Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.3e-263 912.5 461 100.0
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 3.1e-193 678.7 460 76.5
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 3.0e-164 582.4 441 66.9
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 6.8e-164 581.3 457 65.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.6e-163 579.3 457 64.8
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.9e-162 575.1 473 63.6
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 1.8e-161 573.2 450 64.9
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.7e-160 569.3 460 63.9
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 2.9e-159 565.8 462 64.1
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.1e-158 563.9 450 65.1
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 4.3e-158 562.0 443 65.5
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 5.6e-158 561.6 454 64.3
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 9.5e-158 560.8 450 64.0
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.6e-157 560.1 450 64.2
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.6e-157 560.1 428 65.4
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 3.6e-157 558.9 407 69.3
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 4.7e-157 558.5 463 62.6
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 8.0e-157 557.8 428 65.7
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 8.0e-157 557.8 461 60.7
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.4e-156 557.0 440 63.9
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.4e-156 557.0 455 62.9
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 3.0e-156 555.8 448 63.6
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 5.2e-156 555.1 463 62.0
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 8.9e-156 554.3 453 63.4
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 8.9e-156 554.3 445 64.3
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.2e-155 553.9 443 64.1
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.5e-155 553.5 441 63.5
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.5e-155 553.5 461 62.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 9.8e-155 550.8 464 61.4
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.2e-154 549.7 463 61.3
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 6.4e-154 548.1 428 62.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 6.4e-154 548.1 464 61.0
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 8.3e-154 547.7 428 63.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 2.4e-153 546.2 462 60.6
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 9.2e-153 544.3 428 62.4
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.6e-152 542.0 460 61.3
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.3e-151 540.4 435 62.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 2.3e-151 539.7 444 63.7
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 5.0e-151 538.5 428 62.1
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 6.6e-151 538.1 436 61.9
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 4.3e-150 535.4 460 58.0
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 5.6e-150 535.0 428 61.7
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 7.3e-150 534.6 449 62.6
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 9.5e-150 534.3 431 63.1
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 9.5e-150 534.3 446 62.3
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 9.5e-150 534.3 444 59.9
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 2.8e-149 532.7 438 61.2
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 4.7e-149 531.9 433 61.7
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.8e-148 530.0 431 60.6
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 2.6e-147 526.2 442 61.5
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 3.7e-146 522.3 429 62.2
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 3.7e-146 522.3 439 61.5
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.9e-146 521.9 444 61.5
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.9e-145 520.0 437 60.4
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.4e-145 519.6 423 61.9
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.4e-145 519.6 453 60.3
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 9.2e-145 517.7 442 61.3
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 2.0e-144 516.5 443 61.2
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.7e-144 516.2 441 61.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 1.0e-143 514.2 469 57.8
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.3e-143 513.8 459 59.3
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 1.7e-143 513.5 443 60.7
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 6.6e-143 511.5 442 59.7
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 2.5e-142 509.6 426 61.3
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 3.3e-142 509.2 448 58.7
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 5.6e-142 508.4 460 57.8
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 8.1e-141 504.6 429 60.8
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 3.1e-140 502.7 448 61.2
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 3.1e-140 502.7 449 61.5
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 2.0e-139 500.0 449 61.2
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 3.4e-139 499.2 419 60.4
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 9.8e-139 497.7 449 61.0
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 8.3e-138 494.6 412 62.1
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.0e-135 487.6 480 57.5
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.1e-132 477.6 457 56.5
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 7.6e-131 471.5 473 55.2
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 2.3e-127 459.9 444 55.6
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 8.6e-127 458.0 492 52.0
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 4.7e-125 452.2 312 73.4
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.4e-124 450.7 428 53.5
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.0e-123 446.8 449 55.7
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 3.4e-123 446.0 428 53.0
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 6.4e-122 441.8 361 62.0
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 9.3e-121 438.0 725 38.9
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 7.8e-120 434.9 434 51.4
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.9e-119 432.6 424 53.8
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 4.2e-113 412.5 330 62.1
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.3e-111 406.8 429 48.5
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 8.1e-109 398.3 390 56.4
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 3.1e-108 396.4 299 63.9
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 3.2e-105 386.3 364 51.9
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 4.2e-105 386.0 309 61.5
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 2.1e-104 383.6 373 48.0
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 3.9e-103 379.4 319 59.6
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.9e-97 360.5 302 62.3
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.5e-97 360.1 311 59.8
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.5e-94 350.9 327 56.9
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.9e-94 350.5 327 57.8
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 1.3e-93 347.8 442 46.4
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 8.2e-93 345.1 384 47.4
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 6.5e-90 335.5 241 69.7
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.8e-85 320.1 400 47.8
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 7.7e-75 285.4 351 46.7
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.8e-66 256.5 214 60.3
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.6e-64 251.1 426 39.2
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.6e-64 250.0 231 57.6
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 4.7e-64 249.6 211 65.4
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.0e-62 244.2 211 60.2
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.6e-59 234.6 175 62.9
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 2.1e-56 224.2 211 55.9
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 6.8e-47 192.6 245 44.5
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.1e-44 185.3 136 66.2
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 5.6e-41 172.9 130 69.2
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.7e-40 169.9 172 51.7
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.2e-35 155.2 137 60.6
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 5.9e-35 152.9 135 60.7
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 4.4e-30 136.7 131 57.3
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 7.0e-28 129.4 99 63.6
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 2.3e-23 114.4 391 24.8
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.3e-23 114.4 402 26.6
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 3.4e-22 110.5 139 50.4
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 4.4e-22 110.2 140 37.1
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 7.1e-20 102.8 75 68.0
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 6.0e-19 99.8 372 24.7
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 7.1e-12 76.3 410 23.4
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 2.1e-11 74.7 80 52.5
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 4.0e-07 60.5 40 70.0


User provided reference genes

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