Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28788 Striga asiatica HOM05D004785 ORTHO05D005704 8.7e-241 836.6 450 100.0
Migut.N01482 Erythranthe guttata HOM05D004785 ORTHO05D005704 1.6e-154 550.1 458 66.6
SalBow4G2313 Salvia bowleyana HOM05D004785 ORTHO05D005704 1.8e-153 546.6 455 65.3
SalBow5G0866 Salvia bowleyana HOM05D004785 ORTHO05D005704 1.7e-148 530.0 458 68.3
SalBow5G5194 Salvia bowleyana HOM05D004785 ORTHO05D005704 1.7e-148 530.0 458 68.3
MSTRG.20603 Avicennia marina HOM05D004785 ORTHO05D005704 1.8e-145 520.0 460 63.9
Cc02_g27530 Coffea canephora HOM05D004785 ORTHO05D005704 4.8e-138 495.4 467 59.5
Potri.001G269900 Populus trichocarpa HOM05D004785 ORTHO05D005704 3.2e-134 482.6 467 59.1
GSVIVG01032056001 Vitis vinifera HOM05D004785 ORTHO05D005704 1.8e-132 476.9 468 61.1
Sabra16G0165300 Salix brachista HOM05D004785 ORTHO05D005704 1.5e-131 473.8 470 62.6
RcHm_v2.0_Chr1g0314901 Rosa chinensis HOM05D004785 ORTHO05D005704 7.4e-131 471.5 459 57.3
Dinv09378 Davidia involucrata HOM05D004785 ORTHO05D005704 2.1e-130 469.9 510 54.5
Prupe.2G009600 Prunus persica HOM05D004785 ORTHO05D005704 2.8e-130 469.5 464 58.2
Atru.chr11.2638 Acer truncatum HOM05D004785 ORTHO05D005704 3.7e-130 469.2 467 62.5
CiPaw.13G002800 Carya illinoinensis HOM05D004785 ORTHO05D005704 6.2e-130 468.4 466 58.2
CSS0030425 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 1.4e-129 467.2 463 62.2
CSS0016942 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 4.0e-129 465.7 463 62.0
CAN.G170.130 Capsicum annuum HOM05D004785 ORTHO05D005704 5.3e-129 465.3 462 57.1
Sopen01g033900 Solanum pennellii HOM05D004785 ORTHO05D005704 5.3e-129 465.3 464 57.3
Dinv43463 Davidia involucrata HOM05D004785 ORTHO05D005704 1.5e-128 463.8 477 56.2
PGSC0003DMG400025264 Solanum tuberosum HOM05D004785 ORTHO05D005704 2.0e-128 463.4 464 57.1
FvH4_7g00680 Fragaria vesca HOM05D004785 ORTHO05D005704 2.6e-128 463.0 462 57.1
FAN06G5068 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.6e-128 463.0 462 57.1
FAN01G2446 Fragaria x ananassa HOM05D004785 ORTHO05D005704 3.4e-128 462.6 462 56.9
Manes.10G146300 Manihot esculenta HOM05D004785 ORTHO05D005704 3.4e-128 462.6 470 61.7
FAN10G3515 Fragaria x ananassa HOM05D004785 ORTHO05D005704 4.5e-128 462.2 462 57.1
Hma1.2p1_0845F.1_g227490 Hydrangea macrophylla HOM05D004785 ORTHO05D005704 4.5e-128 462.2 471 62.4
FAN03G2451 Fragaria x ananassa HOM05D004785 ORTHO05D005704 7.6e-128 461.5 462 57.4
FAN01G2822 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.0e-127 461.1 462 56.9
Solyc01g086890.3 Solanum lycopersicum HOM05D004785 ORTHO05D005704 3.8e-127 459.1 464 56.5
Sabra09G0047800 Salix brachista HOM05D004785 ORTHO05D005704 8.4e-127 458.0 467 60.8
Potri.009G064600 Populus trichocarpa HOM05D004785 ORTHO05D005704 2.5e-126 456.4 467 57.6
Rhsim01G0130900 Rhododendron simsii HOM05D004785 ORTHO05D005704 3.2e-126 456.1 458 56.8
Cpa.g.sc234.14 Carica papaya HOM05D004785 ORTHO05D005704 5.5e-126 455.3 496 53.2
Manes.07G003900 Manihot esculenta HOM05D004785 ORTHO05D005704 7.1e-126 454.9 471 61.6
TAR633G2005 Trochodendron aralioides HOM05D004785 ORTHO05D005704 9.3e-126 454.5 464 61.0
Sc15g0001680 Simmondsia chinensis HOM05D004785 ORTHO05D005704 3.5e-125 452.6 457 61.7
Thecc.01G414000 Theobroma cacao HOM05D004785 ORTHO05D005704 3.5e-125 452.6 467 56.1
CANSAT11G0943 Cannabis sativa HOM05D004785 ORTHO05D005704 7.9e-125 451.4 459 62.3
vmacro21177 Vaccinium macrocarpon HOM05D004785 ORTHO05D005704 1.0e-124 451.1 458 58.5
Nn7g36099 Nelumbo nucifera HOM05D004785 ORTHO05D005704 1.3e-124 450.7 464 57.5
Duzib138G0206 Durio zibethinus HOM05D004785 ORTHO05D005704 1.8e-124 450.3 467 56.3
VMungo1080G1418 Vigna mungo HOM05D004785 ORTHO05D005704 2.3e-124 449.9 465 56.3
Nitab4.5_0006850g0010 Nicotiana tabacum HOM05D004785 ORTHO05D005704 6.7e-124 448.4 446 57.0
Phvul.005G036800 Phaseolus vulgaris HOM05D004785 ORTHO05D005704 8.7e-124 448.0 465 56.3
Gohir.D08G037900 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.1e-123 447.6 456 55.7
Gorai.004G035900 Gossypium raimondii HOM05D004785 ORTHO05D005704 7.4e-123 444.9 461 54.9
Aqoxy1G00294 Aquilegia oxysepala HOM05D004785 ORTHO05D005704 9.7e-123 444.5 457 56.0
Ciclev10031609m.g Citrus clementina HOM05D004785 ORTHO05D005704 1.3e-122 444.1 465 59.8
TWI09G1360 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 1.3e-122 444.1 477 59.7
Lalb_Chr19g0132061 Lupinus albus HOM05D004785 ORTHO05D005704 1.6e-122 443.7 457 56.9
Actinidia20681 Actinidia chinensis HOM05D004785 ORTHO05D005704 2.2e-122 443.4 464 59.3
Glyma.08G152600 Glycine max HOM05D004785 ORTHO05D005704 3.7e-122 442.6 463 56.8
unitig_61.g26449 Utricularia gibba HOM05D004785 ORTHO05D005704 3.7e-122 442.6 453 62.0
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.1e-121 441.0 453 57.2
TWI73G0859 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 2.4e-121 439.9 478 59.2
ECA246G0971 Erigeron canadensis HOM05D004785 ORTHO05D005704 3.1e-121 439.5 450 55.6
arahy.Tifrunner.gnm1.ann1.59DMFX Arachis hypogaea HOM05D004785 ORTHO05D005704 4.1e-121 439.1 462 55.8
Glyma.15G272000 Glycine max HOM05D004785 ORTHO05D005704 5.3e-121 438.7 454 57.3
Sed0027076 Sechium edule HOM05D004785 ORTHO05D005704 5.3e-121 438.7 466 54.7
Lsat_1_v5_gn_4_68280 Lactuca sativa HOM05D004785 ORTHO05D005704 1.5e-120 437.2 448 62.1
CsaV3_7G031250 Cucumis sativus L. HOM05D004785 ORTHO05D005704 2.6e-120 436.4 473 56.0
Lj3g0006296 Lotus japonicus HOM05D004785 ORTHO05D005704 1.3e-119 434.1 461 55.1
Peaxi162Scf00428g00096 Petunia axillaris HOM05D004785 ORTHO05D005704 1.3e-119 434.1 467 58.5
AUR62022266 Chenopodium quinoa HOM05D004785 ORTHO05D005704 1.7e-119 433.7 462 61.3
Lj3g0000927 Lotus japonicus HOM05D004785 ORTHO05D005704 1.7e-119 433.7 468 53.6
QL04p005208 Quercus lobata HOM05D004785 ORTHO05D005704 1.7e-119 433.7 467 55.5
arahy.Tifrunner.gnm1.ann1.M8XEBR Arachis hypogaea HOM05D004785 ORTHO05D005704 2.2e-119 433.3 462 56.1
MELO3C023531.2 Cucumis melo HOM05D004785 ORTHO05D005704 2.2e-119 433.3 472 56.8
Hund07648 Selenicereus undatus HOM05D004785 ORTHO05D005704 5.0e-119 432.2 457 59.1
Hund03669 Selenicereus undatus HOM05D004785 ORTHO05D005704 6.5e-119 431.8 461 55.7
HanXRQChr15g0479141 Helianthus annuus HOM05D004785 ORTHO05D005704 2.5e-118 429.9 454 55.7
Lalb_Chr01g0008111 Lupinus albus HOM05D004785 ORTHO05D005704 3.2e-118 429.5 462 55.6
MD07G1006500 Malus domestica HOM05D004785 ORTHO05D005704 5.5e-118 428.7 511 50.9
COL.COLO4_23900 Corchorus olitorius HOM05D004785 ORTHO05D005704 6.1e-117 425.2 462 58.4
MBI04_g14260_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 7.9e-117 424.9 452 55.1
TPR.G21739 Trifolium pratense HOM05D004785 ORTHO05D005704 1.4e-116 424.1 465 54.0
AL5G32690 Arabidopsis lyrata HOM05D004785 ORTHO05D005704 3.0e-116 422.9 466 52.6
Gohir.A08G027150 Gossypium hirsutum HOM05D004785 ORTHO05D005704 3.0e-116 422.9 461 53.6
Duzib268G1355 Durio zibethinus HOM05D004785 ORTHO05D005704 8.8e-116 421.4 463 52.9
Eucgr.G03395 Eucalyptus grandis HOM05D004785 ORTHO05D005704 8.8e-116 421.4 460 56.1
Psat4g149360 Pisum sativum HOM05D004785 ORTHO05D005704 8.8e-116 421.4 466 54.1
AT3G52120 Arabidopsis thaliana HOM05D004785 ORTHO05D005704 1.5e-115 420.6 467 51.8
THA.LOC104801982 Tarenaya hassleriana HOM05D004785 ORTHO05D005704 3.3e-115 419.5 469 54.6
Nn2g15504 Nelumbo nucifera HOM05D004785 ORTHO05D005704 4.3e-115 419.1 461 54.9
A09p45180 Brassica napus HOM05D004785 ORTHO05D005704 1.3e-114 417.5 467 52.5
Thhalv10010376m.g Eutrema salsugineum HOM05D004785 ORTHO05D005704 3.7e-114 416.0 470 51.7
PGR044G1403 Punica granatum HOM05D004785 ORTHO05D005704 1.1e-113 414.5 461 57.9
CDE10G0170 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 1.4e-113 414.1 467 55.2
Sp5g10160 Schrenkiella parvula HOM05D004785 ORTHO05D005704 1.8e-113 413.7 474 51.5
BraA09t39981Z Brassica rapa HOM05D004785 ORTHO05D005704 4.1e-113 412.5 468 52.4
Ca_23868_v3 Cicer arietinum L. HOM05D004785 ORTHO05D005704 4.1e-113 412.5 462 60.4
Medtr8g036890 Medicago truncatula HOM05D004785 ORTHO05D005704 5.3e-113 412.1 465 53.8
Carub.0005s1846 Capsella rubella HOM05D004785 ORTHO05D005704 3.4e-112 409.5 472 51.7
BolC8t50356H Brassica oleracea HOM05D004785 ORTHO05D005704 7.7e-112 408.3 474 52.1
C08p27390 Brassica napus HOM05D004785 ORTHO05D005704 1.0e-111 407.9 474 52.1
Actinidia21563 Actinidia chinensis HOM05D004785 ORTHO05D005704 2.9e-111 406.4 458 57.6
MBI01_g36433_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 5.5e-110 402.1 468 53.2
BcaNung06094 Brassica carinata HOM05D004785 ORTHO05D005704 9.4e-110 401.4 473 51.8
PSO384G1867 Papaver somniferum HOM05D004785 ORTHO05D005704 1.6e-109 400.6 466 56.7
PSO339G6673 Papaver somniferum HOM05D004785 ORTHO05D005704 1.0e-108 397.9 465 56.6
EL10Ac9g21166 Beta vulgaris HOM05D004785 ORTHO05D005704 1.8e-105 387.1 449 57.5
AUR62031974 Chenopodium quinoa HOM05D004785 ORTHO05D005704 9.1e-105 384.8 454 57.0
unitig_0.g1380 Utricularia gibba HOM05D004785 ORTHO05D005704 8.5e-103 378.3 318 70.8
HPP92_022791 Vanilla planifolia HOM05D004785 ORTHO05D005704 1.4e-102 377.5 466 55.2
Aa31LG10G7210 Aethionema arabicum HOM05D004785 ORTHO05D005704 1.9e-102 377.1 516 46.1
Oeu014580.2 Olea europaea HOM05D004785 ORTHO05D005704 1.6e-101 374.0 398 61.1
Nitab4.5_0001542g0040 Nicotiana tabacum HOM05D004785 ORTHO05D005704 4.7e-101 372.5 298 65.4
ATR0733G146 Amborella trichopoda HOM05D004785 ORTHO05D005704 3.3e-99 366.3 460 55.0
Lj7C568G16 Lonicera japonica HOM05D004785 ORTHO05D005704 7.4e-99 365.2 460 52.6
CDE04G1996 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 8.2e-98 361.7 400 53.5
CDE10G1291 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 7.0e-97 358.6 454 47.8
SEGI_00751 Sequoiadendron giganteum HOM05D004785 ORTHO05D005704 7.0e-97 358.6 465 52.7
Zm00001eb325220 Zea mays HOM05D004785 ORTHO05D005704 7.2e-94 348.6 452 51.1
Mapoly0063s0041 Marchantia polymorpha HOM05D004785 ORTHO05D005704 2.8e-90 336.7 496 44.4
Sed0007108 Sechium edule HOM05D004785 ORTHO05D005704 2.5e-86 323.6 400 50.8
Eucgr.J01259 Eucalyptus grandis HOM05D004785 ORTHO05D005704 6.3e-82 308.9 395 53.7
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 9.1e-81 305.1 397 48.4
Pp3c7_22470 Physcomitrium patens HOM05D004785 ORTHO05D005704 1.3e-79 301.2 497 46.1
SMO358G0717 Selaginella moellendorffii HOM05D004785 ORTHO05D005704 7.8e-72 275.4 449 43.4
DCAR_029653 Daucus carota HOM05D004785 ORTHO05D005704 2.3e-68 263.8 444 41.7
MD02G1315400 Malus domestica HOM05D004785 ORTHO05D005704 4.9e-66 256.1 303 52.5
Haze_03237 Corylus avellana HOM05D004785 ORTHO05D005704 8.6e-55 218.8 237 54.0
CARHR161860 Cardamine hirsuta HOM05D004785 ORTHO05D005704 4.3e-54 216.5 142 75.4
Medtr8g036260 Medicago truncatula HOM05D004785 ORTHO05D005704 7.3e-54 215.7 301 47.8
Eucgr.B02099 Eucalyptus grandis HOM05D004785 ORTHO05D005704 3.4e-51 206.8 134 75.4
Gohir.D08G166700 Gossypium hirsutum HOM05D004785 ORTHO05D005704 4.1e-49 199.9 462 36.4
SHI47607 Sapria himalayana HOM05D004785 ORTHO05D005704 5.4e-49 199.5 259 45.2
SHI47732 Sapria himalayana HOM05D004785 ORTHO05D005704 5.4e-49 199.5 259 45.2
Gorai.004G174100 Gossypium raimondii HOM05D004785 ORTHO05D005704 4.6e-48 196.4 462 36.4
Gohir.A08G145800 Gossypium hirsutum HOM05D004785 ORTHO05D005704 5.8e-43 179.5 366 37.4
AagrBONN_evm.TU.Sc2ySwM_228.206 Anthoceros agrestis HOM05D004785 ORTHO05D005704 3.0e-39 167.2 355 34.6
Cre16.g686000 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D005704 3.2e-33 147.1 128 57.0
TAR623G0847 Trochodendron aralioides HOM05D004785 ORTHO05D005704 3.2e-33 147.1 190 47.9
Oeu006578.1 Olea europaea HOM05D004785 ORTHO05D005704 2.1e-29 134.4 194 45.9
Medtr8g036255 Medicago truncatula HOM05D004785 ORTHO05D005704 1.1e-28 132.1 74 83.8
Eucgr.A02263 Eucalyptus grandis HOM05D004785 ORTHO05D005704 1.8e-28 131.3 80 78.8
ClCG09G004330 Citrullus lanatus HOM05D004785 ORTHO05D005704 6.4e-26 122.9 69 84.1
Pp3c11_4770 Physcomitrium patens HOM05D004785 ORTHO05D005704 1.1e-25 122.1 304 33.6
Pp3c11_4670 Physcomitrium patens HOM05D004785 ORTHO05D005704 4.2e-25 120.2 260 35.4
A04p07240 Brassica napus HOM05D004785 ORTHO05D005704 7.9e-24 115.9 68 80.9
DCAR_029646 Daucus carota HOM05D004785 ORTHO05D005704 7.4e-22 109.4 68 76.5
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 7.4e-22 109.4 65 75.4
BolC4t25664H Brassica oleracea HOM05D004785 ORTHO05D005704 8.1e-21 105.9 125 46.4
BraA04t16419Z Brassica rapa HOM05D004785 ORTHO05D005704 1.1e-20 105.5 86 64.0
BcaC02g09278 Brassica carinata HOM05D004785 ORTHO05D005704 5.8e-19 99.8 74 66.2
C04p40800 Brassica napus HOM05D004785 ORTHO05D005704 5.8e-19 99.8 74 66.2
MCO15G372 Micromonas commoda HOM05D004785 ORTHO05D005704 3.3e-14 84.0 447 26.0
CARHR161850 Cardamine hirsuta HOM05D004785 ORTHO05D005704 8.2e-13 79.3 134 41.0
AagrBONN_evm.TU.Sc2ySwM_228.74 Anthoceros agrestis HOM05D004785 ORTHO05D005704 1.8e-12 78.2 56 67.9
unitig_0.g1381 Utricularia gibba HOM05D004785 ORTHO05D005704 1.5e-06 58.5 93 45.2
Migut.E00282 Erythranthe guttata HOM05D005384 ORTHO05D006477 9.7e-06 55.8 75 41.3


User provided reference genes

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