Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 0.0e+00 1818.5 943 100.0
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 0.0e+00 1424.8 942 77.6
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 0.0e+00 1412.1 950 75.4
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 0.0e+00 1280.0 953 68.9
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 0.0e+00 1207.6 948 65.5
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 0.0e+00 1194.5 945 64.1
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 0.0e+00 1184.5 949 64.7
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 0.0e+00 1171.8 938 63.1
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 0.0e+00 1171.0 948 63.8
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1166.4 949 64.1
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1164.8 949 64.0
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1164.4 934 63.5
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 0.0e+00 1162.5 941 63.7
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 0.0e+00 1160.2 932 64.5
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1154.8 933 63.5
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 0.0e+00 1142.5 929 63.1
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 0.0e+00 1134.8 965 60.2
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 0.0e+00 1125.9 929 62.6
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 0.0e+00 1106.7 926 61.6
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1104.4 947 58.8
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 0.0e+00 1090.9 938 59.9
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1089.3 945 59.4
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1088.9 949 58.5
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 0.0e+00 1086.6 945 59.2
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 0.0e+00 1085.1 946 59.3
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 0.0e+00 1082.8 939 58.7
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 0.0e+00 1082.4 948 58.3
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1081.6 946 59.2
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 0.0e+00 1080.1 950 59.3
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 0.0e+00 1079.7 946 58.4
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 0.0e+00 1079.3 954 59.1
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 0.0e+00 1076.2 934 59.3
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 0.0e+00 1075.1 946 58.4
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 6.5e-312 1074.3 942 59.1
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 6.5e-312 1073.9 938 59.8
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 6.5e-312 1073.9 959 58.8
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 4.5e-311 1071.2 954 58.5
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 1.4e-309 1066.2 949 58.8
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 1.6e-308 1062.8 938 57.7
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 6.0e-308 1060.8 958 58.5
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 1.3e-307 1059.7 955 58.6
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 1.4e-304 1049.7 935 58.5
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 5.2e-304 1047.7 937 58.7
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 1.5e-303 1046.2 953 57.3
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 2.0e-303 1045.8 958 57.6
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 3.4e-303 1045.0 927 59.2
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 5.8e-303 1044.3 943 57.3
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 3.2e-301 1038.5 995 56.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 5.4e-301 1037.7 921 58.1
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 9.2e-301 1036.9 959 57.0
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 2.3e-299 1032.3 944 57.4
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 5.1e-299 1031.2 948 57.0
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 8.6e-299 1030.4 947 57.4
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 1.9e-298 1029.2 940 57.7
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 2.8e-297 1025.4 948 56.3
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 4.7e-297 1024.6 943 56.7
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 9.9e-295 1016.9 940 57.2
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 1.7e-294 1016.1 938 57.7
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 2.4e-293 1012.3 940 56.3
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 3.2e-293 1011.9 940 56.5
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 3.5e-292 1008.4 936 57.3
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 1.7e-291 1006.1 909 56.7
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 2.1e-289 999.2 940 55.4
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 2.1e-289 999.2 940 55.4
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 2.8e-289 998.8 909 56.2
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 6.2e-289 997.7 997 54.3
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 8.1e-289 997.3 943 56.0
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 1.4e-288 996.5 939 56.2
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 2.4e-288 995.7 940 55.3
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 6.9e-288 994.2 962 54.4
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 1.2e-287 993.4 947 54.9
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 2.0e-287 992.6 931 56.4
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 2.0e-287 992.6 935 55.3
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 4.6e-284 981.5 930 57.7
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 1.1e-280 970.3 953 54.1
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 4.5e-279 964.9 825 59.9
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 2.9e-278 962.2 853 59.0
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 1.1e-277 960.3 944 54.2
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 1.9e-277 959.5 937 56.0
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.3e-275 953.4 936 55.4
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 9.6e-274 947.2 902 55.5
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 2.2e-270 936.0 941 53.5
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 3.9e-267 925.2 770 62.1
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 7.1e-261 904.4 959 51.4
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 1.6e-260 903.3 807 58.2
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.9e-248 861.3 834 56.6
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 4.2e-245 852.0 698 63.2
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.5e-239 833.6 738 59.6
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 2.2e-238 829.7 850 51.3
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 2.5e-229 799.7 820 51.1
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 2.0e-223 780.0 940 45.3
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 1.4e-208 730.7 933 43.8
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 4.0e-203 712.6 654 58.1
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 1.7e-182 644.0 863 41.6
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 8.1e-180 635.2 976 39.4
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 1.1e-173 614.8 940 39.5
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 1.5e-162 577.8 486 59.3
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 3.0e-134 483.8 876 35.4
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 3.0e-134 483.8 740 40.4
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 2.0e-130 471.1 465 57.8
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.7e-129 468.0 438 57.8
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.9e-129 467.2 402 59.0
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 6.5e-129 466.1 892 33.7
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 2.1e-127 461.1 890 34.0
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 6.1e-127 459.5 424 54.5
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 8.8e-110 402.5 453 51.0
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.5e-96 358.6 427 48.9
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.0e-82 310.1 259 62.2
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.2e-62 243.8 199 56.8
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 5.1e-41 174.1 330 37.0
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.6e-40 169.9 336 36.0
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 5.8e-37 160.6 461 29.5
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 7.6e-37 160.2 345 31.9
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.9e-33 147.9 140 54.3
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 3.7e-31 141.4 118 61.0
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 5.5e-27 127.5 131 53.4
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.5e-21 109.4 117 48.7
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.0e-20 104.4 120 50.0
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 1.9e-19 102.4 149 43.6
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 1.2e-18 99.8 145 40.7
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 6.1e-18 97.4 113 47.8
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-17 96.7 70 67.1
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 5.1e-17 94.4 73 61.6
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.5e-16 92.8 73 60.3
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 5.7e-16 90.9 73 58.9
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 2.8e-15 88.6 73 56.2
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 3.7e-15 88.2 73 57.5
MCO15G701 Micromonas commoda HOM05D004953 ORTHO05D006193 4.5e-13 81.3 867 21.0
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.1e-11 76.6 61 59.0
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 1.4e-11 76.3 48 72.9
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 3.2e-11 75.1 61 60.7
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 2.7e-10 72.0 74 58.1
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.8e-09 69.3 57 64.9
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.0e-09 68.6 60 65.0
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 3.9e-09 68.2 125 36.8
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 1.1e-08 66.6 60 51.7
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 9.7e-08 63.5 55 50.9
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 2.8e-07 62.0 309 24.3
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.2e-07 60.5 55 49.1
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.1e-06 58.5 55 47.3
ATR0580G291 Amborella trichopoda HOM05D004953 ORTHO05D006193 7.0e-06 57.4 67 43.3


User provided reference genes

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