Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28257 Striga asiatica HOM05D001678 ORTHO05D001698 1.2e-91 339.7 161 100.0
SGA_v2.0_scaffold27G11443 Striga asiatica HOM05D001678 ORTHO05D001698 3.9e-58 228.4 175 66.3
SGA_v2.0_scaffold68G22889 Striga asiatica HOM05D001678 ORTHO05D001698 3.9e-58 228.4 175 66.3
SGA_v2.0_scaffold2614G54162 Striga asiatica HOM05D001678 ORTHO05D001698 9.6e-57 223.8 175 65.7
SGA_v2.0_scaffold1090G53835 Striga asiatica HOM05D001678 ORTHO05D001698 9.0e-55 217.2 175 64.0
SGA_v2.0_scaffold612G53189 Striga asiatica HOM05D001678 ORTHO05D001698 2.2e-53 212.6 169 62.1
SGA_v2.0_scaffold177G39408 Striga asiatica HOM05D001678 ORTHO05D001698 1.6e-51 206.5 167 62.9
SGA_v2.0_scaffold25G11062 Striga asiatica HOM05D001678 ORTHO05D001698 2.9e-45 185.7 131 71.0
Oeu035952.1 Olea europaea HOM05D001678 ORTHO05D001698 1.5e-22 110.2 184 36.4
Oeu043769.1 Olea europaea HOM05D001574 ORTHO05D001698 2.9e-21 105.9 182 36.8
Oeu015820.2 Olea europaea HOM05D001678 ORTHO05D001698 2.6e-17 92.8 101 47.5
Oeu059447.1 Olea europaea HOM05D001678 ORTHO05D001698 7.4e-17 91.3 98 44.9
Atru.chr6.779 Acer truncatum HOM05D001678 ORTHO05D001698 6.3e-16 88.2 185 31.9
SGA_v2.0_scaffold3280G54305 Striga asiatica HOM05D001678 ORTHO05D001698 4.1e-15 85.5 184 32.1
SGA_v2.0_scaffold296G47542 Striga asiatica HOM05D001678 ORTHO05D001698 2.6e-14 82.8 184 30.4
Atru.chr2.502 Acer truncatum HOM05D001678 ORTHO05D001698 4.5e-14 82.0 152 34.9
Oeu061131.1 Olea europaea HOM05D001678 ORTHO05D001698 1.0e-13 80.9 81 49.4
Prupe.7G073100 Prunus persica HOM05D001678 ORTHO05D001698 4.2e-12 75.5 150 33.3
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 5.5e-12 75.1 167 31.1
SGA_v2.0_scaffold230G43377 Striga asiatica HOM05D001678 ORTHO05D001698 1.2e-11 73.9 75 53.3
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 2.7e-11 72.8 166 33.1
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 4.7e-11 72.0 166 31.3
FvH4_6g24700 Fragaria vesca HOM05D001678 ORTHO05D001698 6.1e-11 71.6 151 31.1
Oeu029512.1 Olea europaea HOM05D001678 ORTHO05D001698 6.1e-11 71.6 142 33.8
FAN08G3647 Fragaria x ananassa HOM05D001678 ORTHO05D001698 8.0e-11 71.2 151 31.1
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 8.0e-11 71.2 151 31.1
FAN03G1731 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.0e-10 70.9 177 28.8
SGA_v2.0_scaffold27G11713 Striga asiatica HOM05D001678 ORTHO05D001698 1.0e-10 70.9 66 53.0
SGA_v2.0_scaffold97G29236 Striga asiatica HOM05D001678 ORTHO05D001698 1.0e-10 70.9 111 38.7
Atru.chr5.2760 Acer truncatum HOM05D001678 ORTHO05D001698 1.4e-10 70.5 109 34.9
Oeu051357.1 Olea europaea HOM05D001678 ORTHO05D001698 1.4e-10 70.5 165 27.3
RcHm_v2.0_Chr6g0297421 Rosa chinensis HOM05D001678 ORTHO05D001698 2.3e-10 69.7 146 30.8
RcHm_v2.0_Chr4g0409291 Rosa chinensis HOM05D001678 ORTHO05D001698 3.0e-10 69.3 149 30.9
Oeu004532.1 Olea europaea HOM05D001678 ORTHO05D001698 3.9e-10 68.9 130 35.4
FvH4_2g33311 Fragaria vesca HOM05D001678 ORTHO05D001698 6.7e-10 68.2 152 31.6
FAN24G2506 Fragaria x ananassa HOM05D001678 ORTHO05D001698 6.7e-10 68.2 152 31.6
RcHm_v2.0_Chr6g0281401 Rosa chinensis HOM05D001678 ORTHO05D001698 6.7e-10 68.2 145 31.0
Atru.chr6.809 Acer truncatum HOM05D001678 ORTHO05D001698 1.5e-09 67.0 98 35.7
Prupe.2G168600 Prunus persica HOM05D001678 ORTHO05D001698 2.0e-09 66.6 167 28.7
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 4.4e-09 65.5 166 27.1
FAN04G2958 Fragaria x ananassa HOM05D001678 ORTHO05D001698 5.7e-09 65.1 81 39.5
FAN08G2072 Fragaria x ananassa HOM05D001678 ORTHO05D001698 7.4e-09 64.7 112 33.0
Glyma.07G133600 Glycine max HOM05D001678 ORTHO05D001698 9.7e-09 64.3 162 29.0
RcHm_v2.0_Chr5g0019361 Rosa chinensis HOM05D001678 ORTHO05D001698 9.7e-09 64.3 150 30.0
Oeu041525.1 Olea europaea HOM05D001678 ORTHO05D001698 1.7e-08 63.5 78 42.3
Lj2A433T12 Lonicera japonica HOM05D001678 ORTHO05D001698 2.2e-08 63.2 131 31.3
Glyma.01G021800 Glycine max HOM05D001678 ORTHO05D001698 2.8e-08 62.8 125 32.0
Glyma.11G167500 Glycine max HOM05D001678 ORTHO05D001698 2.8e-08 62.8 128 31.2
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 2.8e-08 62.8 128 31.2
Atru.chr7.1165 Acer truncatum HOM05D001678 ORTHO05D001698 3.7e-08 62.4 98 33.7
Glyma.06G095100 Glycine max HOM05D001678 ORTHO05D001698 3.7e-08 62.4 128 31.2
Glyma.09G168100 Glycine max HOM05D001678 ORTHO05D001698 3.7e-08 62.4 128 31.2
Glyma.08G218300 Glycine max HOM05D001678 ORTHO05D001698 4.8e-08 62.0 117 32.5
Glyma.01G110000 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.04G175200 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.05G193100 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.06G182400 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.09G071200 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.09G096200 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.10G293700 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.12G113000 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.14G191800 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.15G150600 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.15G233800 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.18G175000 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 165 28.5
Glyma.19G032300 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.20G169100 Glycine max HOM05D001678 ORTHO05D001698 6.3e-08 61.6 128 31.2
Glyma.17G190600 Glycine max HOM05D001678 ORTHO05D001698 8.2e-08 61.2 163 27.6
Prupe.4G156100 Prunus persica HOM05D001678 ORTHO05D001698 1.1e-07 60.8 163 27.6
Atru.chr3.1756 Acer truncatum HOM05D001678 ORTHO05D001698 1.4e-07 60.5 91 35.2
Glyma.13G184400 Glycine max HOM05D001678 ORTHO05D001698 1.8e-07 60.1 128 30.5
Glyma.10G131100 Glycine max HOM05D001678 ORTHO05D001698 2.4e-07 59.7 154 28.6
Lj3C1037T5 Lonicera japonica HOM05D001678 ORTHO05D001698 2.4e-07 59.7 145 27.6
Glyma.10G200900 Glycine max HOM05D001678 ORTHO05D001698 3.1e-07 59.3 128 30.5
Atru.chr4.878 Acer truncatum HOM05D001678 ORTHO05D001698 4.1e-07 58.9 99 31.3
Glyma.14G095600 Glycine max HOM05D001678 ORTHO05D001698 5.3e-07 58.5 128 30.5
Glyma.01G126100 Glycine max HOM05D001678 ORTHO05D001698 7.0e-07 58.2 128 30.5
FvH4_2g00551 Fragaria vesca HOM05D001678 ORTHO05D001698 9.1e-07 57.8 164 26.2
Glyma.18G292500 Glycine max HOM05D001678 ORTHO05D001698 9.1e-07 57.8 128 30.5
Glyma.08G239700 Glycine max HOM05D001678 ORTHO05D001698 1.2e-06 57.4 128 29.7
FvH4_6g20420 Fragaria vesca HOM05D000034 ORTHO05D001698 1.6e-06 57.0 161 26.7
Atru.chr12.2214 Acer truncatum HOM05D001678 ORTHO05D001698 3.5e-06 55.8 143 30.1
Atru.chr13.2422 Acer truncatum HOM05D001678 ORTHO05D001698 4.5e-06 55.5 164 26.8
MD16G1269500 Malus domestica HOM05D001678 ORTHO05D001698 4.5e-06 55.5 75 37.3
Medtr6g018520 Medicago truncatula HOM05D001678 ORTHO05D001698 4.5e-06 55.5 117 30.8
Medtr6g025650 Medicago truncatula HOM05D001678 ORTHO05D001698 4.5e-06 55.5 117 30.8
Atru.chr5.2051 Acer truncatum HOM05D001678 ORTHO05D001698 7.7e-06 54.7 160 27.5
FAN09G4289 Fragaria x ananassa HOM05D001678 ORTHO05D001698 7.7e-06 54.7 112 30.4
Medtr1g106600 Medicago truncatula HOM05D001678 ORTHO05D001698 7.7e-06 54.7 117 30.8
Medtr1g106608 Medicago truncatula HOM05D001678 ORTHO05D001698 7.7e-06 54.7 117 30.8


User provided reference genes

Program Settings