Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04643 Striga asiatica HOM05D021674 ORTHO05D399068 1.5e-77 292.7 146 100.0
SGA_v2.0_scaffold347G49569 Striga asiatica HOM05D021674 ORTHO05D402548 9.7e-24 114.0 182 45.6
SGA_v2.0_scaffold88G27193 Striga asiatica HOM05D021674 ORTHO05D400168 2.2e-23 112.8 76 75.0
SGA_v2.0_scaffold30G12386 Striga asiatica HOM05D021674 ORTHO05D402565 5.3e-22 108.2 55 92.7
Migut.A00029 Erythranthe guttata HOM05D000407 ORTHO05D001717 2.1e-10 69.7 46 78.3
SGA_v2.0_scaffold20G09105 Striga asiatica HOM05D000407 ORTHO05D001717 4.7e-10 68.6 46 76.1
MSTRG.26015 Avicennia marina HOM05D000407 ORTHO05D001717 1.4e-09 67.0 46 73.9
Oeu010899.1 Olea europaea HOM05D000407 ORTHO05D001717 1.4e-09 67.0 46 73.9
SGA_v2.0_scaffold42G15991 Striga asiatica HOM05D021674 ORTHO05D404867 1.4e-09 67.0 139 40.3
SGA_v2.0_scaffold63G21765 Striga asiatica HOM05D021674 ORTHO05D406589 1.4e-09 67.0 139 40.3
SalBow4G0567 Salvia bowleyana HOM05D000407 ORTHO05D001717 2.3e-09 66.2 50 68.0
Dinv05000 Davidia involucrata HOM05D000407 ORTHO05D001717 2.0e-08 63.2 46 69.6
Aqoxy7G03630 Aquilegia oxysepala HOM05D000407 ORTHO05D001717 3.3e-08 62.4 46 67.4
Potri.006G256200 Populus trichocarpa HOM05D000407 ORTHO05D001717 3.3e-08 62.4 46 67.4
Sabra18G0028300 Salix brachista HOM05D000407 ORTHO05D001717 4.4e-08 62.0 46 67.4
Dinv18206 Davidia involucrata HOM05D000407 ORTHO05D001717 5.7e-08 61.6 46 67.4
DCAR_006211 Daucus carota HOM05D000407 ORTHO05D001717 7.5e-08 61.2 46 67.4
Potri.018G025800 Populus trichocarpa HOM05D000407 ORTHO05D001717 7.5e-08 61.2 46 65.2
Sabra06G0200400 Salix brachista HOM05D000407 ORTHO05D001717 7.5e-08 61.2 46 65.2
HPP92_017268 Vanilla planifolia HOM05D000407 ORTHO05D001717 7.5e-08 61.2 46 67.4
HPP92_017277 Vanilla planifolia HOM05D000407 ORTHO05D001717 7.5e-08 61.2 46 67.4
Cc08_g00470 Coffea canephora HOM05D000407 ORTHO05D001717 9.7e-08 60.8 46 65.2
CsaV3_3G046300 Cucumis sativus L. HOM05D000407 ORTHO05D001717 9.7e-08 60.8 46 60.9
MELO3C003711.2 Cucumis melo HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 58.7
HanXRQChr05g0134871 Helianthus annuus HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
Nitab4.5_0002042g0020 Nicotiana tabacum HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
Nitab4.5_0004664g0070 Nicotiana tabacum HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
PSO017G3169 Papaver somniferum HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
PSO170G1764 Papaver somniferum HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
vmacro05167 Vaccinium macrocarpon HOM05D000407 ORTHO05D001717 1.3e-07 60.5 46 65.2
ATR0800G173 Amborella trichopoda HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 65.2
CSS0046690 Camellia sinensis var. sinensis HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 67.4
Duzib168G1525 Durio zibethinus HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 65.2
QL02p021331 Quercus lobata HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 65.2
Sed0017679 Sechium edule HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 60.9
Thecc.09G022600 Theobroma cacao HOM05D000407 ORTHO05D001717 1.7e-07 60.1 46 65.2
CSS0010204 Camellia sinensis var. sinensis HOM05D000407 ORTHO05D001717 2.2e-07 59.7 46 65.2
CSS0023688 Camellia sinensis var. sinensis HOM05D000407 ORTHO05D001717 2.2e-07 59.7 46 65.2
CANSAT35G0300 Cannabis sativa HOM05D000407 ORTHO05D001717 2.2e-07 59.7 46 65.2
ClCG05G016780 Citrullus lanatus HOM05D000407 ORTHO05D001717 2.2e-07 59.7 46 60.9
Nitab4.5_0005785g0030 Nicotiana tabacum HOM05D000407 ORTHO05D001717 2.2e-07 59.7 70 47.1
CiPaw.08G010300 Carya illinoinensis HOM05D000407 ORTHO05D001717 2.8e-07 59.3 46 65.2
Phvul.008G201600 Phaseolus vulgaris HOM05D000407 ORTHO05D001717 2.8e-07 59.3 46 65.2
COL.COLO4_18877 Corchorus olitorius HOM05D000407 ORTHO05D001717 3.7e-07 58.9 46 63.0
vmacro11182 Vaccinium macrocarpon HOM05D000407 ORTHO05D001717 3.7e-07 58.9 46 65.2
CiPaw.07G224600 Carya illinoinensis HOM05D000407 ORTHO05D001717 4.8e-07 58.5 46 63.0
Manes.03G013400 Manihot esculenta HOM05D000407 ORTHO05D001717 4.8e-07 58.5 46 63.0
Nn2g12123 Nelumbo nucifera HOM05D000407 ORTHO05D001717 4.8e-07 58.5 46 65.2
Prupe.1G482600 Prunus persica HOM05D000407 ORTHO05D001717 4.8e-07 58.5 46 63.0
unitig_26.g9281 Utricularia gibba HOM05D000407 ORTHO05D001717 4.8e-07 58.5 79 44.3
Haze_21499 Corylus avellana HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
FvH4_2g28860 Fragaria vesca HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
FAN15G0146 Fragaria x ananassa HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
FAN20G2239 Fragaria x ananassa HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
FAN24G2495 Fragaria x ananassa HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
PGR044G1325 Punica granatum HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
TWI63G1401 Tripterygium wilfordii HOM05D000407 ORTHO05D001717 6.3e-07 58.2 46 63.0
Glyma.02G279100 Glycine max HOM05D000407 ORTHO05D001717 8.2e-07 57.8 46 63.0
Hund09286 Selenicereus undatus HOM05D000407 ORTHO05D001717 8.2e-07 57.8 46 63.0
Cfa013129 Carpinus fangiana HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 63.0
Lsat_1_v5_gn_5_30141 Lactuca sativa HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 63.0
Lj7A724T58 Lonicera japonica HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 63.0
Nn8g39557 Nelumbo nucifera HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 63.0
Sed0025937 Sechium edule HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 58.7
THA.LOC104803650 Tarenaya hassleriana HOM05D000407 ORTHO05D001717 1.1e-06 57.4 46 60.9
EL10Ac8g18729 Beta vulgaris HOM05D000407 ORTHO05D001717 1.4e-06 57.0 46 60.9
Dinv36476 Davidia involucrata HOM05D000407 ORTHO05D001717 1.4e-06 57.0 46 60.9
Sc09g0010230 Simmondsia chinensis HOM05D000407 ORTHO05D001717 1.4e-06 57.0 46 63.0
TAR383G0387 Trochodendron aralioides HOM05D000407 ORTHO05D001717 1.4e-06 57.0 46 60.9
TAR625G0015 Trochodendron aralioides HOM05D000407 ORTHO05D001717 1.4e-06 57.0 46 60.9
Aa31LG4G9810 Aethionema arabicum HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 58.7
Carub.0007s0841 Capsella rubella HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 58.7
Duzib187G1787 Durio zibethinus HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 60.9
Lsat_1_v5_gn_6_20721 Lactuca sativa HOM05D000407 ORTHO05D001717 1.8e-06 56.6 47 59.6
Sc18g0000330 Simmondsia chinensis HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 60.9
VMungo0647G0524 Vigna mungo HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 60.9
GSVIVG01035876001 Vitis vinifera HOM05D000407 ORTHO05D001717 1.8e-06 56.6 46 60.9
BcaC01g01039 Brassica carinata HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
A08p18340 Brassica napus HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
BolC3t21058H Brassica oleracea HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
BraA08t33791Z Brassica rapa HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
ECA246G4751 Erigeron canadensis HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
Thhalv10026196m.g Eutrema salsugineum HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
Gohir.A07G029200 Gossypium hirsutum HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
Gohir.D07G033200 Gossypium hirsutum HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
Gorai.001G034800 Gossypium raimondii HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
MD08G1156200 Malus domestica HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
MD15G1126900 Malus domestica HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 60.9
Nitab4.5_0000109g0410 Nicotiana tabacum HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 63.0
Sp7g29940 Schrenkiella parvula HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
THA.LOC104818614 Tarenaya hassleriana HOM05D000407 ORTHO05D001717 2.4e-06 56.2 46 58.7
AL7G19710 Arabidopsis lyrata HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 56.5
CARHR240080 Cardamine hirsuta HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 56.5
Cpa.g.sc217.14 Carica papaya HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 60.9
FAN27G0111 Fragaria x ananassa HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 60.9
HanXRQChr11g0353731 Helianthus annuus HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 63.0
Lsat_1_v5_gn_1_43440 Lactuca sativa HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 58.7
Medtr5g089370 Medicago truncatula HOM05D000407 ORTHO05D001717 3.1e-06 55.8 46 60.9
CAN.G1475.11 Capsicum annuum HOM05D000407 ORTHO05D001717 4.1e-06 55.5 46 60.9
Gohir.A13G181200 Gossypium hirsutum HOM05D000407 ORTHO05D001717 4.1e-06 55.5 46 58.7
Gohir.D13G189000 Gossypium hirsutum HOM05D000407 ORTHO05D001717 4.1e-06 55.5 46 58.7
Gorai.013G214400 Gossypium raimondii HOM05D000407 ORTHO05D001717 4.1e-06 55.5 46 58.7
TAR636G2697 Trochodendron aralioides HOM05D000407 ORTHO05D001717 4.1e-06 55.5 46 60.9
Actinidia14595 Actinidia chinensis HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 63.0
arahy.Tifrunner.gnm1.ann1.PAAG12 Arachis hypogaea HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
arahy.Tifrunner.gnm1.ann1.RR5P7Z Arachis hypogaea HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
EL10Ac2g04196 Beta vulgaris HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
HanXRQChr02g0050351 Helianthus annuus HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
Manes.16G123300 Manihot esculenta HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
TPR.G16414 Trifolium pratense HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
TWI34G1781 Tripterygium wilfordii HOM05D000407 ORTHO05D001717 5.3e-06 55.1 46 58.7
Eucgr.C02758 Eucalyptus grandis HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 60.9
Glyma.14G035500 Glycine max HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 60.9
Psat0s1021g0040 Pisum sativum HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 58.7
Solyc06g065950.4 Solanum lycopersicum HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 60.9
Sopen06g024430 Solanum pennellii HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 60.9
PGSC0003DMG400026142 Solanum tuberosum HOM05D000407 ORTHO05D001717 7.0e-06 54.7 46 60.9
Ah.16g104560 Amaranthus hybridus HOM05D000407 ORTHO05D001717 9.1e-06 54.3 46 56.5
AUR62011179 Chenopodium quinoa HOM05D000407 ORTHO05D001717 9.1e-06 54.3 46 58.7
Lalb_Chr04g0249241 Lupinus albus HOM05D000407 ORTHO05D001717 9.1e-06 54.3 46 56.5


User provided reference genes

Program Settings