Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28225 Striga asiatica HOM05D001282 ORTHO05D030923 2.0e-74 282.3 143 100.0
Oeu014178.4 Olea europaea HOM05D001282 ORTHO05D001236 3.6e-23 112.1 91 69.2
Oeu061966.1 Olea europaea HOM05D001282 ORTHO05D001236 3.4e-21 105.5 91 64.8
MSTRG.25254 Avicennia marina HOM05D001282 ORTHO05D001236 1.1e-19 100.5 94 59.6
SalBow7G3893 Salvia bowleyana HOM05D001282 ORTHO05D030923 2.4e-19 99.4 100 57.0
Migut.C00846 Erythranthe guttata HOM05D001282 ORTHO05D001236 7.0e-19 97.8 92 59.8
Oeu054477.3 Olea europaea HOM05D001282 ORTHO05D001236 6.6e-17 91.3 89 58.4
RhsimUnG0065600 Rhododendron simsii HOM05D001282 ORTHO05D001236 8.6e-17 90.9 90 61.1
vmacro04355 Vaccinium macrocarpon HOM05D001282 ORTHO05D001236 7.3e-16 87.8 89 58.4
vmacro22894 Vaccinium macrocarpon HOM05D001282 ORTHO05D001236 7.3e-16 87.8 89 58.4
CSS0037559 Camellia sinensis var. sinensis HOM05D001282 ORTHO05D001236 4.7e-15 85.1 91 56.0
Dinv31853 Davidia involucrata HOM05D001282 ORTHO05D001236 1.8e-14 83.2 92 58.7
Actinidia16992 Actinidia chinensis HOM05D001282 ORTHO05D001236 5.2e-14 81.6 88 55.7
Lj4A797G58 Lonicera japonica HOM05D001282 ORTHO05D001236 2.0e-13 79.7 89 48.3
CSS0038559 Camellia sinensis var. sinensis HOM05D001282 ORTHO05D001236 4.4e-13 78.6 91 54.9
CSS0001460 Camellia sinensis var. sinensis HOM05D001282 ORTHO05D001236 5.8e-13 78.2 89 56.2
Peaxi162Scf00553g01114 Petunia axillaris HOM05D001282 ORTHO05D001236 9.9e-13 77.4 91 49.5
Dinv39524 Davidia involucrata HOM05D001282 ORTHO05D001236 1.3e-12 77.0 92 55.4
Actinidia29754 Actinidia chinensis HOM05D001282 ORTHO05D030923 2.9e-12 75.9 89 55.1
CAN.G311.36 Capsicum annuum HOM05D001282 ORTHO05D001236 2.9e-12 75.9 91 50.5
Cc10_g01590 Coffea canephora HOM05D001282 ORTHO05D001236 3.7e-12 75.5 99 52.5
Thecc.08G045300 Theobroma cacao HOM05D001282 ORTHO05D001236 1.1e-11 73.9 91 46.2
PGSC0003DMG400009867 Solanum tuberosum HOM05D001282 ORTHO05D001236 1.4e-11 73.6 91 50.5
Lsat_1_v5_gn_2_9700 Lactuca sativa HOM05D001282 ORTHO05D001236 2.4e-11 72.8 99 46.5
Hma1.2p1_0023F.1_g015510 Hydrangea macrophylla HOM05D001282 ORTHO05D001236 7.1e-11 71.2 91 52.7
Actinidia37935 Actinidia chinensis HOM05D001282 ORTHO05D001236 9.2e-11 70.9 89 55.1
Nitab4.5_0011198g0020 Nicotiana tabacum HOM05D001282 ORTHO05D001236 1.2e-10 70.5 90 47.8
MD08G1012300 Malus domestica HOM05D001282 ORTHO05D001236 1.6e-10 70.1 91 46.2
GSVIVG01009920001 Vitis vinifera HOM05D001282 ORTHO05D001236 3.5e-10 68.9 93 48.4
CANSAT25G1017 Cannabis sativa HOM05D001282 ORTHO05D001236 4.6e-10 68.6 91 45.1
TAR536G0006 Trochodendron aralioides HOM05D001282 ORTHO05D001236 4.6e-10 68.6 89 51.7
Cpa.g.sc26.55 Carica papaya HOM05D001282 ORTHO05D001236 7.8e-10 67.8 91 48.4
Manes.05G146500 Manihot esculenta HOM05D001282 ORTHO05D001236 7.8e-10 67.8 90 50.0
Nitab4.5_0000337g0090 Nicotiana tabacum HOM05D001282 ORTHO05D001236 1.3e-09 67.0 94 51.1
MD15G1011300 Malus domestica HOM05D001282 ORTHO05D001236 1.7e-09 66.6 91 44.0
Prupe.1G364500 Prunus persica HOM05D001282 ORTHO05D001236 2.3e-09 66.2 91 49.5
DCAR_013873 Daucus carota HOM05D001282 ORTHO05D001236 3.0e-09 65.9 105 43.8
Manes.18G013100 Manihot esculenta HOM05D001282 ORTHO05D001236 3.0e-09 65.9 95 49.5
Solyc04g081510.4 Solanum lycopersicum HOM05D001282 ORTHO05D001236 3.0e-09 65.9 91 47.3
Sopen04g035120 Solanum pennellii HOM05D001282 ORTHO05D001236 3.0e-09 65.9 91 47.3
ECA233G2702 Erigeron canadensis HOM05D001282 ORTHO05D001236 6.6e-09 64.7 102 46.1
DCAR_016724 Daucus carota HOM05D001282 ORTHO05D001236 1.9e-08 63.2 103 42.7
Gohir.A05G186300 Gossypium hirsutum HOM05D001282 ORTHO05D001236 1.9e-08 63.2 87 44.8
COL.COLO4_26139 Corchorus olitorius HOM05D001282 ORTHO05D001236 5.6e-08 61.6 93 44.1
Gohir.D05G189200 Gossypium hirsutum HOM05D001282 ORTHO05D001236 5.6e-08 61.6 87 43.7
Gorai.009G194400 Gossypium raimondii HOM05D001282 ORTHO05D001236 5.6e-08 61.6 87 43.7
HanXRQChr14g0430431 Helianthus annuus HOM05D001282 ORTHO05D001236 5.6e-08 61.6 111 39.6
Duzib093G1760 Durio zibethinus HOM05D001282 ORTHO05D001236 7.3e-08 61.2 91 41.8
FAN20G0602 Fragaria x ananassa HOM05D001282 ORTHO05D001236 7.3e-08 61.2 92 43.5
FAN27G0043 Fragaria x ananassa HOM05D001282 ORTHO05D001236 7.3e-08 61.2 92 43.5
RcHm_v2.0_Chr6g0302951 Rosa chinensis HOM05D001282 ORTHO05D001236 7.3e-08 61.2 91 44.0
Nitab4.5_0003251g0030 Nicotiana tabacum HOM05D001282 ORTHO05D001236 9.5e-08 60.8 93 48.4
Lj4A23G22 Lonicera japonica HOM05D001282 ORTHO05D001236 1.2e-07 60.5 83 47.0
TAR381G1397 Trochodendron aralioides HOM05D001282 ORTHO05D001236 2.8e-07 59.3 89 44.9
Potri.002G021400 Populus trichocarpa HOM05D001282 ORTHO05D001236 3.6e-07 58.9 94 44.7
FvH4_2g38360 Fragaria vesca HOM05D001282 ORTHO05D001236 4.7e-07 58.5 92 44.6
FAN15G2243 Fragaria x ananassa HOM05D001282 ORTHO05D001236 4.7e-07 58.5 88 42.0
Peaxi162Scf00400g00105 Petunia axillaris HOM05D001282 ORTHO05D001236 6.2e-07 58.2 101 42.6
Eucgr.F00581 Eucalyptus grandis HOM05D001282 ORTHO05D001236 8.1e-07 57.8 91 51.6
unitig_32.g11224 Utricularia gibba HOM05D001282 ORTHO05D001236 1.4e-06 57.0 69 44.9
Lsat_1_v5_gn_8_30740 Lactuca sativa HOM05D001282 ORTHO05D001236 1.8e-06 56.6 101 41.6
Actinidia15426 Actinidia chinensis HOM05D001282 ORTHO05D001236 2.4e-06 56.2 75 48.0
Gohir.D02G098000 Gossypium hirsutum HOM05D001282 ORTHO05D001236 5.2e-06 55.1 93 37.6


User provided reference genes

Program Settings