Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27402 Striga asiatica HOM05D001688 ORTHO05D001571 5.1e-57 224.2 111 100.0
SGA_v2.0_scaffold40G15411 Striga asiatica HOM05D001688 ORTHO05D001571 1.4e-11 73.2 43 79.1
SGA_v2.0_scaffold75G24799 Striga asiatica HOM05D001688 ORTHO05D001571 3.2e-11 72.0 43 76.7
MSTRG.19226 Avicennia marina HOM05D001688 ORTHO05D001571 6.1e-10 67.8 43 72.1
Migut.L01752 Erythranthe guttata HOM05D001688 ORTHO05D001571 1.4e-09 66.6 43 69.8
MSTRG.26653 Avicennia marina HOM05D001688 ORTHO05D001571 3.9e-09 65.1 43 67.4
unitig_22.g5116 Utricularia gibba HOM05D001688 ORTHO05D001571 2.5e-08 62.4 43 67.4
Cc06_g05200 Coffea canephora HOM05D001688 ORTHO05D001571 5.7e-08 61.2 43 62.8
SalBow3G0353 Salvia bowleyana HOM05D001688 ORTHO05D001571 2.2e-07 59.3 43 62.8
Rhsim03G0081700 Rhododendron simsii HOM05D001688 ORTHO05D001571 4.8e-07 58.2 42 57.1
CSS0049493 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 6.3e-07 57.8 43 55.8
Migut.J00993 Erythranthe guttata HOM05D001688 ORTHO05D001571 6.3e-07 57.8 43 58.1
MSTRG.10350 Avicennia marina HOM05D001688 ORTHO05D001571 8.2e-07 57.4 43 60.5
CAN.G1099.3 Capsicum annuum HOM05D001688 ORTHO05D001571 1.1e-06 57.0 43 62.8
CSS0011669 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 1.4e-06 56.6 43 58.1
Nitab4.5_0005447g0010 Nicotiana tabacum HOM05D001688 ORTHO05D001571 3.1e-06 55.5 43 62.8
PGSC0003DMG400008398 Solanum tuberosum HOM05D001688 ORTHO05D001571 3.1e-06 55.5 43 62.8
HanXRQChr11g0351131 Helianthus annuus HOM05D001688 ORTHO05D001571 4.1e-06 55.1 43 55.8
Lj2C128T7 Lonicera japonica HOM05D001688 ORTHO05D001571 9.1e-06 53.9 43 58.1
Nitab4.5_0000381g0300 Nicotiana tabacum HOM05D001688 ORTHO05D001571 9.1e-06 53.9 43 60.5


User provided reference genes

Program Settings