Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 0.0e+00 1171.4 579 100.0
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 1.2e-263 912.9 530 84.7
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 3.7e-252 874.8 536 79.3
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.9e-248 862.4 538 79.6
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 1.1e-243 846.7 525 77.7
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 1.7e-233 812.8 528 74.8
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 5.1e-233 811.2 528 74.6
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.9e-232 809.3 524 75.0
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 4.4e-229 798.1 528 72.3
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 6.4e-228 794.3 528 72.9
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.2e-226 790.0 570 69.3
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.7e-225 786.2 525 73.3
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 3.9e-225 785.0 530 70.9
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.6e-223 779.6 526 72.8
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.2e-220 769.2 528 70.8
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.1e-219 766.9 560 67.7
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 2.4e-219 765.8 534 69.1
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.6e-218 763.1 526 70.2
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.7e-217 759.6 526 69.8
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.7e-217 759.6 529 71.1
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 8.7e-217 757.3 532 69.5
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 2.5e-216 755.7 527 70.0
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.6e-215 753.1 533 68.3
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.1e-214 750.4 529 68.6
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.4e-214 750.0 519 70.1
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 3.1e-214 748.8 555 66.7
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 3.1e-214 748.8 531 69.1
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 5.3e-214 748.0 526 69.4
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 5.3e-214 748.0 527 69.3
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.9e-212 742.3 536 68.7
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 6.4e-212 741.1 534 67.4
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.1e-211 740.3 522 70.7
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.1e-211 740.3 534 67.2
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.1e-210 736.1 530 68.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.0e-209 733.8 546 67.6
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.0e-209 733.8 532 68.0
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.7e-209 733.0 536 66.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 3.0e-209 732.3 529 67.5
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 8.7e-209 730.7 526 68.6
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 9.6e-208 727.2 525 65.7
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 8.1e-207 724.2 529 68.4
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 9.0e-206 720.7 537 67.0
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 1.7e-204 716.5 562 63.2
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.4e-203 713.4 532 64.7
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.4e-203 712.6 545 65.9
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 5.4e-203 711.4 532 64.3
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.3e-201 706.1 528 66.9
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 6.7e-201 704.5 529 64.8
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.4e-198 696.8 548 65.9
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 4.0e-198 695.3 523 66.3
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 4.0e-198 695.3 528 64.0
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 6.9e-198 694.5 529 65.0
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.6e-197 692.6 529 65.2
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 4.5e-197 691.8 530 65.7
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 5.8e-197 691.4 499 67.9
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.3e-196 690.3 533 64.9
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 2.9e-196 689.1 542 63.7
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 6.5e-196 688.0 530 65.5
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 4.2e-195 685.3 530 64.7
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 5.5e-195 684.9 504 64.5
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.8e-193 679.9 533 63.6
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.9e-192 676.4 528 61.4
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 1.6e-191 673.3 532 62.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.1e-191 672.9 523 63.1
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 6.2e-191 671.4 528 64.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 8.2e-191 671.0 528 64.0
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.1e-190 670.6 528 64.0
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 3.1e-190 669.1 549 60.5
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 2.6e-189 666.0 492 65.9
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 3.4e-189 665.6 517 62.5
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 7.6e-189 664.5 531 63.7
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 7.6e-189 664.5 479 68.3
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.7e-188 663.3 527 63.4
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 2.2e-188 662.9 525 64.4
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.2e-188 662.9 528 63.3
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.9e-185 652.1 613 56.4
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.3e-176 622.5 537 61.6
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 4.2e-171 605.5 527 59.6
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.0e-169 600.9 506 59.7
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 6.3e-167 591.7 523 58.5
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.8e-166 590.1 523 56.0
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 1.7e-159 567.0 538 52.0
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.8e-158 563.5 534 55.1
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.1e-158 562.8 584 52.4
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.5e-155 553.9 529 52.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.6e-154 549.3 629 49.1
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 3.4e-152 542.7 524 50.2
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 9.1e-150 534.6 523 53.2
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 1.0e-148 531.2 522 52.5
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 4.0e-145 519.2 552 53.4
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 4.9e-143 512.3 554 52.3
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.2e-141 507.7 530 49.2
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 2.3e-132 476.9 316 70.6
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 4.3e-131 472.6 521 46.3
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 7.5e-128 461.8 301 72.1
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 6.8e-121 438.7 301 69.4
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 4.4e-120 436.0 300 67.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.3e-111 407.9 551 44.5
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.7e-111 407.5 442 50.9
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.9e-95 353.6 244 71.3
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 4.9e-95 352.8 278 62.6
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.8e-84 317.8 641 30.6
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.6e-80 303.9 361 47.4
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 5.9e-72 276.2 222 62.6
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 7.6e-72 275.8 503 33.6
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 1.9e-70 271.2 205 65.9
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 3.9e-68 263.5 210 63.3
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.7e-60 236.1 223 54.7
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.5e-59 235.0 217 55.3
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.7e-59 233.0 217 54.8
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.8e-57 228.0 152 67.8
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 5.3e-57 226.5 570 30.5
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.8e-50 204.1 104 85.6
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 6.5e-47 193.0 221 46.6
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 7.2e-38 162.9 182 49.5
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.1e-33 147.1 85 72.9
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 9.1e-33 146.0 131 59.5
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.1e-29 134.8 324 30.9
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.7e-16 91.3 111 51.4
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 8.6e-15 86.3 48 81.2
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 2.2e-10 71.6 71 54.9
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 3.7e-10 70.9 71 54.9
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 1.1e-09 69.3 41 75.6
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 4.1e-09 67.4 108 41.7
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.0e-08 65.1 31 83.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.0e-08 65.1 31 83.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.0e-08 65.1 31 83.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.0e-08 65.1 31 83.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 6.0e-08 63.5 31 80.6
CAN.G93.25 Capsicum annuum HOM05D000544 ORTHO05D000137 2.3e-07 61.6 41 65.9
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 3.0e-07 61.2 45 64.4
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.1e-06 59.3 192 26.6


User provided reference genes

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