Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28593 Striga asiatica HOM05D016832 ORTHO05D000004 8.1e-54 213.4 101 100.0
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 2.9e-11 72.0 58 53.4
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.2e-09 66.6 58 48.3
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.1e-09 65.9 56 57.1
SGA_v2.0_scaffold28G11732 Striga asiatica HOM05D056663 ORTHO05D011213 3.6e-09 65.1 45 60.0
Lj6P383T11 Lonicera japonica HOM05D000003 ORTHO05D000004 4.7e-09 64.7 59 47.5
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 1.0e-08 63.5 58 43.1
SGA_v2.0_scaffold80G25827 Striga asiatica HOM05D016832 ORTHO05D000044 1.0e-08 63.5 52 53.8
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-08 63.2 58 51.7
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 5.2e-08 61.2 58 46.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 5.2e-08 61.2 52 53.8
SGA_v2.0_scaffold16G07893 Striga asiatica HOM05D016777 ORTHO05D026198 6.7e-08 60.8 54 46.3
Manes.05G055002 Manihot esculenta HOM05D000003 ORTHO05D000004 1.1e-07 60.1 53 50.9
Manes.06G043166 Manihot esculenta HOM05D000003 ORTHO05D000004 3.3e-07 58.5 53 49.1
SGA_v2.0_scaffold191G40478 Striga asiatica HOM05D000047 ORTHO05D000044 1.3e-06 56.6 63 42.9
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-06 56.2 58 41.4
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 2.8e-06 55.5 54 46.3
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.8e-06 55.5 51 49.0
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.8e-06 55.5 51 49.0
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-06 55.5 44 54.5
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 3.7e-06 55.1 55 47.3
Rhsim13G0170800 Rhododendron simsii HOM05D000101 ORTHO05D000089 3.7e-06 55.1 57 45.6
Nn6g35689 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.2e-06 53.9 51 49.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 8.2e-06 53.9 58 41.4


User provided reference genes

Program Settings