Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 0.0e+00 1787.3 929 100.0
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 5.3e-293 1011.1 946 60.6
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.9e-282 976.1 938 58.2
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 1.1e-229 800.8 928 50.9
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 1.1e-194 684.5 933 45.9
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 7.4e-194 681.8 956 44.9
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 4.5e-191 672.5 939 44.0
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 2.1e-188 663.7 942 44.4
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 6.1e-188 662.1 961 44.2
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 8.8e-187 658.3 961 44.3
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.4e-184 651.0 931 45.5
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 3.1e-184 649.8 963 43.4
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 4.1e-184 649.4 960 44.2
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 2.2e-182 643.7 953 44.4
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 4.5e-175 619.4 955 42.8
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 5.9e-175 619.0 955 41.7
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 2.9e-174 616.7 950 41.5
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 3.2e-173 613.2 959 41.6
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 7.2e-173 612.1 958 41.5
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 1.0e-171 608.2 943 42.3
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 3.0e-171 606.7 956 41.2
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 8.3e-169 598.6 949 41.6
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 1.4e-168 597.8 961 41.6
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.8e-168 597.4 940 42.0
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 5.4e-168 595.9 955 40.8
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 4.5e-167 592.8 971 40.1
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 7.7e-167 592.0 944 41.0
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 1.7e-166 590.9 957 40.8
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 5.2e-163 579.3 956 40.7
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 7.5e-162 575.5 938 40.4
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.8e-161 573.5 938 40.3
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 8.3e-161 572.0 939 40.4
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 3.1e-160 570.1 968 39.8
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 5.9e-159 565.8 949 40.5
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 2.9e-158 563.5 962 39.5
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 6.1e-156 555.8 820 42.3
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 3.0e-155 553.5 817 42.1
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 1.8e-152 544.3 814 40.9
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 4.3e-149 533.1 815 40.7
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 2.8e-148 530.4 935 39.0
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.0e-147 528.5 985 36.5
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 4.0e-147 526.6 926 38.7
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 6.8e-147 525.8 922 39.7
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 6.8e-147 525.8 905 38.8
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 6.4e-145 519.2 933 38.9
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 1.4e-144 518.1 925 38.3
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 5.4e-144 516.2 933 38.5
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 2.0e-143 514.2 674 47.5
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 1.0e-142 511.9 953 37.3
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 3.0e-142 510.4 937 38.6
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 3.1e-139 500.4 941 36.8
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 5.2e-139 499.6 931 39.0
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 1.9e-136 491.1 929 37.4
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 1.0e-134 485.3 680 45.6
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 3.9e-134 483.4 938 36.5
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 5.1e-134 483.0 835 39.5
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.2e-132 478.4 930 37.0
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 6.8e-131 472.6 940 36.4
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 2.0e-130 471.1 956 35.4
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 7.6e-130 469.2 937 36.1
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 4.1e-128 463.4 930 35.4
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 7.1e-128 462.6 927 35.7
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 1.2e-127 461.8 975 35.3
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 1.7e-126 458.0 949 35.8
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 1.5e-125 454.9 935 35.8
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 4.3e-125 453.4 725 41.1
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 2.1e-124 451.1 965 35.1
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 8.1e-124 449.1 965 34.9
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 4.0e-123 446.8 713 41.9
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 5.8e-122 443.0 940 35.2
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 9.9e-122 442.2 939 35.1
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 1.7e-121 441.4 943 35.7
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 3.8e-121 440.3 703 39.7
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 6.4e-121 439.5 931 35.8
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 6.4e-121 439.5 949 35.0
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 2.4e-120 437.6 940 35.5
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 8.7e-118 429.1 931 35.3
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 9.6e-117 425.6 655 41.8
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 9.6e-117 425.6 665 41.1
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 2.0e-114 417.9 563 45.5
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 2.9e-113 414.1 1164 30.2
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.9e-112 411.4 801 36.7
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.1e-107 394.0 813 35.8
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 1.5e-106 391.7 688 40.1
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 6.0e-103 379.8 559 42.8
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 8.2e-100 369.4 735 36.6
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.8e-92 344.4 623 38.0
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 9.3e-88 329.3 498 43.8
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 1.5e-82 312.0 647 35.7
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 5.9e-82 310.1 353 53.5
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 3.0e-78 297.7 480 42.5
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 3.3e-77 294.3 439 44.0
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 4.4e-77 293.9 500 38.6
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 2.8e-76 291.2 376 44.7
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 7.2e-72 276.6 714 30.5
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.4e-70 272.3 952 28.0
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.2e-68 265.0 500 37.4
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 1.6e-66 258.8 785 31.5
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 2.0e-66 258.5 341 45.2
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 9.1e-51 206.5 468 34.2
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 7.5e-45 186.8 440 33.0
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 2.5e-40 171.8 277 40.4
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 1.2e-39 169.5 867 25.5
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.6e-39 169.1 595 28.6
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 2.6e-37 161.8 192 52.1
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 5.8e-37 160.6 278 41.7
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.1e-35 156.4 348 33.6
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 1.7e-33 149.1 373 31.4
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 1.5e-32 146.0 362 30.7
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 4.3e-32 144.4 258 36.8
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 9.5e-24 116.7 185 38.9
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 2.1e-23 115.5 343 29.2
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 1.7e-20 105.9 122 48.4
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.9e-12 78.6 104 45.2
CARHR220410 Cardamine hirsuta HOM05D006201 ORTHO05D007178 3.5e-10 71.6 129 38.0
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 1.5e-08 66.2 80 41.2
Rhsim05G0204900 Rhododendron simsii HOM05D006201 ORTHO05D007178 9.0e-06 57.0 51 58.8


User provided reference genes

Program Settings