Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 0.0e+00 1161.7 564 100.0
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 2.5e-200 702.6 485 71.1
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 3.2e-200 702.2 482 72.8
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 3.7e-196 688.7 483 70.6
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 2.2e-188 662.9 493 67.7
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 7.7e-186 654.4 464 68.8
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 3.8e-185 652.1 455 70.5
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 1.1e-184 650.6 489 67.5
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 3.2e-184 649.0 463 69.8
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 3.2e-184 649.0 477 68.3
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 3.2e-184 649.0 471 68.6
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 9.4e-184 647.5 489 66.3
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 1.2e-183 647.1 494 67.8
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 1.2e-183 647.1 481 65.9
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 2.1e-183 646.4 476 68.1
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 6.1e-183 644.8 481 67.6
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 2.3e-182 642.9 400 77.2
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 3.0e-182 642.5 486 68.1
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.2e-181 640.6 479 66.2
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 1.5e-181 640.2 399 75.9
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 2.6e-181 639.4 479 69.3
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 5.7e-181 638.3 481 65.1
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 7.5e-181 637.9 481 64.7
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 2.2e-180 636.3 453 70.2
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 3.7e-180 635.6 487 65.1
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 6.3e-180 634.8 475 68.2
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 8.2e-180 634.4 479 66.8
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 8.2e-180 634.4 469 66.7
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 9.1e-179 630.9 479 66.6
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 2.7e-178 629.4 482 66.8
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 3.5e-178 629.0 421 71.3
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 4.5e-178 628.6 482 66.6
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 7.7e-178 627.9 482 66.4
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 7.7e-178 627.9 397 75.1
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 3.8e-177 625.5 436 69.7
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.1e-176 624.0 492 63.8
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.1e-176 624.0 426 71.4
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 1.1e-176 624.0 413 72.2
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 2.5e-176 622.9 487 64.7
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 1.2e-175 620.5 466 65.0
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 2.7e-175 619.4 399 73.9
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 3.6e-175 619.0 493 65.1
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 4.7e-175 618.6 442 67.2
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 6.1e-175 618.2 479 65.3
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 1.4e-174 617.1 484 62.4
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 4.0e-174 615.5 483 64.6
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 6.8e-174 614.8 458 64.8
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 3.4e-173 612.5 419 70.6
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 4.4e-173 612.1 451 68.3
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 7.5e-173 611.3 423 70.0
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 9.8e-173 610.9 452 66.6
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 1.7e-172 610.1 407 71.0
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 2.2e-172 609.8 462 65.4
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 4.8e-172 608.6 452 65.7
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 4.8e-172 608.6 481 63.8
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 8.3e-172 607.8 441 65.8
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 1.4e-171 607.1 475 64.0
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 1.8e-171 606.7 482 64.1
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 9.1e-171 604.4 458 64.2
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 5.9e-170 601.7 460 64.1
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 7.7e-170 601.3 479 63.3
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 7.7e-170 601.3 473 63.6
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.0e-169 600.9 460 64.1
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 1.0e-169 600.9 439 67.7
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 1.7e-169 600.1 460 63.9
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 1.7e-169 600.1 460 63.9
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 2.3e-169 599.7 468 65.0
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 2.9e-169 599.4 408 69.6
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 6.5e-169 598.2 433 68.4
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 8.6e-169 597.8 488 61.9
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 1.1e-168 597.4 429 66.4
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 9.5e-168 594.3 426 67.8
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 3.6e-167 592.4 463 64.1
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 3.6e-167 592.4 468 63.2
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 4.7e-167 592.0 474 63.9
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 4.0e-166 589.0 436 66.3
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 6.8e-166 588.2 424 67.9
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.0e-165 586.6 479 62.6
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 5.7e-165 585.1 457 63.2
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.7e-164 583.6 429 65.7
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 8.3e-164 581.3 394 70.3
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.4e-163 580.5 421 66.5
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 9.2e-163 577.8 490 59.8
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 2.0e-162 576.6 427 67.0
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 5.9e-162 575.1 402 67.7
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 5.9e-162 575.1 433 65.4
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 1.0e-161 574.3 396 69.7
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 5.6e-160 568.5 357 73.7
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 1.8e-158 563.5 442 64.9
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.2e-157 560.8 411 64.7
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 2.6e-157 559.7 360 74.2
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 6.4e-156 555.1 385 67.5
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 5.4e-155 552.0 412 67.7
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.5e-154 549.3 422 63.3
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 6.0e-154 548.5 488 59.8
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 1.9e-152 543.5 410 66.3
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 4.7e-151 538.9 358 73.2
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 1.3e-148 530.8 440 59.3
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 2.4e-147 526.6 452 58.2
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 5.4e-147 525.4 483 60.0
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 8.1e-143 511.5 356 65.4
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 2.9e-140 503.1 307 77.5
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 4.3e-136 489.2 396 62.6
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 6.2e-135 485.3 374 64.7
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 3.8e-132 476.1 397 59.7
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.1e-118 431.4 492 46.3
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 9.3e-115 418.3 398 51.0
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.1e-114 417.2 451 49.9
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.3e-113 413.7 407 49.4
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 5.1e-113 412.5 511 44.8
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 3.7e-111 406.4 312 65.1
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 1.1e-107 394.8 259 74.5
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 3.1e-102 376.7 438 43.6
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 4.2e-91 339.7 245 63.3
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 1.8e-89 334.3 294 61.9
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 9.4e-75 285.4 189 67.7
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 7.4e-72 275.8 163 79.1
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 5.7e-64 249.6 206 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 8.5e-60 235.7 264 48.9
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 6.8e-57 226.1 211 57.8
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 1.3e-52 211.8 167 62.9
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 4.7e-50 203.4 132 68.9
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 5.7e-48 196.4 142 65.5
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.4e-25 122.1 506 24.7
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 4.0e-25 120.6 459 25.1
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 1.3e-23 115.5 74 73.0
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 3.3e-19 100.9 384 28.6
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 3.6e-18 97.4 349 26.6
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 9.6e-11 72.8 166 32.5
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.7e-07 62.0 38 71.1
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.7e-07 62.0 38 71.1
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 2.2e-07 61.6 55 50.9
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 4.9e-07 60.5 55 56.4
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 9.3e-06 56.2 56 55.4


User provided reference genes

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