 385.6 364 62.4
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 5.3e-104 382.1 279 71.7
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 9.0e-104 381.3 419 59.9
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.6e-103 379.8 371 58.2
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.7e-102 377.1 369 60.4
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 8.5e-102 374.8 262 76.0
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 1.2e-100 370.9 400 58.2
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 2.3e-99 366.7 370 57.8
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.0e-99 366.3 414 61.4
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 6.7e-99 365.2 289 69.2
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 1.9e-98 363.6 288 69.1
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 6.3e-97 358.6 244 77.0
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 1.4e-96 357.5 424 59.7
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 1.4e-96 357.5 239 76.2
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.6e-95 353.2 405 66.4
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 4.5e-95 352.4 346 61.0
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-94 350.5 285 69.5
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-93 347.4 285 69.8
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 5.1e-91 339.0 263 65.8
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 5.3e-88 328.9 263 63.9
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 3.4e-87 326.2 360 52.2
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.6e-84 316.2 268 61.6
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 1.0e-83 314.7 266 64.3
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 2.0e-82 310.5 271 59.4
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.6e-82 310.1 225 74.7
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.1e-80 304.7 268 59.3
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.1e-80 304.7 268 59.3
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.2e-76 291.2 198 74.2
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 3.6e-76 289.7 258 57.0
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 4.7e-76 289.3 401 48.6
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 6.7e-75 285.4 257 56.4
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.2e-74 284.6 265 55.5
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.3e-67 260.4 344 50.6
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.4e-64 251.1 298 53.0
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 2.0e-63 247.3 167 79.0
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 6.6e-62 242.3 164 74.4
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.1e-60 237.3 288 59.7
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.4e-48 198.0 184 54.9
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 5.2e-43 179.5 241 69.3
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.1e-38 162.9 237 55.3
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.0e-26 124.4 110 66.4
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.8e-25 120.2 96 58.3
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 8.4e-25 119.0 93 66.7
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.6e-18 97.4 97 62.9
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.1e-15 87.8 64 65.6
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 6.0e-15 86.3 252 29.0
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.0e-14 85.5 242 28.5
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.1e-13 82.0 111 41.4
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 1.0e-06 58.9 89 40.4


User provided reference genes

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