Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold97G29135 Striga asiatica HOM05D003198 ORTHO05D003716 1.8e-96 355.9 181 100.0
MSTRG.13001 Avicennia marina HOM05D003198 ORTHO05D003716 5.4e-48 194.9 138 76.1
Migut.H01790 Erythranthe guttata HOM05D003198 ORTHO05D003716 1.3e-46 190.3 139 74.8
Oeu007993.1 Olea europaea HOM05D003198 ORTHO05D003716 1.2e-39 167.2 132 68.2
unitig_61.g26144 Utricularia gibba HOM05D003198 ORTHO05D003716 7.3e-37 157.9 138 63.0
Cc05_g14360 Coffea canephora HOM05D003198 ORTHO05D003716 9.5e-37 157.5 127 63.0
Peaxi162Scf00235g00837 Petunia axillaris HOM05D003198 ORTHO05D003716 9.5e-37 157.5 137 59.9
Nitab4.5_0011589g0020 Nicotiana tabacum HOM05D003198 ORTHO05D003716 6.1e-36 154.8 138 58.0
Nitab4.5_0001160g0070 Nicotiana tabacum HOM05D003198 ORTHO05D003716 4.0e-35 152.1 139 57.6
unitig_21.g20275 Utricularia gibba HOM05D003198 ORTHO05D003867 5.2e-35 151.8 138 59.4
Oeu013111.1 Olea europaea HOM05D003198 ORTHO05D003716 3.4e-34 149.1 134 60.4
Nn1g03326 Nelumbo nucifera HOM05D003198 ORTHO05D003716 4.4e-34 148.7 138 56.5
Dinv40799 Davidia involucrata HOM05D003198 ORTHO05D003716 2.2e-33 146.4 128 60.2
CiPaw.11G195200 Carya illinoinensis HOM05D003198 ORTHO05D003716 6.4e-33 144.8 128 58.6
Lj6g0024812 Lotus japonicus HOM05D003198 ORTHO05D003716 6.4e-33 144.8 138 58.7
arahy.Tifrunner.gnm1.ann1.37WV86 Arachis hypogaea HOM05D003198 ORTHO05D003716 8.3e-33 144.4 139 57.6
Lj1A881T82 Lonicera japonica HOM05D003198 ORTHO05D003716 1.1e-32 144.1 132 61.4
Solyc07g065010.4 Solanum lycopersicum HOM05D003198 ORTHO05D003716 1.4e-32 143.7 135 54.8
arahy.Tifrunner.gnm1.ann1.39HZ5K Arachis hypogaea HOM05D003198 ORTHO05D003716 3.2e-32 142.5 139 56.8
TAR626G0152 Trochodendron aralioides HOM05D003198 ORTHO05D003716 5.4e-32 141.7 117 63.2
Cfa020272 Carpinus fangiana HOM05D003198 ORTHO05D003716 7.0e-32 141.4 138 53.6
Haze_09751 Corylus avellana HOM05D003198 ORTHO05D000645 1.6e-31 140.2 117 59.0
Nn1g07356 Nelumbo nucifera HOM05D003198 ORTHO05D003716 1.6e-31 140.2 137 55.5
Duzib268G1559 Durio zibethinus HOM05D003198 ORTHO05D003716 3.5e-31 139.0 117 60.7
QL08p007660 Quercus lobata HOM05D003198 ORTHO05D003716 4.6e-31 138.7 117 60.7
Glyma.18G089700 Glycine max HOM05D003198 ORTHO05D003716 7.8e-31 137.9 137 52.6
LjContig00272g0024308 Lotus japonicus HOM05D003198 ORTHO05D003716 7.8e-31 137.9 138 50.7
QL08p029708 Quercus lobata HOM05D003198 ORTHO05D003716 1.0e-30 137.5 135 56.3
Phvul.006G048700 Phaseolus vulgaris HOM05D003198 ORTHO05D003716 1.3e-30 137.1 139 53.2
VMungo0647G1222 Vigna mungo HOM05D003198 ORTHO05D003716 1.7e-30 136.7 135 58.5
Hma1.2p1_0036F.1_g023060 Hydrangea macrophylla HOM05D003198 ORTHO05D003716 2.3e-30 136.3 134 53.7
LjContig00272g0019387 Lotus japonicus HOM05D003198 ORTHO05D003716 2.3e-30 136.3 138 50.0
Thecc.07G027500 Theobroma cacao HOM05D003198 ORTHO05D003716 5.0e-30 135.2 117 63.2
Aqoxy1G02847 Aquilegia oxysepala HOM05D003198 ORTHO05D003716 6.6e-30 134.8 117 57.3
COL.COLO4_09742 Corchorus olitorius HOM05D003198 ORTHO05D003716 6.6e-30 134.8 133 57.1
Oeu019640.1 Olea europaea HOM05D003198 ORTHO05D003716 1.1e-29 134.0 95 70.5
Phvul.008G273000 Phaseolus vulgaris HOM05D003198 ORTHO05D003716 1.1e-29 134.0 142 52.1
QL08p007665 Quercus lobata HOM05D003198 ORTHO05D003716 1.5e-29 133.7 117 59.0
Psat5g173000 Pisum sativum HOM05D003198 ORTHO05D003716 1.9e-29 133.3 131 54.2
Glyma.02G295500 Glycine max HOM05D003198 ORTHO05D003716 2.5e-29 132.9 141 53.2
Lalb_Chr20g0116111 Lupinus albus HOM05D003198 ORTHO05D003716 2.5e-29 132.9 120 55.8
VMungo0647G1270 Vigna mungo HOM05D003198 ORTHO05D003716 2.5e-29 132.9 139 51.1
CiPaw.03G274400 Carya illinoinensis HOM05D003198 ORTHO05D003716 3.3e-29 132.5 136 52.9
TWI38G1197 Tripterygium wilfordii HOM05D003198 ORTHO05D003716 3.3e-29 132.5 135 54.8
PGR083G1857 Punica granatum HOM05D003198 ORTHO05D003716 4.3e-29 132.1 117 53.0
Potri.001G358800 Populus trichocarpa HOM05D003198 ORTHO05D003716 5.6e-29 131.7 117 59.0
ClCG02G009680 Citrullus lanatus HOM05D003198 ORTHO05D003716 7.3e-29 131.3 139 51.8
FvH4_3g23590 Fragaria vesca HOM05D003198 ORTHO05D003716 7.3e-29 131.3 117 59.8
FAN21G2261 Fragaria x ananassa HOM05D003198 ORTHO05D003716 7.3e-29 131.3 117 59.8
TWI36G1248 Tripterygium wilfordii HOM05D003198 ORTHO05D003716 7.3e-29 131.3 143 49.7
Manes.15G065900 Manihot esculenta HOM05D003198 ORTHO05D003716 9.5e-29 131.0 138 53.6
Hma1.2p1_0133F.1_g060850 Hydrangea macrophylla HOM05D003198 ORTHO05D003716 1.2e-28 130.6 138 53.6
Sabra16G0236600 Salix brachista HOM05D003198 ORTHO05D003716 1.2e-28 130.6 134 53.7
Eucgr.K00725 Eucalyptus grandis HOM05D003198 ORTHO05D003716 1.6e-28 130.2 131 54.2
Actinidia09760 Actinidia chinensis HOM05D003198 ORTHO05D003716 2.1e-28 129.8 139 52.5
Glyma.14G051400 Glycine max HOM05D003198 ORTHO05D003716 2.1e-28 129.8 136 57.4
Prupe.4G224100 Prunus persica HOM05D003198 ORTHO05D003716 2.1e-28 129.8 138 53.6
arahy.Tifrunner.gnm1.ann1.M5AJQH Arachis hypogaea HOM05D003198 ORTHO05D003716 2.8e-28 129.4 138 51.4
Gorai.013G157300 Gossypium raimondii HOM05D003198 ORTHO05D003716 2.8e-28 129.4 117 59.8
vmacro12142 Vaccinium macrocarpon HOM05D003198 ORTHO05D003716 2.8e-28 129.4 110 61.8
arahy.Tifrunner.gnm1.ann1.EAF0L1 Arachis hypogaea HOM05D003198 ORTHO05D003716 4.7e-28 128.6 138 50.7
Haze_12742 Corylus avellana HOM05D003198 ORTHO05D003716 4.7e-28 128.6 114 59.6
Medtr5g093980 Medicago truncatula HOM05D003198 ORTHO05D003716 4.7e-28 128.6 115 55.7
MD03G1192700 Malus domestica HOM05D003198 ORTHO05D003716 8.0e-28 127.9 138 52.2
RcHm_v2.0_Chr5g0041601 Rosa chinensis HOM05D003198 ORTHO05D003716 8.0e-28 127.9 136 52.9
CSS0018093 Camellia sinensis var. sinensis HOM05D003198 ORTHO05D003716 1.1e-27 127.5 136 51.5
Cfa014294 Carpinus fangiana HOM05D003198 ORTHO05D003716 1.1e-27 127.5 106 63.2
Ciclev10008119m.g Citrus clementina HOM05D003198 ORTHO05D003716 1.1e-27 127.5 134 53.7
Ciclev10014979m.g Citrus clementina HOM05D003198 ORTHO05D003716 1.8e-27 126.7 137 53.3
Gohir.D13G140700 Gossypium hirsutum HOM05D003198 ORTHO05D003716 1.8e-27 126.7 117 59.0
PGR142G2700 Punica granatum HOM05D003198 ORTHO05D003716 2.3e-27 126.3 118 55.1
Prupe.3G206400 Prunus persica HOM05D003198 ORTHO05D003716 3.1e-27 125.9 150 50.7
CANSAT64G0645 Cannabis sativa HOM05D003198 ORTHO05D003716 4.0e-27 125.6 137 54.7
Lalb_Chr04g0248121 Lupinus albus HOM05D003198 ORTHO05D003716 5.2e-27 125.2 138 51.4
Actinidia05057 Actinidia chinensis HOM05D003198 ORTHO05D003716 6.8e-27 124.8 137 50.4
CSS0000021 Camellia sinensis var. sinensis HOM05D003198 ORTHO05D003716 6.8e-27 124.8 136 50.7
GSVIVG01030539001 Vitis vinifera HOM05D003198 ORTHO05D003716 6.8e-27 124.8 131 51.1
Lalb_Chr00c48g0412921 Lupinus albus HOM05D003198 ORTHO05D003716 8.9e-27 124.4 138 51.4
Sabra14G0122400 Salix brachista HOM05D003198 ORTHO05D003716 8.9e-27 124.4 139 49.6
Potri.014G160700 Populus trichocarpa HOM05D003198 ORTHO05D003716 1.2e-26 124.0 139 50.4
TPR.G17694 Trifolium pratense HOM05D003198 ORTHO05D003716 1.2e-26 124.0 134 56.0
DCAR_016646 Daucus carota HOM05D003198 ORTHO05D003716 1.5e-26 123.6 114 53.5
COL.COLO4_05388 Corchorus olitorius HOM05D003198 ORTHO05D003716 2.0e-26 123.2 119 52.9
Aa31LG1G20050 Aethionema arabicum HOM05D003198 ORTHO05D003716 3.4e-26 122.5 131 48.1
Lsat_1_v5_gn_5_2701 Lactuca sativa HOM05D003198 ORTHO05D003716 3.4e-26 122.5 130 53.8
vmacro22305 Vaccinium macrocarpon HOM05D003198 ORTHO05D003716 3.4e-26 122.5 137 51.8
Thhalv10007436m.g Eutrema salsugineum HOM05D003198 ORTHO05D003716 4.4e-26 122.1 131 48.1
FvH4_6g41770 Fragaria vesca HOM05D003198 ORTHO05D003716 4.4e-26 122.1 138 51.4
FAN14G3592 Fragaria x ananassa HOM05D003198 ORTHO05D003716 4.4e-26 122.1 138 51.4
THA.LOC104816032 Tarenaya hassleriana HOM05D003198 ORTHO05D003716 4.4e-26 122.1 131 46.6
Psat2g027120 Pisum sativum HOM05D003198 ORTHO05D003716 5.8e-26 121.7 136 54.4
Sp1g03840 Schrenkiella parvula HOM05D003198 ORTHO05D003716 5.8e-26 121.7 131 48.9
BolC5t29095H Brassica oleracea HOM05D003198 ORTHO05D003716 7.5e-26 121.3 131 48.1
CARHR004380 Cardamine hirsuta HOM05D003198 ORTHO05D003716 7.5e-26 121.3 131 48.1
Cpa.g.sc132.52 Carica papaya HOM05D003198 ORTHO05D003716 7.5e-26 121.3 106 59.4
Manes.03G136000 Manihot esculenta HOM05D003198 ORTHO05D003716 7.5e-26 121.3 137 51.8
vmacro22998 Vaccinium macrocarpon HOM05D003198 ORTHO05D003716 7.5e-26 121.3 137 51.1
arahy.Tifrunner.gnm1.ann1.9JEK37 Arachis hypogaea HOM05D003198 ORTHO05D003716 9.8e-26 120.9 136 50.7
CsaV3_2G034360 Cucumis sativus L. HOM05D003198 ORTHO05D003716 9.8e-26 120.9 106 59.4
FAN02G1329 Fragaria x ananassa HOM05D003198 ORTHO05D003716 9.8e-26 120.9 117 53.8
FAN11G3493 Fragaria x ananassa HOM05D003198 ORTHO05D003716 9.8e-26 120.9 110 60.0
Lalb_Chr00c48g0413011 Lupinus albus HOM05D003198 ORTHO05D003716 9.8e-26 120.9 138 50.0
VMungo0540G1357 Vigna mungo HOM05D003198 ORTHO05D003716 9.8e-26 120.9 114 54.4
C05p03130 Brassica napus HOM05D003198 ORTHO05D003716 1.3e-25 120.6 131 48.1
Sed0019099 Sechium edule HOM05D003198 ORTHO05D003716 1.3e-25 120.6 109 57.8
TPR.G30638 Trifolium pratense HOM05D003198 ORTHO05D003716 1.3e-25 120.6 138 47.1
AL1G14700 Arabidopsis lyrata HOM05D003198 ORTHO05D003716 1.7e-25 120.2 106 56.6
Glyma.14G017900 Glycine max HOM05D003198 ORTHO05D003716 1.7e-25 120.2 142 49.3
Hund23195 Selenicereus undatus HOM05D003198 ORTHO05D003716 1.7e-25 120.2 134 55.2
Cpa.g.sc12.239 Carica papaya HOM05D003198 ORTHO05D003716 2.2e-25 119.8 147 48.3
FAN05G5757 Fragaria x ananassa HOM05D003198 ORTHO05D003716 2.2e-25 119.8 117 53.8
Manes.12G056200 Manihot esculenta HOM05D003198 ORTHO05D003716 2.2e-25 119.8 114 53.5
MELO3C019348.2 Cucumis melo HOM05D003198 ORTHO05D003716 2.9e-25 119.4 132 52.3
Carub.0001s0421 Capsella rubella HOM05D003198 ORTHO05D003716 3.7e-25 119.0 113 52.2
BraA10t42617Z Brassica rapa HOM05D003198 ORTHO05D003716 4.9e-25 118.6 129 48.8
CANSAT11G0980 Cannabis sativa HOM05D003198 ORTHO05D003716 4.9e-25 118.6 138 50.0
A10p03410 Brassica napus HOM05D003198 ORTHO05D003716 6.4e-25 118.2 129 48.8
Ca_06351_v3 Cicer arietinum L. HOM05D003198 ORTHO05D000645 8.3e-25 117.9 103 56.3
Duzib138G0118 Durio zibethinus HOM05D003198 ORTHO05D003716 8.3e-25 117.9 119 51.3
Gohir.D11G158700 Gossypium hirsutum HOM05D003198 ORTHO05D003716 8.3e-25 117.9 118 50.8
Gorai.007G169100 Gossypium raimondii HOM05D003198 ORTHO05D003716 8.3e-25 117.9 118 50.8
LjContig00029g0002987 Lotus japonicus HOM05D003198 ORTHO05D003716 8.3e-25 117.9 135 53.3
Sed0016938 Sechium edule HOM05D003198 ORTHO05D003716 8.3e-25 117.9 136 48.5
RcHm_v2.0_Chr2g0157551 Rosa chinensis HOM05D003198 ORTHO05D003716 1.1e-24 117.5 138 48.6
CsaV3_7G021000 Cucumis sativus L. HOM05D003198 ORTHO05D003716 1.4e-24 117.1 127 50.4
Rhsim06G0223900 Rhododendron simsii HOM05D003198 ORTHO05D003716 1.4e-24 117.1 138 49.3
Sc06g0009740 Simmondsia chinensis HOM05D003198 ORTHO05D003716 1.4e-24 117.1 106 57.5
arahy.Tifrunner.gnm1.ann1.8LWJ5G Arachis hypogaea HOM05D003198 ORTHO05D003716 1.9e-24 116.7 136 49.3
MD09G1117400 Malus domestica HOM05D003198 ORTHO05D003716 1.9e-24 116.7 117 53.8
DCAR_021127 Daucus carota HOM05D003198 ORTHO05D003716 4.1e-24 115.5 118 52.5
Medtr3g054360 Medicago truncatula HOM05D003198 ORTHO05D003716 4.1e-24 115.5 132 47.0
Aa31LG8G7080 Aethionema arabicum HOM05D003198 ORTHO05D003716 5.4e-24 115.2 134 48.5
ATR1101G097 Amborella trichopoda HOM05D003198 ORTHO05D003716 5.4e-24 115.2 138 45.7
MBI16_g42269_MAGBIO Magnolia biondii HOM05D003198 ORTHO05D003716 5.4e-24 115.2 116 50.0
Ah.04g166180 Amaranthus hybridus HOM05D003198 ORTHO05D003716 9.2e-24 114.4 119 54.6
MELO3C013125.2 Cucumis melo HOM05D003198 ORTHO05D003716 1.6e-23 113.6 128 49.2
PGSC0003DMG401022202 Solanum tuberosum HOM05D003198 ORTHO05D003716 1.6e-23 113.6 90 63.3
EL10Ac4g07684 Beta vulgaris HOM05D003198 ORTHO05D003716 2.1e-23 113.2 136 51.5
CSS0044172 Camellia sinensis var. sinensis HOM05D003198 ORTHO05D003716 2.1e-23 113.2 138 47.8
CSS0008016 Camellia sinensis var. sinensis HOM05D003198 ORTHO05D003716 2.7e-23 112.8 138 47.8
ClCG09G011090 Citrullus lanatus HOM05D003198 ORTHO05D003716 2.7e-23 112.8 135 46.7
Sp3g18300 Schrenkiella parvula HOM05D003198 ORTHO05D003716 2.7e-23 112.8 128 46.9
Medtr3g054370 Medicago truncatula HOM05D003198 ORTHO05D003716 3.5e-23 112.5 131 47.3
BraA05t21741Z Brassica rapa HOM05D003198 ORTHO05D003716 7.8e-23 111.3 156 41.7
AL880U10020 Arabidopsis lyrata HOM05D003198 ORTHO05D003716 1.3e-22 110.5 128 46.1
AL3G33980 Arabidopsis lyrata HOM05D003198 ORTHO05D003716 1.7e-22 110.2 154 40.3
CARHR095880 Cardamine hirsuta HOM05D003198 ORTHO05D003716 1.7e-22 110.2 119 46.2
Sopen07g033220 Solanum pennellii HOM05D003198 ORTHO05D003716 2.3e-22 109.8 90 60.0
Ah.01g001800 Amaranthus hybridus HOM05D003198 ORTHO05D007707 3.0e-22 109.4 116 46.6
EL10Ac9g22786 Beta vulgaris HOM05D003198 ORTHO05D003716 3.0e-22 109.4 114 49.1
A05p28650 Brassica napus HOM05D003198 ORTHO05D003716 3.0e-22 109.4 161 40.4
HanXRQChr08g0233641 Helianthus annuus HOM05D003198 ORTHO05D003716 3.0e-22 109.4 139 47.5
AT3G20270 Arabidopsis thaliana HOM05D003198 ORTHO05D003716 3.9e-22 109.0 128 44.5
Os06g0309200 Oryza sativa ssp. japonica HOM05D003198 ORTHO05D003716 3.9e-22 109.0 139 41.7
Lalb_Chr10g0105481 Lupinus albus HOM05D003198 ORTHO05D003716 6.6e-22 108.2 130 48.5
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.1e-21 107.5 128 45.3
Medtr5g084690 Medicago truncatula HOM05D003198 ORTHO05D003716 1.9e-21 106.7 110 50.9
C05p44050 Brassica napus HOM05D003198 ORTHO05D003716 2.5e-21 106.3 161 39.1
HPP92_015463 Vanilla planifolia HOM05D003198 ORTHO05D003716 2.5e-21 106.3 135 44.4
Prupe.1G199100 Prunus persica HOM05D003198 ORTHO05D003716 4.3e-21 105.5 138 46.4
Os09g0482720 Oryza sativa ssp. japonica HOM05D003198 ORTHO05D003716 7.3e-21 104.8 111 48.6
Zm00001eb381520 Zea mays HOM05D003198 ORTHO05D003716 1.2e-20 104.0 131 41.2
PSO541G3688 Papaver somniferum HOM05D003198 ORTHO05D003716 2.1e-20 103.2 143 42.7
Zm00001eb316440 Zea mays HOM05D003198 ORTHO05D003716 2.8e-20 102.8 131 42.7
PSO675G2203 Papaver somniferum HOM05D003198 ORTHO05D003716 3.6e-20 102.4 143 42.7
Lsat_1_v5_gn_7_94640 Lactuca sativa HOM05D003198 ORTHO05D003716 1.8e-19 100.1 114 47.4
CAN.G337.51 Capsicum annuum HOM05D003198 ORTHO05D003716 5.2e-19 98.6 90 55.6
CDE07G0032 Ceratophyllum demersum HOM05D003198 ORTHO05D003716 5.2e-19 98.6 117 47.9
TPR.G32229 Trifolium pratense HOM05D003198 ORTHO05D003716 5.2e-19 98.6 158 43.0
SEGI_01628 Sequoiadendron giganteum HOM05D003198 ORTHO05D003716 7.5e-18 94.7 116 47.4
GSVIVG01037733001 Vitis vinifera HOM05D003198 ORTHO05D003716 2.2e-17 93.2 93 55.9
Oeu054312.2 Olea europaea HOM05D003198 ORTHO05D003716 4.9e-17 92.0 64 73.4
SEGI_04729 Sequoiadendron giganteum HOM05D003198 ORTHO05D003716 1.2e-15 87.4 120 40.8
ECA236G1803 Erigeron canadensis HOM05D003198 ORTHO05D000023 1.0e-14 84.3 109 45.0
HanXRQChr16g0508301 Helianthus annuus HOM05D003198 ORTHO05D003716 1.5e-13 80.5 136 35.3
SMO332G0012 Selaginella moellendorffii HOM05D003198 ORTHO05D003716 9.9e-10 67.8 102 36.3
Ca_06043_v3 Cicer arietinum L. HOM05D003198 ORTHO05D003716 1.3e-09 67.4 69 52.2
Mapoly0003s0230 Marchantia polymorpha HOM05D003198 ORTHO05D003716 3.8e-09 65.9 111 33.3
ECA246G1111 Erigeron canadensis HOM05D003198 ORTHO05D003716 2.7e-07 59.7 74 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3311 Anthoceros agrestis HOM05D003198 ORTHO05D003716 7.8e-07 58.2 118 30.5
Duzib213G0191 Durio zibethinus HOM05D003198 ORTHO05D000645 1.7e-06 57.0 35 71.4
Glyma.08G322501 Glycine max HOM05D003198 ORTHO05D003716 1.7e-06 57.0 67 46.3
Carub.0003s2021 Capsella rubella HOM05D003198 ORTHO05D003716 5.1e-06 55.5 64 46.9
CBR_g6308 Chara braunii HOM05D003198 ORTHO05D003716 5.1e-06 55.5 108 28.7


User provided reference genes

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