Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25827 Striga asiatica HOM05D016832 ORTHO05D000044 2.6e-172 608.6 308 100.0
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 9.9e-10 68.6 58 55.2
SGA_v2.0_scaffold28G11732 Striga asiatica HOM05D056663 ORTHO05D011213 1.3e-09 68.2 48 58.3
SGA_v2.0_scaffold298G47652 Striga asiatica HOM05D016832 ORTHO05D000004 1.3e-09 68.2 158 28.5
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 3.7e-09 66.6 58 48.3
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 4.9e-09 66.2 80 41.2
SGA_v2.0_scaffold102G29912 Striga asiatica HOM05D016832 ORTHO05D402802 4.9e-09 66.2 116 31.9
SGA_v2.0_scaffold154G37091 Striga asiatica HOM05D016832 ORTHO05D000044 4.9e-09 66.2 138 26.8
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.3e-09 65.5 59 49.2
SGA_v2.0_scaffold94G28593 Striga asiatica HOM05D016832 ORTHO05D000004 1.9e-08 64.3 52 53.8
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-08 63.5 58 43.1
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 7.1e-08 62.4 71 40.8
Nn6g35689 Nelumbo nucifera HOM05D000003 ORTHO05D000004 9.2e-08 62.0 61 47.5
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 1.2e-07 61.6 58 43.1
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-07 61.2 57 49.1
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-07 60.8 61 47.5
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 60.1 115 34.8
Nn1g02030 Nelumbo nucifera HOM05D000003 ORTHO05D004093 4.6e-07 59.7 49 51.0
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-07 59.7 52 50.0
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-06 58.2 134 25.4
SGA_v2.0_scaffold191G40478 Striga asiatica HOM05D000047 ORTHO05D000044 1.3e-06 58.2 57 43.9
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-06 58.2 59 40.7
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.3e-06 58.2 72 43.1
Rhsim01G0076000 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 89 36.0
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 132 26.5
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-06 57.8 49 51.0
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 1.7e-06 57.8 83 36.1
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 93 33.3
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 109 34.9
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-06 56.6 62 41.9
TWI09G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.9e-06 56.6 64 32.8


User provided reference genes

Program Settings