Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.1e-69 266.5 134 100.0
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 7.5e-47 190.7 132 72.0
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 3.6e-41 171.8 133 65.4
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 5.7e-39 164.5 134 61.9
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 5.7e-39 164.5 134 62.7
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 2.2e-38 162.5 132 62.1
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.4e-37 159.8 132 62.9
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 5.4e-37 157.9 133 60.2
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 7.0e-37 157.5 133 58.6
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 9.2e-37 157.1 133 61.7
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.6e-36 156.4 134 59.7
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 4.6e-36 154.8 143 56.6
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 5.9e-36 154.5 129 60.5
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 5.9e-36 154.5 129 62.8
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 1.3e-35 153.3 128 59.4
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 3.9e-35 151.8 136 60.3
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.9e-35 151.8 135 57.0
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 5.0e-35 151.4 134 58.2
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 6.6e-35 151.0 137 55.5
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 8.6e-35 150.6 135 59.3
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 1.5e-34 149.8 131 56.5
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 1.5e-34 149.8 131 58.0
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.9e-34 149.4 132 59.1
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 1.9e-34 149.4 132 62.9
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 1.9e-34 149.4 159 52.8
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 3.3e-34 148.7 134 61.9
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 7.3e-34 147.5 132 58.3
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 9.5e-34 147.1 131 55.7
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 2.1e-33 146.0 137 54.0
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 3.6e-33 145.2 144 55.6
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 4.7e-33 144.8 134 57.5
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 6.2e-33 144.4 128 60.2
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 8.0e-33 144.1 135 56.3
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 8.0e-33 144.1 133 60.2
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 1.0e-32 143.7 132 57.6
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 1.0e-32 143.7 128 60.2
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 1.8e-32 142.9 148 51.4
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 6.8e-32 141.0 149 55.0
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 6.8e-32 141.0 147 48.3
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 8.9e-32 140.6 130 55.4
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 8.9e-32 140.6 147 53.1
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 2.0e-31 139.4 147 53.7
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 4.4e-31 138.3 149 49.0
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 5.8e-31 137.9 149 49.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 5.8e-31 137.9 128 56.2
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 7.5e-31 137.5 160 48.8
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 2.9e-30 135.6 171 46.8
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 3.7e-30 135.2 132 56.8
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 2.4e-29 132.5 151 49.7
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 2.4e-29 132.5 163 49.1
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 3.2e-29 132.1 140 50.0
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 4.1e-29 131.7 132 53.8
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 4.1e-29 131.7 151 49.0
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 7.0e-29 131.0 168 44.0
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.2e-28 130.2 151 48.3
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 3.5e-28 128.6 162 46.3
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 6.0e-28 127.9 157 47.8
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 6.0e-28 127.9 134 50.0
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.0e-27 127.1 129 51.9
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.3e-27 126.7 157 44.6
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 3.0e-27 125.6 134 49.3
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 5.0e-27 124.8 131 54.2
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 1.5e-26 123.2 131 52.7
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.9e-26 122.9 168 42.9
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.3e-26 122.1 154 46.8
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 1.6e-25 119.8 161 44.1
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.6e-25 119.8 168 44.0
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 2.1e-25 119.4 150 46.7
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 2.1e-25 119.4 164 43.3
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 6.2e-25 117.9 158 42.4
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 1.8e-24 116.3 129 48.8
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 3.1e-24 115.5 151 43.7
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 6.8e-24 114.4 138 46.4
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.0e-23 112.8 149 43.6
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 4.4e-23 111.7 188 38.3
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 5.8e-23 111.3 162 43.8
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 9.8e-23 110.5 135 48.9
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 3.7e-22 108.6 134 46.3
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 4.9e-22 108.2 162 42.6
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 5.4e-21 104.8 139 40.3
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 2.7e-20 102.4 164 40.2
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 4.6e-20 101.7 133 39.8
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 6.0e-20 101.3 186 36.0
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 1.7e-19 99.8 164 38.4
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 6.6e-19 97.8 130 41.5
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 1.5e-18 96.7 94 52.1
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 1.5e-18 96.7 94 52.1
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.2e-17 93.6 102 53.9
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 1.2e-17 93.6 192 34.4
unitig_749.g13722 Utricularia gibba HOM05D006778 ORTHO05D008341 1.6e-17 93.2 90 54.4
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.4e-16 90.1 192 33.9
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 4.0e-16 88.6 78 62.8
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 4.0e-16 88.6 154 37.0
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 4.0e-16 88.6 129 41.1
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 5.2e-16 88.2 144 36.8
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 6.8e-16 87.8 122 46.7
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 8.9e-16 87.4 185 34.1
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 1.2e-15 87.0 63 61.9
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 3.7e-14 82.0 136 39.7
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 4.9e-14 81.6 122 45.9
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 2.4e-13 79.3 67 62.7
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 3.2e-13 79.0 106 48.1
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 4.1e-13 78.6 100 45.0
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 9.2e-13 77.4 110 40.9
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 1.2e-12 77.0 126 40.5
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 2.1e-12 76.3 96 46.9
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 3.5e-12 75.5 96 47.9
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 1.3e-11 73.6 67 56.7
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 1.7e-11 73.2 54 72.2
SalBow4G1478 Salvia bowleyana HOM05D006778 ORTHO05D008341 1.1e-10 70.5 54 66.7
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 1.9e-10 69.7 121 40.5
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 1.2e-09 67.0 51 66.7
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 3.4e-07 58.9 54 61.1
BraA03t14903Z Brassica rapa HOM05D006778 ORTHO05D008341 3.8e-06 55.5 47 61.7


User provided reference genes

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