Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03554 Striga asiatica HOM05D002474 ORTHO05D007142 5.1e-165 584.3 292 100.0
SGA_v2.0_scaffold254G45227 Striga asiatica HOM05D002474 ORTHO05D007142 1.1e-103 380.6 247 82.2
Migut.B00704 Erythranthe guttata HOM05D002474 ORTHO05D007142 2.1e-57 226.9 254 53.1
MSTRG.16457 Avicennia marina HOM05D002474 ORTHO05D007142 3.5e-57 226.1 252 54.0
SalBow4G0251 Salvia bowleyana HOM05D002474 ORTHO05D007142 4.6e-57 225.7 254 55.9
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 7.6e-44 181.8 189 57.1
Dinv30985 Davidia involucrata HOM05D002474 ORTHO05D007142 1.9e-42 177.2 260 47.3
Actinidia11725 Actinidia chinensis HOM05D002474 ORTHO05D007142 2.8e-38 163.3 253 42.7
unitig_82.g27138 Utricularia gibba HOM05D002474 ORTHO05D007142 1.2e-36 157.9 140 62.9
Oeu000165.2 Olea europaea HOM05D002474 ORTHO05D007142 3.4e-36 156.4 117 70.9
Cc02_g23800 Coffea canephora HOM05D002474 ORTHO05D007142 1.1e-34 151.4 270 39.6
Cpa.g.sc2.182 Carica papaya HOM05D002474 ORTHO05D007142 1.4e-34 151.0 300 38.3
Hma1.2p1_0157F.1_g069220 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 5.4e-34 149.1 249 43.0
Hma1.2p1_0157F.1_g069230 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 5.4e-34 149.1 249 43.0
QL02p103729 Quercus lobata HOM05D002474 ORTHO05D007142 5.4e-34 149.1 267 39.7
Ciclev10001219m.g Citrus clementina HOM05D002474 ORTHO05D007142 7.1e-34 148.7 287 40.4
Haze_09959 Corylus avellana HOM05D002474 ORTHO05D007142 7.9e-33 145.2 267 38.6
Potri.004G230600 Populus trichocarpa HOM05D002474 ORTHO05D007142 1.3e-32 144.4 242 40.1
TWI14G0213 Tripterygium wilfordii HOM05D002474 ORTHO05D007142 1.8e-32 144.1 265 39.2
Cfa004419 Carpinus fangiana HOM05D002474 ORTHO05D007142 2.3e-32 143.7 268 38.1
CSS0041347 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D007142 3.0e-32 143.3 156 53.2
Lj5A306G48 Lonicera japonica HOM05D002474 ORTHO05D007142 3.0e-32 143.3 247 42.9
Thecc.06G063000 Theobroma cacao HOM05D002474 ORTHO05D007142 3.0e-32 143.3 154 53.2
Peaxi162Scf00071g00020 Petunia axillaris HOM05D002474 ORTHO05D007142 6.7e-32 142.1 203 45.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.1e-31 141.4 245 42.0
AUR62025683 Chenopodium quinoa HOM05D002474 ORTHO05D007142 1.9e-31 140.6 148 52.7
Prupe.5G038000 Prunus persica HOM05D002474 ORTHO05D007142 1.9e-31 140.6 247 40.1
vmacro01627 Vaccinium macrocarpon HOM05D002474 ORTHO05D007142 1.9e-31 140.6 253 40.7
Gorai.007G360100 Gossypium raimondii HOM05D002474 ORTHO05D007142 3.3e-31 139.8 133 57.9
VMungo1215G1553 Vigna mungo HOM05D002474 ORTHO05D007142 3.3e-31 139.8 108 67.6
Manes.06G014900 Manihot esculenta HOM05D002474 ORTHO05D007142 4.3e-31 139.4 263 38.4
Nitab4.5_0002158g0290 Nicotiana tabacum HOM05D002474 ORTHO05D007142 5.6e-31 139.0 170 51.2
CiPaw.05G000700 Carya illinoinensis HOM05D002474 ORTHO05D007142 9.6e-31 138.3 260 37.7
ECA246G2471 Erigeron canadensis HOM05D002474 ORTHO05D007142 9.6e-31 138.3 110 65.5
HanXRQChr12g0367101 Helianthus annuus HOM05D002474 ORTHO05D007142 9.6e-31 138.3 125 62.4
Nitab4.5_0001031g0150 Nicotiana tabacum HOM05D002474 ORTHO05D007142 9.6e-31 138.3 247 42.1
Phvul.003G090600 Phaseolus vulgaris HOM05D002474 ORTHO05D007142 9.6e-31 138.3 108 65.7
AUR62001301 Chenopodium quinoa HOM05D002474 ORTHO05D007142 1.3e-30 137.9 148 52.0
Gohir.D11G328800 Gossypium hirsutum HOM05D002474 ORTHO05D007142 2.1e-30 137.1 133 57.1
Gohir.A11G312300 Gossypium hirsutum HOM05D002474 ORTHO05D007142 3.7e-30 136.3 151 51.7
TPR.G5978 Trifolium pratense HOM05D002474 ORTHO05D007142 3.7e-30 136.3 110 64.5
CAN.G492.43 Capsicum annuum HOM05D002474 ORTHO05D007142 4.8e-30 136.0 131 57.3
Lsat_1_v5_gn_9_123041 Lactuca sativa HOM05D002474 ORTHO05D007142 4.8e-30 136.0 113 63.7
MD04G1042800 Malus domestica HOM05D002474 ORTHO05D007142 4.8e-30 136.0 250 40.0
Hund06555 Selenicereus undatus HOM05D002474 ORTHO05D007142 4.8e-30 136.0 140 53.6
EL10Ac7g18100 Beta vulgaris HOM05D002474 ORTHO05D007142 6.2e-30 135.6 171 47.4
Medtr4g134500 Medicago truncatula HOM05D002474 ORTHO05D007142 6.2e-30 135.6 110 63.6
RcHm_v2.0_Chr5g0034601 Rosa chinensis HOM05D002474 ORTHO05D007142 6.2e-30 135.6 298 36.9
Rhsim11G0114900 Rhododendron simsii HOM05D002474 ORTHO05D007142 1.4e-29 134.4 254 39.8
Aa31LG9G1650 Aethionema arabicum HOM05D002474 ORTHO05D007142 1.8e-29 134.0 161 49.1
Duzib268G0482 Durio zibethinus HOM05D002474 ORTHO05D007142 2.4e-29 133.7 124 59.7
Sabra01G0175800 Salix brachista HOM05D002474 ORTHO05D007142 2.4e-29 133.7 242 38.8
Ca_13520_v3 Cicer arietinum L. HOM05D002474 ORTHO05D007142 3.1e-29 133.3 108 64.8
ClCG10G007610 Citrullus lanatus HOM05D002474 ORTHO05D007142 3.1e-29 133.3 132 54.5
Lalb_Chr18g0047541 Lupinus albus HOM05D002474 ORTHO05D007142 3.1e-29 133.3 153 52.3
Psat0s2555g0320 Pisum sativum HOM05D002474 ORTHO05D007142 3.1e-29 133.3 107 64.5
Atru.chr6.88 Acer truncatum HOM05D002474 ORTHO05D007142 5.3e-29 132.5 241 40.2
PGR142G0374 Punica granatum HOM05D002474 ORTHO05D007142 5.3e-29 132.5 110 60.9
PGSC0003DMG400014407 Solanum tuberosum HOM05D002474 ORTHO05D007142 5.3e-29 132.5 164 48.2
MELO3C016437.2 Cucumis melo HOM05D002474 ORTHO05D007142 6.9e-29 132.1 216 40.7
FAN11G0845 Fragaria x ananassa HOM05D002474 ORTHO05D007142 6.9e-29 132.1 242 38.8
Glyma.07G271300 Glycine max HOM05D002474 ORTHO05D007142 9.0e-29 131.7 131 55.0
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 1.2e-28 131.3 119 60.5
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 1.2e-28 131.3 146 52.1
BolC4t26229H Brassica oleracea HOM05D002474 ORTHO05D007142 1.2e-28 131.3 128 54.7
Sc10g0008100 Simmondsia chinensis HOM05D002474 ORTHO05D007142 1.2e-28 131.3 181 44.8
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.5e-28 131.0 128 54.7
Sp7g02120 Schrenkiella parvula HOM05D002474 ORTHO05D007142 1.5e-28 131.0 119 57.1
AL7G50170 Arabidopsis lyrata HOM05D002474 ORTHO05D007142 2.0e-28 130.6 133 52.6
FAN16G1529 Fragaria x ananassa HOM05D002474 ORTHO05D007142 2.0e-28 130.6 248 39.1
FAN21G2400 Fragaria x ananassa HOM05D002474 ORTHO05D007142 2.0e-28 130.6 248 39.5
Sed0015094 Sechium edule HOM05D002474 ORTHO05D007142 2.0e-28 130.6 163 48.5
GSVIVG01018503001 Vitis vinifera HOM05D002474 ORTHO05D007142 2.0e-28 130.6 125 54.4
Eucgr.L00744 Eucalyptus grandis HOM05D002474 ORTHO05D007142 3.4e-28 129.8 108 63.0
Thhalv10027686m.g Eutrema salsugineum HOM05D002474 ORTHO05D007142 3.4e-28 129.8 110 60.0
BraA04t16929Z Brassica rapa HOM05D002474 ORTHO05D007142 4.5e-28 129.4 247 38.1
AT5G39960 Arabidopsis thaliana HOM05D002474 ORTHO05D007142 5.8e-28 129.0 133 52.6
CARHR262220 Cardamine hirsuta HOM05D002474 ORTHO05D007142 5.8e-28 129.0 241 38.6
Solyc10g005910.2 Solanum lycopersicum HOM05D002474 ORTHO05D007142 5.8e-28 129.0 133 56.4
CsaV3_3G006770 Cucumis sativus L. HOM05D002474 ORTHO05D007142 7.6e-28 128.6 132 53.0
Sopen10g001870 Solanum pennellii HOM05D002474 ORTHO05D007142 7.6e-28 128.6 133 56.4
Zm00001eb119500 Zea mays HOM05D002474 ORTHO05D007142 7.6e-28 128.6 117 57.3
Carub.0007s3576 Capsella rubella HOM05D002474 ORTHO05D007142 9.9e-28 128.3 119 56.3
MBI03_g28951_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D007142 1.3e-27 127.9 156 49.4
Nn6g34097 Nelumbo nucifera HOM05D002474 ORTHO05D007142 1.3e-27 127.9 108 60.2
Aqoxy6G02786 Aquilegia oxysepala HOM05D002474 ORTHO05D007142 1.7e-27 127.5 108 59.3
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.7e-27 127.5 143 53.1
SHI11364 Sapria himalayana HOM05D002474 ORTHO05D007142 1.7e-27 127.5 110 59.1
arahy.Tifrunner.gnm1.ann1.W79BEX Arachis hypogaea HOM05D002474 ORTHO05D007142 2.2e-27 127.1 109 59.6
Os01g0225200 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D007142 2.2e-27 127.1 114 57.9
PSO339G3087 Papaver somniferum HOM05D002474 ORTHO05D007142 2.2e-27 127.1 170 44.7
FAN25G2389 Fragaria x ananassa HOM05D002474 ORTHO05D007142 2.9e-27 126.7 126 54.8
arahy.Tifrunner.gnm1.ann1.1P8C08 Arachis hypogaea HOM05D002474 ORTHO05D007142 3.8e-27 126.3 132 53.0
CANSAT01G1519 Cannabis sativa HOM05D002474 ORTHO05D007142 8.4e-27 125.2 110 58.2
HPP92_023931 Vanilla planifolia HOM05D002474 ORTHO05D007142 8.4e-27 125.2 120 55.8
HPP92_023952 Vanilla planifolia HOM05D002474 ORTHO05D007142 8.4e-27 125.2 120 55.8
Lj4g0011201 Lotus japonicus HOM05D002474 ORTHO05D007142 1.4e-26 124.4 122 56.6
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.9e-26 124.0 106 59.4
ATR0041G021 Amborella trichopoda HOM05D002474 ORTHO05D007142 9.3e-26 121.7 108 57.4
Lj6g0027900 Lotus japonicus HOM05D002474 ORTHO05D007142 3.5e-25 119.8 122 53.3
SEGI_36950 Sequoiadendron giganteum HOM05D002474 ORTHO05D007142 6.0e-25 119.0 178 42.7
FvH4_3g20580 Fragaria vesca HOM05D002474 ORTHO05D007142 5.6e-23 112.5 75 72.0
MD13G1272200 Malus domestica HOM05D002474 ORTHO05D007142 5.3e-21 105.9 75 69.3
Pp3c21_12090 Physcomitrium patens HOM05D002474 ORTHO05D007142 2.6e-20 103.6 102 52.0
AagrBONN_evm.TU.Sc2ySwM_362.1260 Anthoceros agrestis HOM05D002474 ORTHO05D007142 2.5e-18 97.1 116 45.7
SMO172G0210 Selaginella moellendorffii HOM05D002474 ORTHO05D007142 6.0e-17 92.4 98 49.0
Mapoly0007s0284 Marchantia polymorpha HOM05D002474 ORTHO05D007142 7.9e-17 92.0 98 46.9
Mapoly0252s0004 Marchantia polymorpha HOM05D002474 ORTHO05D007142 7.9e-17 92.0 98 46.9
Dinv29654 Davidia involucrata HOM05D002474 ORTHO05D007142 8.7e-16 88.6 69 66.7
Cre03.g172250 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D007142 1.1e-15 88.2 116 40.5
CBR_g2956 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-07 61.2 132 28.8


User provided reference genes

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