Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 6.9e-287 989.9 500 100.0
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.7e-189 666.4 474 72.8
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.3e-186 656.0 480 70.6
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 4.0e-186 655.2 469 70.8
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.1e-178 630.6 484 66.9
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 2.6e-177 625.9 496 64.5
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 8.7e-165 584.3 519 60.9
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 8.1e-163 577.8 470 61.7
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 8.1e-163 577.8 500 59.6
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 9.9e-161 570.9 487 61.6
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.0e-157 559.3 459 61.7
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 5.1e-157 558.5 496 59.5
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.5e-156 556.2 464 61.9
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 1.1e-154 550.8 479 60.3
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.2e-153 547.4 481 59.5
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.6e-153 546.2 455 60.7
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 7.6e-153 544.7 455 59.8
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 7.6e-153 544.7 459 59.7
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 7.6e-153 544.7 498 58.2
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 2.9e-152 542.7 462 59.3
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 3.8e-152 542.3 485 58.6
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.8e-152 542.3 454 58.8
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 6.4e-152 541.6 455 60.7
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.1e-151 540.8 479 58.0
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.1e-151 540.8 461 59.0
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 4.2e-151 538.9 476 59.5
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 7.1e-151 538.1 454 59.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 9.3e-151 537.7 460 58.0
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 9.3e-151 537.7 480 57.5
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.2e-150 537.3 454 59.0
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.1e-150 536.6 488 59.6
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 2.7e-150 536.2 455 59.6
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 6.0e-150 535.0 449 59.9
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 7.9e-150 534.6 456 59.2
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.0e-149 534.3 459 58.8
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.3e-149 533.9 459 58.6
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 3.9e-149 532.3 460 58.9
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.1e-148 530.8 484 58.3
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.1e-148 530.8 456 58.6
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.5e-148 530.4 455 59.1
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.5e-148 530.4 456 59.9
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.5e-148 529.6 459 59.0
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 7.4e-148 528.1 456 61.4
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 7.4e-148 528.1 487 56.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 7.4e-148 528.1 455 58.5
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 9.6e-148 527.7 459 57.3
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.3e-147 527.3 470 56.6
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.6e-147 526.9 455 58.9
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.7e-147 525.8 455 59.1
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 6.2e-147 525.0 462 56.9
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.1e-146 524.2 475 56.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 4.0e-146 522.3 459 57.1
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 4.0e-146 522.3 455 57.8
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 6.9e-146 521.5 482 55.4
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.2e-145 520.8 455 58.5
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 1.2e-145 520.8 458 57.4
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.0e-145 520.0 465 55.5
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.4e-145 519.2 456 57.7
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 5.8e-145 518.5 462 55.6
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.2e-144 516.5 476 56.5
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.2e-144 516.5 480 58.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 2.9e-144 516.2 452 57.7
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.1e-143 514.2 482 58.1
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.1e-143 514.2 482 58.1
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 1.4e-143 513.8 463 53.8
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 3.2e-143 512.7 459 56.0
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 7.1e-143 511.5 458 56.8
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.1e-142 510.0 472 53.4
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 6.7e-141 505.0 491 53.8
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 9.7e-140 501.1 461 55.1
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 1.5e-137 493.8 480 53.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.2e-134 484.2 449 53.9
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 2.7e-134 483.0 348 67.0
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 7.9e-134 481.5 453 53.0
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.9e-134 481.5 454 54.4
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.0e-133 481.1 347 66.9
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.4e-133 480.7 453 52.8
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.4e-133 480.7 447 53.7
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.1e-132 477.6 482 51.7
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.1e-132 477.6 316 70.6
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 3.3e-132 476.1 454 53.1
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 4.3e-132 475.7 457 53.2
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.3e-132 475.7 452 52.9
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.3e-131 474.2 451 52.8
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.7e-131 473.8 454 52.9
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 2.2e-131 473.4 450 51.3
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.2e-131 473.4 447 51.5
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 2.2e-131 473.4 333 67.3
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.1e-130 471.1 452 53.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.1e-130 471.1 457 52.5
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.4e-130 469.9 487 50.7
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.2e-129 467.6 316 70.9
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 5.0e-128 462.2 407 55.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.7e-123 447.2 522 45.8
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 2.2e-123 446.8 410 55.9
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 8.2e-123 444.9 313 67.4
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.7e-115 419.5 402 51.0
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.9e-112 409.8 313 62.9
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.9e-111 407.1 459 46.0
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.6e-108 396.7 286 65.7
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 8.0e-102 375.2 398 48.7
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.4e-100 369.8 379 49.6
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 3.7e-99 366.3 330 56.4
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 6.6e-96 355.5 482 46.7
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.5e-95 354.4 329 56.2
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.8e-94 350.1 416 43.8
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 8.0e-94 348.6 326 56.4
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.6e-92 343.6 344 49.4
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.0e-88 331.6 232 66.4
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.8e-85 320.9 366 47.0
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.1e-85 320.1 398 42.7
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.0e-84 317.4 287 57.5
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.0e-80 305.1 285 50.2
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 2.1e-78 297.4 267 57.7
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-77 295.0 322 50.3
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.4e-74 283.9 263 53.6
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 2.6e-68 263.8 158 77.2
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.7e-67 261.2 257 50.2
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 9.2e-66 255.4 193 61.1
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.9e-55 221.1 222 47.7
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.5e-55 220.7 163 66.9
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 6.6e-48 196.1 144 67.4
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.7e-32 142.9 290 31.0
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-31 141.7 194 46.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 7.4e-31 139.4 200 48.5
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.8e-29 134.8 118 54.2
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 3.1e-29 134.0 112 53.6
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 3.8e-27 127.1 201 40.8
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.7e-12 76.3 106 44.3
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 6.5e-11 73.2 46 67.4


User provided reference genes

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