Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 2.0e-256 888.6 465 100.0
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.4e-225 786.2 469 86.6
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 5.3e-217 757.7 469 84.4
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.5e-211 739.6 486 78.4
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 7.7e-208 727.2 470 79.8
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 7.7e-208 727.2 466 79.8
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.3e-207 726.5 470 80.9
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.7e-205 718.8 469 80.8
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.5e-203 713.0 469 78.0
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.8e-201 706.1 469 76.5
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.1e-201 705.3 470 75.1
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.0e-200 702.6 469 77.2
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.3e-199 699.9 465 76.1
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 4.7e-197 691.4 469 73.6
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.3e-196 689.1 469 76.5
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 3.0e-196 688.7 469 73.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 7.5e-195 684.1 467 76.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.3e-194 683.3 469 72.5
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.3e-194 683.3 467 76.4
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.3e-194 683.3 467 77.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.7e-194 682.9 469 75.9
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.2e-194 682.6 467 77.5
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.2e-194 682.6 469 76.8
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.4e-193 679.9 469 73.1
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.4e-193 677.9 467 77.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 9.1e-193 677.2 476 75.2
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.2e-192 676.8 469 73.1
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 2.0e-192 676.0 469 72.7
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.0e-192 676.0 470 73.0
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 2.0e-192 676.0 469 75.1
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 1.3e-191 673.3 420 79.0
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.3e-191 673.3 466 75.5
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 3.8e-191 671.8 470 73.0
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 8.6e-191 670.6 469 72.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.5e-190 669.8 470 71.5
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.5e-190 669.8 469 71.2
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 5.5e-190 667.9 470 71.9
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 9.5e-190 667.2 469 72.7
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.6e-189 666.4 470 71.7
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.1e-189 666.0 470 75.3
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 8.0e-189 664.1 469 74.0
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 5.2e-188 661.4 469 72.5
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.4e-187 658.3 469 69.7
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 4.4e-187 658.3 471 71.1
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 5.7e-187 657.9 469 69.9
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 5.7e-187 657.9 469 72.5
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 9.8e-187 657.1 427 75.6
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.3e-186 656.8 470 73.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 1.7e-186 656.4 471 72.6
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.9e-186 655.6 470 71.3
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 6.3e-186 654.4 471 71.1
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 6.3e-186 654.4 470 72.3
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 8.3e-186 654.1 469 72.7
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 8.3e-186 654.1 468 71.8
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.4e-185 653.3 515 66.6
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 1.4e-185 653.3 469 72.7
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 1.8e-185 652.9 449 73.9
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.2e-185 652.1 416 76.0
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 4.1e-185 651.7 469 72.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 5.4e-185 651.4 427 74.7
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 5.4e-185 651.4 466 70.8
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 1.2e-184 650.2 469 71.6
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.2e-184 650.2 469 70.8
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.6e-184 649.8 469 69.3
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.5e-184 648.7 469 69.7
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 4.6e-184 648.3 469 70.4
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 7.8e-184 647.5 421 74.3
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 7.8e-184 647.5 469 69.5
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.0e-183 647.1 417 75.8
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.7e-183 646.4 471 74.3
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 2.9e-183 645.6 469 70.1
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.9e-183 645.2 469 72.3
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.9e-183 645.2 470 69.4
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 6.6e-183 644.4 470 69.6
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 1.1e-182 643.7 470 69.6
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.9e-182 642.9 496 68.3
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.2e-181 640.2 420 75.7
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.7e-181 638.3 498 68.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 8.0e-181 637.5 464 69.8
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.0e-180 637.1 467 68.5
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.8e-180 636.3 470 72.3
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 3.1e-180 635.6 464 70.9
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 3.1e-180 635.6 470 71.1
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 6.8e-180 634.4 470 70.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 5.8e-179 631.3 470 70.4
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 3.7e-178 628.6 401 73.6
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 2.4e-177 625.9 434 71.9
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.5e-176 622.1 470 69.6
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 3.9e-175 618.6 470 68.1
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.9e-174 616.3 399 73.9
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.3e-174 615.5 471 68.2
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 4.3e-174 615.1 469 68.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 7.3e-174 614.4 470 66.8
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.2e-173 613.6 470 67.9
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.2e-173 613.6 470 67.9
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.2e-173 613.6 470 67.9
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.2e-173 613.6 470 68.1
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.6e-173 612.1 492 66.3
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 8.1e-173 610.9 470 67.9
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 2.3e-172 609.4 469 67.8
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 4.0e-172 608.6 470 67.2
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 1.3e-170 603.6 471 67.5
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.7e-170 603.2 455 65.9
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.9e-170 602.4 471 67.3
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 6.0e-168 594.7 465 66.2
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.2e-165 584.7 415 70.6
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 8.1e-165 584.3 454 66.7
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 4.9e-162 575.1 463 64.4
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.9e-161 573.2 399 73.2
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 2.1e-160 569.7 420 65.5
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.0e-143 514.2 318 78.6
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.1e-140 502.7 385 70.4
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 3.9e-135 485.7 399 58.1
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.0e-130 471.1 411 57.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.3e-126 456.1 402 55.5
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.3e-118 429.5 460 52.8
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.6e-104 382.9 412 52.2
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 3.1e-100 369.8 535 37.6
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 1.6e-99 367.5 287 62.4
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.0e-98 362.5 265 72.5
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.5e-75 286.6 188 72.9
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 2.0e-67 260.8 275 57.5
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.5e-57 228.0 263 54.8
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 1.9e-57 227.6 263 54.8
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.2e-53 214.2 207 58.0
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.3e-42 177.6 145 61.4
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.1e-39 168.7 146 60.3
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 5.2e-39 166.4 177 55.9
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.7e-37 161.4 127 70.1
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.5e-33 148.3 123 61.8
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.4e-30 137.1 375 27.2
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 3.4e-22 110.5 60 86.7
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.5e-17 94.4 57 82.5
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 3.4e-14 84.0 59 66.1
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 4.5e-14 83.6 96 53.1
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.1e-07 62.4 70 60.0


User provided reference genes

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