Gene: AT3G20270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G20270
  • Transcript Identifier AT3G20270.2
  • Gene Type Coding gene
  • Location Chr3 : 7068879-7070866 : positive

Gene Family Information

  • ID HOM05D003198
  • #Genes/#Species 214/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G20270.2
  • uniprot Q8VYC2

Descriptions

  • Description lipid-binding serum glycoprotein family protein
  • Computational description lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), F-box domain, Skp2-like (InterPro:IPR022364), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT1G04970.1); Has 490 Blast hits to 486 proteins in 66 species: Archae - 2; Bacteria - 0; Metazoa - 380; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
  • Computational description lipid-binding serum glycoprotein family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bactericidal permeability-increasing protein, alpha/beta domain (InterPro:IPR017943), Lipid-binding serum glycoprotein, C-terminal (InterPro:IPR001124), Lipid-binding serum glycoprotein, N-terminal (InterPro:IPR017942); BEST Arabidopsis thaliana protein match is: lipid-binding serum glycoprotein family protein (TAIR:AT1G04970.1); Has 465 Blast hits to 462 proteins in 65 species: Archae - 2; Bacteria - 0; Metazoa - 380; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IMP
Gene Ontologyregulation of gene expression1
GO:1903409
IMP
Gene Ontologyreactive oxygen species biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
Gene Ontologylipid binding
GO:0008289
IEA
InterProlipid binding
GO:0001530
IDA
Gene Ontologylipopolysaccharide binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005615
IEA
Gene Ontologyextracellular space
GO:0005615
IEA
InterProextracellular space
GO:0005634
ISM
Gene Ontologynucleus
GO:0048046
IDA
Gene Ontologyapoplast1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain superfamily
IPR001124 Lipid-binding serum glycoprotein, C-terminal
IPR030675 Lipid binding protein BPI/LBP
IPR017942 Lipid-binding serum glycoprotein, N-terminal
Mapman id Description
35.1 not assigned.annotated