Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 5.4e-143 511.1 291 100.0
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.2e-76 290.8 194 73.7
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 5.7e-76 288.5 209 68.9
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 5.7e-76 288.5 190 72.1
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 7.5e-76 288.1 192 72.9
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 1.3e-75 287.3 195 73.3
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 1.7e-75 287.0 194 72.7
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.8e-75 286.2 197 72.1
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 4.8e-75 285.4 195 73.3
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 8.3e-75 284.6 193 72.0
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 8.3e-75 284.6 194 71.1
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 8.3e-75 284.6 195 72.3
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 8.3e-75 284.6 193 72.5
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.1e-74 284.3 194 73.7
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 1.1e-74 284.3 196 71.9
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.1e-74 284.3 196 71.9
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.1e-74 284.3 194 73.7
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 1.4e-74 283.9 194 71.6
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 1.4e-74 283.9 194 71.6
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.4e-74 283.9 194 71.6
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.8e-74 283.5 212 68.4
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.4e-74 283.1 195 72.3
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 2.4e-74 283.1 196 71.4
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 2.4e-74 283.1 194 73.2
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 3.1e-74 282.7 196 71.9
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-74 282.7 197 71.6
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-74 282.7 197 71.6
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 3.1e-74 282.7 192 71.9
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.1e-74 282.7 195 71.3
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 4.1e-74 282.3 193 71.0
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 4.1e-74 282.3 192 71.4
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 4.1e-74 282.3 217 65.0
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 5.4e-74 282.0 198 70.7
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 7.0e-74 281.6 199 68.8
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 7.0e-74 281.6 190 71.6
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 7.0e-74 281.6 197 71.6
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 9.1e-74 281.2 194 71.6
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 9.1e-74 281.2 196 71.4
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.6e-73 280.4 197 71.1
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 1.6e-73 280.4 194 71.1
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 1.6e-73 280.4 190 70.0
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 3.5e-73 279.3 194 70.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 7.7e-73 278.1 198 68.2
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.0e-72 277.7 218 66.1
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.0e-72 277.7 218 66.1
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.0e-72 277.7 218 66.1
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.0e-72 277.7 218 66.1
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.0e-72 277.7 196 70.4
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.3e-72 277.3 209 67.5
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 1.7e-72 276.9 197 69.5
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.7e-72 276.9 218 65.6
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.3e-72 276.6 219 65.3
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.3e-72 276.6 198 69.2
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 3.8e-72 275.8 198 69.2
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 3.8e-72 275.8 195 70.3
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 3.8e-72 275.8 193 70.5
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 8.6e-72 274.6 196 69.9
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 1.1e-71 274.2 194 69.6
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.5e-71 273.9 196 68.4
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.5e-71 273.9 198 69.2
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.9e-71 273.5 198 68.2
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 5.5e-71 271.9 199 68.8
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 7.2e-71 271.6 216 65.3
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 9.5e-71 271.2 193 68.4
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 9.5e-71 271.2 209 67.9
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.2e-70 270.8 195 69.2
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.6e-70 270.4 201 67.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.6e-70 270.4 195 67.2
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 1.6e-70 270.4 195 67.2
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.6e-70 270.4 212 65.1
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.6e-70 270.4 195 69.2
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 2.1e-70 270.0 199 66.8
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 2.8e-70 269.6 206 65.5
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.8e-70 269.6 206 65.5
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 2.8e-70 269.6 206 65.5
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 3.6e-70 269.2 197 67.0
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 4.7e-70 268.9 197 66.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.7e-70 268.9 198 68.7
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 6.1e-70 268.5 201 66.2
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.0e-70 268.1 196 67.3
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 1.8e-69 266.9 199 66.3
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 2.3e-69 266.5 199 66.3
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 3.0e-69 266.2 203 65.5
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 3.0e-69 266.2 232 60.3
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 4.0e-69 265.8 199 65.3
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 1.5e-68 263.8 199 66.8
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.5e-68 263.8 198 66.2
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 1.5e-68 263.8 201 64.7
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 2.0e-68 263.5 206 63.6
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 3.4e-68 262.7 214 63.1
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 3.4e-68 262.7 225 60.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 4.4e-68 262.3 207 63.8
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 5.7e-68 261.9 199 64.3
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 7.5e-68 261.5 221 62.9
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.3e-67 260.8 211 62.6
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.3e-67 260.8 211 62.6
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 1.7e-67 260.4 206 63.6
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 2.8e-67 259.6 200 65.0
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.3e-67 258.5 211 62.1
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.3e-67 258.5 211 62.1
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.8e-66 256.9 198 65.2
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.8e-66 256.9 201 64.2
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.6e-65 253.8 197 61.4
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 6.6e-64 248.4 239 55.6
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 8.0e-62 241.5 220 57.7
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 7.5e-60 235.0 192 62.0
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 1.6e-57 227.3 193 57.5
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.7e-56 223.8 218 52.8
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.9e-55 220.3 214 54.2
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.6e-54 217.2 191 58.6
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.2e-53 212.2 182 59.3
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.2e-52 211.1 154 68.2
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 4.9e-51 205.7 182 58.2
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 4.1e-50 202.6 194 56.7
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 7.1e-50 201.8 140 68.6
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 7.8e-49 198.4 170 56.5
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 8.6e-48 194.9 196 53.6
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 6.8e-45 185.3 196 47.4
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.9e-43 179.9 121 71.1
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.1e-42 177.9 139 63.3
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 2.1e-41 173.7 118 68.6
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.7e-41 173.3 118 68.6
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.6e-39 165.6 103 77.7
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 1.6e-38 164.1 118 65.3
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.1e-34 151.4 204 40.2
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.9e-27 126.7 224 34.8
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 6.0e-25 119.0 173 39.3
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.4e-21 107.8 78 73.1
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.9e-19 100.1 74 68.9
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 7.9e-17 92.0 163 37.4
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 7.4e-15 85.5 48 81.2
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 3.7e-14 83.2 49 77.6
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.5e-12 77.8 46 76.1
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 6.7e-08 62.4 176 27.8
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.1e-07 61.6 173 30.6
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.1e-07 61.6 173 30.6
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 2.5e-07 60.5 174 26.4
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 7.4e-07 58.9 170 28.8
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 2.1e-06 57.4 173 28.3
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 6.2e-06 55.8 174 27.0


User provided reference genes

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