Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.2e-105 383.6 183 100.0
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 3.1e-51 205.7 163 62.6
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.1e-51 205.7 169 59.8
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 1.5e-50 203.4 164 62.2
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.8e-50 201.4 189 58.2
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.9e-48 196.4 168 57.7
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.1e-47 193.0 126 69.8
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.3e-46 190.3 174 57.5
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.9e-46 188.7 133 66.9
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.5e-45 186.8 121 70.2
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 9.6e-45 184.1 122 69.7
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.2e-44 183.7 122 67.2
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.6e-44 182.2 132 63.6
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.6e-44 182.2 168 56.5
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 3.6e-44 182.2 178 53.9
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 6.2e-44 181.4 175 51.4
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.1e-43 180.6 162 56.2
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.4e-43 180.3 172 54.1
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.4e-43 180.3 170 55.3
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.4e-43 180.3 118 70.3
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.4e-43 179.5 120 65.8
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 9.0e-43 177.6 149 58.4
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.5e-42 176.8 172 52.9
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.6e-42 176.0 118 69.5
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.4e-42 175.6 129 62.8
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.4e-42 175.6 129 62.8
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 4.4e-42 175.3 125 64.8
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.6e-42 174.5 128 62.5
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.6e-42 174.5 125 63.2
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.3e-41 173.7 150 55.3
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 2.9e-41 172.6 122 67.2
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.9e-41 171.8 170 53.5
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 8.4e-41 171.0 119 66.4
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.9e-40 169.9 169 52.7
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 4.2e-40 168.7 117 67.5
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 4.2e-40 168.7 115 66.1
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 9.3e-40 167.5 109 69.7
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 3.5e-39 165.6 132 59.8
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 6.0e-39 164.9 183 48.6
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 7.8e-39 164.5 146 56.8
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 3.0e-38 162.5 113 64.6
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 3.0e-38 162.5 118 65.3
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 6.6e-38 161.4 111 65.8
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 6.6e-38 161.4 114 60.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.5e-37 160.2 171 48.5
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.1e-36 156.4 138 58.7
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.1e-36 156.4 134 56.0
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 3.6e-36 155.6 108 59.3
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 3.1e-35 152.5 167 49.7
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 3.1e-35 152.5 167 49.7
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 6.9e-35 151.4 204 41.2
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 9.0e-35 151.0 131 52.7
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 2.0e-34 149.8 152 48.7
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.5e-34 148.7 96 65.6
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.5e-34 148.7 106 59.4
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.8e-34 148.3 106 59.4
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 9.9e-34 147.5 114 57.0
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 9.9e-34 147.5 106 61.3
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 9.9e-34 147.5 163 48.5
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.3e-33 147.1 111 62.2
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.7e-33 146.7 169 44.4
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.8e-33 145.6 125 51.2
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.4e-33 144.4 106 60.4
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.1e-32 144.1 168 45.2
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.1e-32 144.1 106 58.5
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.4e-32 143.7 117 53.8
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 1.4e-32 143.7 181 43.1
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 1.4e-32 143.7 131 51.1
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.9e-32 143.3 156 46.2
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 2.4e-32 142.9 170 42.9
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.2e-32 142.5 141 46.8
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 3.2e-32 142.5 183 42.6
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.2e-32 142.5 106 54.7
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.2e-32 142.5 227 37.0
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 3.2e-32 142.5 111 57.7
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 4.2e-32 142.1 109 59.6
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 5.4e-32 141.7 160 45.0
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 5.4e-32 141.7 104 61.5
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.4e-32 141.7 127 52.8
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 7.1e-32 141.4 127 53.5
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 7.1e-32 141.4 170 44.7
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 7.1e-32 141.4 139 48.2
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 9.3e-32 141.0 104 60.6
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 9.3e-32 141.0 104 59.6
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.2e-31 140.6 166 45.8
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.2e-31 140.6 137 50.4
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.2e-31 140.6 174 46.6
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 1.2e-31 140.6 106 54.7
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.6e-31 140.2 106 59.4
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.6e-31 140.2 106 59.4
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-31 140.2 173 43.4
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.6e-31 140.2 110 57.3
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.6e-31 140.2 104 60.6
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 2.1e-31 139.8 107 57.9
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.7e-31 139.4 107 58.9
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 3.5e-31 139.0 158 46.2
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.5e-31 139.0 180 41.7
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.6e-31 138.7 178 41.6
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 6.0e-31 138.3 167 41.3
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 7.9e-31 137.9 108 56.5
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 7.9e-31 137.9 129 50.4
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.0e-30 137.5 104 59.6
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.3e-30 137.1 111 56.8
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.3e-30 137.1 129 50.4
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.3e-30 137.1 124 52.4
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.8e-30 136.7 104 59.6
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.8e-30 136.7 151 46.4
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 1.8e-30 136.7 104 59.6
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.0e-30 136.0 105 59.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 3.9e-30 135.6 129 52.7
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 3.9e-30 135.6 104 59.6
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 6.7e-30 134.8 104 57.7
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 6.7e-30 134.8 105 56.2
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.1e-29 134.0 174 40.8
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 1.1e-29 134.0 132 46.2
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.1e-29 134.0 173 44.5
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.1e-29 134.0 104 58.7
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.5e-29 133.7 167 42.5
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.5e-29 133.7 108 56.5
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.9e-29 133.3 104 57.7
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.9e-29 133.3 108 57.4
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.5e-29 132.9 167 41.9
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.5e-29 132.9 167 41.9
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 2.5e-29 132.9 116 52.6
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.5e-29 132.9 162 42.6
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.5e-29 132.9 104 57.7
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 3.3e-29 132.5 105 55.2
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 3.3e-29 132.5 104 56.7
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 3.3e-29 132.5 104 55.8
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 4.3e-29 132.1 108 55.6
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.3e-29 132.1 104 58.7
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.6e-29 131.7 127 48.8
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 9.6e-29 131.0 126 48.4
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 9.6e-29 131.0 104 56.7
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.3e-28 130.6 106 56.6
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.3e-28 130.6 109 56.0
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.3e-28 130.6 104 57.7
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.6e-28 130.2 104 56.7
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.6e-28 130.2 117 52.1
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.1e-28 129.8 156 43.6
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.1e-28 129.8 156 43.6
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 2.1e-28 129.8 166 44.0
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.1e-28 129.8 108 54.6
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 2.8e-28 129.4 127 48.8
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 3.7e-28 129.0 153 42.5
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.7e-28 129.0 104 56.7
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 6.2e-28 128.3 104 55.8
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 6.2e-28 128.3 110 50.9
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.1e-27 127.5 127 48.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.4e-27 127.1 127 47.2
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.4e-27 127.1 104 55.8
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 1.8e-27 126.7 93 60.2
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.4e-27 126.3 101 57.4
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 3.1e-27 125.9 132 45.5
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 6.9e-27 124.8 104 52.9
SGA_v2.0_scaffold13G06559 Striga asiatica HOM05D003884 ORTHO05D004482 9.0e-27 124.4 100 66.0
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 9.0e-27 124.4 104 55.8
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.2e-26 124.0 101 52.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.5e-23 112.5 97 53.6
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 4.6e-23 112.1 62 77.4
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 1.8e-22 110.2 108 48.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.8e-22 110.2 108 48.1
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 6.7e-22 108.2 131 44.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 6.9e-19 98.2 82 58.5
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 1.7e-17 93.6 90 54.4
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 7.9e-15 84.7 62 56.5
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.0e-14 84.3 59 67.8
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 1.3e-14 84.0 100 43.0
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.8e-14 83.6 58 60.3
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 1.8e-14 83.6 97 47.4
CSS0019058 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.0e-14 82.8 144 41.7
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 8.7e-14 81.3 59 54.2
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 3.3e-13 79.3 54 66.7
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 7.4e-13 78.2 100 37.0
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 2.2e-12 76.6 52 55.8
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.8e-11 73.6 101 42.6
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.9e-11 71.6 54 57.4
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 3.4e-10 69.3 108 41.7
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 8.5e-09 64.7 54 55.6
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 8.5e-09 64.7 50 56.0
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 3.0e-06 56.2 59 44.1


User provided reference genes

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