Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 0.0e+00 1169.8 570 100.0
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 2.4e-280 968.4 569 82.1
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.2e-279 966.1 575 81.7
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 8.7e-278 959.9 575 81.6
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.5e-277 959.1 571 80.7
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 2.5e-277 958.4 567 80.4
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 5.6e-277 957.2 556 82.7
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 2.8e-276 954.9 571 80.4
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 3.6e-276 954.5 571 80.6
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.1e-275 953.0 572 80.1
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.8e-275 952.2 572 80.9
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 2.4e-275 951.8 557 82.4
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 3.1e-275 951.4 570 80.0
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 6.9e-275 950.3 543 83.4
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 1.2e-274 949.5 543 83.2
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-274 949.1 543 83.2
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 2.0e-274 948.7 543 83.2
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 2.6e-274 948.3 575 80.0
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 5.8e-274 947.2 543 83.2
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 5.8e-274 947.2 560 82.1
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 2.2e-273 945.3 553 82.3
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 2.9e-273 944.9 563 79.9
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 3.8e-273 944.5 553 81.7
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 3.8e-273 944.5 543 83.6
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 8.4e-273 943.3 550 82.0
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 8.4e-273 943.3 555 81.8
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 8.4e-273 943.3 556 82.0
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 1.4e-272 942.6 550 82.0
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 1.9e-272 942.2 554 82.3
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 4.2e-272 941.0 554 82.1
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 4.2e-272 941.0 553 81.9
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 1.2e-271 939.5 544 82.5
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.2e-271 939.5 554 81.9
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 6.0e-271 937.2 556 80.0
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.7e-270 935.6 556 79.9
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 1.7e-270 935.6 543 82.1
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 3.0e-270 934.9 550 82.4
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 3.0e-270 934.9 555 79.6
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 3.9e-270 934.5 555 79.8
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 3.9e-270 934.5 581 77.3
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 5.1e-270 934.1 554 80.5
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 5.1e-270 934.1 543 81.8
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 6.6e-270 933.7 557 80.3
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 2.5e-269 931.8 567 79.0
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 3.3e-269 931.4 543 81.4
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 3.3e-269 931.4 554 80.5
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 4.3e-269 931.0 564 80.1
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 5.6e-269 930.6 560 81.1
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 7.3e-269 930.2 543 80.7
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 7.3e-269 930.2 573 78.2
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 1.3e-268 929.5 544 81.2
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 1.6e-268 929.1 552 81.3
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 2.1e-268 928.7 543 81.2
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 4.8e-268 927.5 554 79.8
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 6.2e-268 927.2 548 81.8
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 6.2e-268 927.2 543 81.2
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 1.1e-267 926.4 550 81.3
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 1.4e-267 926.0 543 81.0
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 3.1e-267 924.9 553 80.1
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 4.0e-267 924.5 548 81.8
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 4.0e-267 924.5 543 81.0
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 5.3e-267 924.1 548 81.4
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 1.2e-266 922.9 553 80.1
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 2.6e-266 921.8 543 80.7
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 4.5e-266 921.0 543 80.3
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 4.5e-266 921.0 549 80.3
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 7.6e-266 920.2 547 79.3
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 9.9e-266 919.8 549 80.1
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 1.7e-265 919.1 544 80.7
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 1.7e-265 919.1 543 80.5
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 1.7e-265 919.1 543 80.3
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 2.2e-265 918.7 543 79.9
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 2.2e-265 918.7 543 80.5
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 6.4e-265 917.1 547 79.3
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 8.4e-265 916.8 559 77.8
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 1.4e-264 916.0 543 80.1
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 2.4e-264 915.2 543 80.5
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 3.2e-264 914.8 551 80.2
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 5.4e-264 914.1 543 79.9
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 2.7e-263 911.8 543 80.5
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 3.5e-263 911.4 547 79.7
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 3.5e-263 911.4 559 77.5
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 3.9e-262 907.9 544 78.9
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 8.7e-262 906.7 546 80.0
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 2.5e-261 905.2 546 79.7
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 5.6e-261 904.0 542 80.4
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 9.6e-261 903.3 544 78.9
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 5.8e-258 894.0 551 77.9
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 3.8e-257 891.3 552 76.4
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 8.4e-257 890.2 526 82.5
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 7.1e-256 887.1 543 77.7
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 1.2e-255 886.3 520 82.1
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.1e-248 863.2 547 75.5
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 2.5e-248 862.1 543 76.1
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 5.5e-248 860.9 549 75.4
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 1.0e-246 856.7 543 74.6
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 8.7e-246 853.6 551 76.6
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.5e-245 852.0 561 73.6
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 4.3e-245 851.3 541 76.0
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 9.7e-245 850.1 540 75.4
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 1.3e-244 849.7 495 81.2
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.6e-244 849.4 540 75.2
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 3.1e-243 845.1 557 73.8
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 5.9e-242 840.9 551 74.8
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 2.7e-239 832.0 557 70.9
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 8.8e-238 827.0 572 71.7
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 3.9e-230 801.6 550 72.9
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 4.1e-227 791.6 551 69.1
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 2.2e-225 785.8 543 69.8
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 9.4e-224 780.4 559 70.3
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 3.0e-222 775.4 559 66.7
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 1.1e-221 773.5 547 68.0
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 1.2e-218 763.5 454 82.6
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 4.2e-216 755.0 514 72.4
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.8e-211 739.6 552 65.6
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 2.0e-210 736.1 543 68.7
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 7.7e-210 734.2 427 84.5
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 3.8e-209 731.9 536 67.0
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 8.0e-207 724.2 424 83.3
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 3.0e-206 722.2 543 65.4
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.6e-201 704.1 539 65.7
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.6e-201 704.1 539 65.7
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 7.8e-186 654.4 609 59.4
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 3.2e-155 552.7 331 80.7
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 3.2e-155 552.7 323 82.4
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 1.8e-153 547.0 554 56.1
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 3.1e-142 509.6 547 49.5
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 6.7e-137 491.9 285 82.8
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 2.0e-133 480.3 306 75.8
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 3.9e-121 439.5 335 66.9
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 8.8e-121 438.3 304 69.4
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 3.7e-95 353.2 199 84.9
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.7e-87 326.6 510 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.1e-70 271.9 336 44.3
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 3.1e-65 253.8 200 61.0
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 6.8e-57 226.1 135 82.2
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 5.1e-52 209.9 139 75.5
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 1.2e-50 205.3 124 76.6
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 2.8e-50 204.1 133 72.2
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 9.9e-48 195.7 123 74.0
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 9.9e-48 195.7 123 74.0
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.9e-46 191.4 111 78.4
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 7.8e-45 186.0 115 73.9
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 7.8e-45 186.0 115 73.9
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 7.8e-45 186.0 110 77.3
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 2.5e-43 181.0 115 73.0
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 2.5e-43 181.0 115 73.0
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.3e-43 180.6 115 75.7
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 4.3e-43 180.3 111 72.1
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 3.9e-36 157.1 96 76.0
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 2.1e-34 151.4 73 93.2
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 1.0e-28 132.5 79 78.5
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 1.0e-23 115.9 118 49.2
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.9e-22 111.7 86 61.6
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 3.5e-21 107.5 68 70.6
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 1.9e-19 101.7 189 39.7
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 3.4e-16 90.9 61 67.2
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 4.2e-14 84.0 55 72.7


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