Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27721 Striga asiatica HOM05D001768 ORTHO05D403402 1.4e-71 272.7 129 100.0
SGA_v2.0_scaffold391G50611 Striga asiatica HOM05D001237 ORTHO05D406477 5.2e-29 131.3 85 75.3
SGA_v2.0_scaffold85G26577 Striga asiatica HOM05D001768 ORTHO05D405971 6.8e-29 131.0 65 92.3
SGA_v2.0_scaffold417G51238 Striga asiatica HOM05D001768 ORTHO05D400057 1.0e-21 107.1 79 69.6
SGA_v2.0_scaffold87G27187 Striga asiatica HOM05D001768 ORTHO05D400511 1.0e-21 107.1 79 69.6
SGA_v2.0_scaffold259G45833 Striga asiatica HOM05D001768 ORTHO05D404719 4.9e-11 71.6 44 75.0
SGA_v2.0_scaffold110G31170 Striga asiatica HOM05D001768 ORTHO05D399446 1.9e-10 69.7 48 68.8
SGA_v2.0_scaffold105G30516 Striga asiatica HOM05D001768 ORTHO05D399413 1.2e-09 67.0 41 73.2
SGA_v2.0_scaffold18G08485 Striga asiatica HOM05D001768 ORTHO05D001907 1.3e-08 63.5 64 53.1
SGA_v2.0_scaffold44G16864 Striga asiatica HOM05D001768 ORTHO05D001907 3.0e-08 62.4 64 53.1
Nitab4.5_0001961g0090 Nicotiana tabacum HOM05D001768 ORTHO05D001907 1.9e-07 59.7 64 53.1
Nitab4.5_0002356g0110 Nicotiana tabacum HOM05D001768 ORTHO05D001907 1.9e-07 59.7 64 53.1
Hma1.2p1_0415F.1_g148320 Hydrangea macrophylla HOM05D001768 ORTHO05D001907 3.3e-07 58.9 66 48.5
Lj3A892T32 Lonicera japonica HOM05D001768 ORTHO05D001907 3.3e-07 58.9 92 44.6
Nitab4.5_0000302g0020 Nicotiana tabacum HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 51.6
Nitab4.5_0005570g0040 Nicotiana tabacum HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 51.6
Solyc08g014550.3 Solanum lycopersicum HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 51.6
Solyc12g096700.2 Solanum lycopersicum HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 50.0
Sopen08g005520 Solanum pennellii HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 51.6
Sopen12g032530 Solanum pennellii HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 50.0
PGSC0003DMG400025212 Solanum tuberosum HOM05D001768 ORTHO05D001907 3.3e-07 58.9 64 51.6
Nitab4.5_0002123g0080 Nicotiana tabacum HOM05D001768 ORTHO05D001907 4.3e-07 58.5 64 51.6
CAN.G607.1 Capsicum annuum HOM05D001768 ORTHO05D001907 5.6e-07 58.2 64 50.0
CSS0000739 Camellia sinensis var. sinensis HOM05D001768 ORTHO05D001907 7.3e-07 57.8 64 50.0
CAN.G65.174 Capsicum annuum HOM05D001768 ORTHO05D001907 7.3e-07 57.8 64 50.0
PGSC0003DMG400029266 Solanum tuberosum HOM05D001768 ORTHO05D001907 7.3e-07 57.8 64 48.4
SGA_v2.0_scaffold141G35577 Striga asiatica HOM05D001768 ORTHO05D001907 7.3e-07 57.8 64 50.0
Hma1.2p1_0115F.1_g055630 Hydrangea macrophylla HOM05D001768 ORTHO05D001907 9.5e-07 57.4 64 50.0
Oeu037983.1 Olea europaea HOM05D001768 ORTHO05D001907 1.2e-06 57.0 64 50.0
Migut.F00133 Erythranthe guttata HOM05D001768 ORTHO05D001907 1.6e-06 56.6 64 48.4
Lj1A1030G30 Lonicera japonica HOM05D001768 ORTHO05D001907 1.6e-06 56.6 64 50.0
Sc19g0000450 Simmondsia chinensis HOM05D001768 ORTHO05D001907 1.6e-06 56.6 82 45.1
Solyc06g073310.3 Solanum lycopersicum HOM05D001768 ORTHO05D001907 1.6e-06 56.6 64 48.4
Sopen06g029670 Solanum pennellii HOM05D001768 ORTHO05D001907 1.6e-06 56.6 64 48.4
Dinv29199 Davidia involucrata HOM05D001768 ORTHO05D001907 2.1e-06 56.2 64 50.0
Sc13g0010630 Simmondsia chinensis HOM05D001768 ORTHO05D001907 2.1e-06 56.2 84 42.9
PGSC0003DMG400026910 Solanum tuberosum HOM05D001768 ORTHO05D001907 2.1e-06 56.2 64 48.4
vmacro06465 Vaccinium macrocarpon HOM05D001768 ORTHO05D001907 2.1e-06 56.2 64 48.4
MSTRG.8549 Avicennia marina HOM05D001768 ORTHO05D001907 2.8e-06 55.8 64 48.4
Oeu017362.1 Olea europaea HOM05D001768 ORTHO05D001907 2.8e-06 55.8 64 48.4
Rhsim03G0217400 Rhododendron simsii HOM05D001768 ORTHO05D001907 2.8e-06 55.8 64 48.4
SGA_v2.0_scaffold165G38195 Striga asiatica HOM05D001768 ORTHO05D001907 2.8e-06 55.8 64 48.4
ATR0579G173 Amborella trichopoda HOM05D001768 ORTHO05D001907 3.6e-06 55.5 75 44.0
Gohir.A12G243400 Gossypium hirsutum HOM05D001768 ORTHO05D001907 3.6e-06 55.5 57 50.9
Hund21076 Selenicereus undatus HOM05D001768 ORTHO05D001907 3.6e-06 55.5 83 43.4
TAR463G0006 Trochodendron aralioides HOM05D001768 ORTHO05D001907 3.6e-06 55.5 64 48.4
unitig_736.g22894 Utricularia gibba HOM05D001768 ORTHO05D001907 3.6e-06 55.5 64 48.4
unitig_90.g27505 Utricularia gibba HOM05D001768 ORTHO05D001907 3.6e-06 55.5 64 48.4
Nitab4.5_0000013g0110 Nicotiana tabacum HOM05D001768 ORTHO05D001907 4.7e-06 55.1 64 50.0
Gorai.008G262000 Gossypium raimondii HOM05D001768 ORTHO05D001907 6.2e-06 54.7 73 43.8
MBI18_g35653_MAGBIO Magnolia biondii HOM05D001768 ORTHO05D001907 6.2e-06 54.7 74 43.2
Nn1g09091 Nelumbo nucifera HOM05D001768 ORTHO05D001907 6.2e-06 54.7 64 46.9
Nn3g18752 Nelumbo nucifera HOM05D001768 ORTHO05D001907 6.2e-06 54.7 64 48.4
Peaxi162Scf01205g00034 Petunia axillaris HOM05D000037 ORTHO05D001907 6.2e-06 54.7 64 48.4
DCAR_020386 Daucus carota HOM05D002676 ORTHO05D003194 8.1e-06 54.3 64 48.4
Lalb_Chr11g0067511 Lupinus albus HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 48.4
Lalb_Chr23g0272021 Lupinus albus HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 48.4
Oeu061041.3 Olea europaea HOM05D001768 ORTHO05D001907 8.1e-06 54.3 63 47.6
SalBow4G0342 Salvia bowleyana HOM05D001768 ORTHO05D001907 8.1e-06 54.3 65 46.2
SalBow4G1998 Salvia bowleyana HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 46.9
SalBow4G2136 Salvia bowleyana HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 46.9
SalBow4G2355 Salvia bowleyana HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 46.9
Sp1g28650 Schrenkiella parvula HOM05D001768 ORTHO05D001907 8.1e-06 54.3 64 45.3
Solyc06g034380.1 Solanum lycopersicum HOM05D001768 ORTHO05D001907 8.1e-06 54.3 57 52.6


User provided reference genes

Program Settings