Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 8.9e-259 896.3 432 100.0
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 8.8e-206 720.3 433 81.8
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.5e-189 666.4 432 74.5
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 7.0e-187 657.5 424 77.1
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.0e-185 653.7 433 72.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.2e-185 652.5 433 73.0
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 5.0e-185 651.4 429 73.0
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 5.0e-185 651.4 433 72.1
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.5e-184 649.8 435 73.8
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.5e-184 649.0 423 73.8
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.2e-183 646.7 434 71.7
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.4e-182 643.3 432 71.3
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.0e-178 629.4 430 70.9
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.0e-178 629.4 430 71.2
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.5e-173 613.2 485 63.3
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.7e-169 599.7 428 67.8
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 5.0e-169 598.2 434 65.2
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 5.5e-168 594.7 429 65.3
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.2e-167 593.6 494 60.9
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 2.8e-167 592.4 430 65.3
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 2.6e-165 585.9 454 62.8
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 3.4e-165 585.5 429 65.0
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 5.7e-165 584.7 434 65.0
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 2.2e-164 582.8 430 65.8
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.8e-164 582.4 445 62.2
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 3.7e-164 582.0 441 64.9
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.1e-163 580.5 445 62.0
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.4e-163 580.1 437 65.0
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 7.0e-163 577.8 430 65.8
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.6e-162 576.6 429 66.2
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 1.7e-161 573.2 434 63.1
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 8.0e-159 564.3 427 63.7
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 8.0e-159 564.3 435 64.6
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 3.4e-157 558.9 433 63.0
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 3.2e-155 552.4 435 61.8
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 9.2e-155 550.8 429 61.8
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 9.2e-155 550.8 429 61.5
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 9.2e-155 550.8 429 61.8
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 9.2e-155 550.8 429 61.8
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 2.0e-154 549.7 429 61.8
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 2.0e-154 549.7 429 61.5
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.3e-153 547.0 429 61.5
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.3e-153 547.0 429 61.5
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 5.0e-153 545.0 429 60.8
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 6.6e-153 544.7 429 61.1
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 6.6e-153 544.7 437 61.8
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.1e-152 543.9 428 60.7
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.1e-152 543.9 428 61.0
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 3.3e-152 542.3 428 60.7
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 9.5e-152 540.8 430 60.9
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.6e-151 540.0 461 58.1
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 2.8e-151 539.3 467 58.7
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 3.6e-151 538.9 446 58.7
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.4e-150 537.0 429 60.6
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 3.1e-150 535.8 436 60.6
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 8.9e-150 534.3 418 60.3
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.5e-149 533.5 430 60.7
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.0e-149 533.1 428 59.3
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.3e-148 530.4 436 59.4
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.7e-148 530.0 432 58.6
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 4.9e-148 528.5 428 59.8
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 8.3e-148 527.7 435 59.1
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 8.3e-148 527.7 377 67.9
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 7.0e-147 524.6 433 59.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.6e-146 523.5 455 57.4
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.1e-144 517.3 434 59.7
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.3e-144 515.4 430 59.5
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.8e-143 512.7 433 58.2
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 6.2e-143 511.5 428 58.6
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.8e-142 510.0 430 58.8
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.0e-142 508.8 449 55.9
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.2e-141 507.3 430 58.6
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.3e-140 501.1 431 58.5
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 3.5e-138 495.7 355 69.0
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.7e-132 476.9 431 53.8
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 6.2e-127 458.4 432 53.9
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.2e-123 446.0 434 51.8
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-122 443.0 428 53.0
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-122 443.0 428 53.0
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 4.3e-120 435.6 467 52.5
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 4.8e-119 432.2 349 59.9
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.8e-118 430.3 399 54.1
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.0e-118 429.1 354 60.2
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.9e-118 428.3 434 50.7
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 6.9e-118 428.3 339 61.1
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.6e-117 426.4 411 50.1
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.4e-115 420.6 433 47.6
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.5e-101 374.0 256 71.5
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 3.5e-98 362.8 452 41.8
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 4.3e-96 355.9 431 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 4.1e-94 349.4 420 42.9
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.5e-93 347.4 507 39.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 3.2e-91 339.7 209 76.6
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 9.1e-86 321.6 203 73.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.2e-79 300.4 388 40.7
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.2e-69 268.1 183 68.9
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.9e-67 260.8 191 64.9
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 9.1e-62 241.9 190 60.5
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.2e-56 224.9 189 53.4
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.3e-51 206.8 157 59.9
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 7.5e-48 195.7 103 88.3
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 9.2e-46 188.7 147 56.5
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-40 171.8 157 58.0
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.5e-40 171.4 157 57.3
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.5e-40 171.4 157 57.3
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 4.4e-40 169.9 145 59.3
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.7e-39 167.9 128 61.7
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.7e-39 167.9 106 73.6
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 4.1e-38 163.3 156 53.2
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.6e-34 150.2 117 61.5
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.4e-33 148.3 117 61.5
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-33 148.3 125 60.0
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.6e-32 144.1 120 55.8
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 4.9e-31 139.8 81 75.3
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 7.8e-29 132.5 92 68.5
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 1.6e-26 124.8 72 72.2
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-23 114.4 86 61.6
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.1e-22 109.4 77 55.8
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.1e-22 109.4 112 46.4
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-20 105.1 59 69.5
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-20 105.1 83 57.8
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.0e-20 104.0 72 58.3
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 5.1e-20 103.2 127 45.7
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.5e-19 101.7 56 73.2
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.4e-14 85.1 54 72.2
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.6e-13 81.6 51 70.6
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-12 78.6 68 57.4
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.3e-10 72.0 136 32.4
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.3e-10 72.0 51 60.8
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.3e-07 62.0 42 61.9
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 1.7e-07 61.6 96 38.5
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 2.2e-07 61.2 42 61.9
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 6.4e-07 59.7 96 37.5
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 1.4e-06 58.5 42 61.9
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.2e-06 57.4 37 62.2
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 5.4e-06 56.6 96 36.5


User provided reference genes

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