Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold78G25488 Striga asiatica HOM05D001811 ORTHO05D001738 3.4e-61 238.0 110 100.0
PGSC0003DMG400004588 Solanum tuberosum HOM05D001811 ORTHO05D001738 1.2e-10 70.1 48 68.8
Hund10620 Selenicereus undatus HOM05D001811 ORTHO05D001738 2.7e-10 68.9 37 81.1
MBI10_g44819_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 4.6e-10 68.2 37 78.4
SGA_v2.0_scaffold31G12565 Striga asiatica HOM05D001811 ORTHO05D001738 4.6e-10 68.2 37 81.1
SGA_v2.0_scaffold406G51047 Striga asiatica HOM05D001811 ORTHO05D001738 4.6e-10 68.2 37 81.1
DCAR_005540 Daucus carota HOM05D001811 ORTHO05D001738 7.8e-10 67.4 37 78.4
Lj6C64T9 Lonicera japonica HOM05D001811 ORTHO05D001738 7.8e-10 67.4 37 78.4
Nitab4.5_0000978g0110 Nicotiana tabacum HOM05D001811 ORTHO05D001738 7.8e-10 67.4 39 76.9
Hma1.2p1_1187F.1_g265150 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 1.7e-09 66.2 37 75.7
Hma1.2p1_2198F.1_g316920 Hydrangea macrophylla HOM05D001811 ORTHO05D001738 1.7e-09 66.2 37 75.7
Aqoxy2G04086 Aquilegia oxysepala HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 75.7
CSS0012265 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
CSS0046200 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
CAN.G484.125 Capsicum annuum HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Dinv22672 Davidia involucrata HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 75.7
Migut.N00465 Erythranthe guttata HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Nn1g09742 Nelumbo nucifera HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 75.7
Nitab4.5_0002466g0030 Nicotiana tabacum HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Oeu061586.1 Olea europaea HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Peaxi162Scf00378g00825 Petunia axillaris HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Prupe.1G182600 Prunus persica HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Solyc12g098740.2 Solanum lycopersicum HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
Sopen12g033490 Solanum pennellii HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 78.4
TAR633G1013 Trochodendron aralioides HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 75.7
GSVIVG01013540001 Vitis vinifera HOM05D001811 ORTHO05D001738 2.3e-09 65.9 37 75.7
Atru.chr3.1643 Acer truncatum HOM05D001811 ORTHO05D001738 3.9e-09 65.1 37 75.7
Oeu034283.1 Olea europaea HOM05D001811 ORTHO05D001738 3.9e-09 65.1 37 73.0
Potri.014G151300 Populus trichocarpa HOM05D001811 ORTHO05D001738 3.9e-09 65.1 37 75.7
ATR0048G039 Amborella trichopoda HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
CiPaw.02G057100 Carya illinoinensis HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
Cc03_g11140 Coffea canephora HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
FAN07G1164 Fragaria x ananassa HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
FAN17G1507 Fragaria x ananassa HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
FAN22G1882 Fragaria x ananassa HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
Nitab4.5_0001049g0150 Nicotiana tabacum HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
Nitab4.5_0002908g0030 Nicotiana tabacum HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
PGR083G0330 Punica granatum HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
RcHm_v2.0_Chr4g0408771 Rosa chinensis HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
Sc05g0006530 Simmondsia chinensis HOM05D001811 ORTHO05D001738 5.1e-09 64.7 37 75.7
MSTRG.24589 Avicennia marina HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
EL10Ac5g11553 Beta vulgaris HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 70.3
ClCG07G016600 Citrullus lanatus HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 73.0
COL.COLO4_24360 Corchorus olitorius HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
MELO3C017683.2 Cucumis melo HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 73.0
CsaV3_4G003710 Cucumis sativus L. HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 73.0
MD00G1184300 Malus domestica HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
SalBow6G5173 Salvia bowleyana HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
THA.LOC104802295 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
THA.LOC104803545 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 6.6e-09 64.3 37 75.7
CSS0009333 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
CSS0032314 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
AUR62004736 Chenopodium quinoa HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
Duzib151G0244 Durio zibethinus HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
Gohir.A02G013600 Gossypium hirsutum HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
Gohir.D02G014700 Gossypium hirsutum HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
Gorai.005G018100 Gossypium raimondii HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
Lsat_1_v5_gn_6_56560 Lactuca sativa HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 73.0
Potri.002G231100 Populus trichocarpa HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 73.0
Thecc.04G182300 Theobroma cacao HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 75.7
TWI63G0726 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 8.7e-09 63.9 37 73.0
Actinidia17217 Actinidia chinensis HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 75.7
CANSAT78G0485 Cannabis sativa HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 75.7
AUR62037519 Chenopodium quinoa HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 75.7
DCAR_023909 Daucus carota HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
FvH4_4g11622 Fragaria vesca HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
FAN12G2629 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
FAN12G3472 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
PSO017G3182 Papaver somniferum HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
PSO675G8843 Papaver somniferum HOM05D001811 ORTHO05D001738 1.1e-08 63.5 37 73.0
BcaB01g03407 Brassica carinata HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
BcaC01g05253 Brassica carinata HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
C03p28670 Brassica napus HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
BolC3t15229H Brassica oleracea HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
CDE04G1857 Ceratophyllum demersum HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
Duzib268G1190 Durio zibethinus HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
Eucgr.H00432 Eucalyptus grandis HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
MD04G1031100 Malus domestica HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
Oeu050361.1 Olea europaea HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
THA.LOC104825689 Tarenaya hassleriana HOM05D001811 ORTHO05D001738 1.5e-08 63.2 37 73.0
A04p32480 Brassica napus HOM05D001811 ORTHO05D001738 1.9e-08 62.8 37 70.3
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.9e-08 62.8 37 70.3
AUR62042832 Chenopodium quinoa HOM05D001811 ORTHO05D001738 1.9e-08 62.8 37 73.0
ECA233G2810 Erigeron canadensis HOM05D001811 ORTHO05D001738 1.9e-08 62.8 37 64.9
QL10p046375 Quercus lobata HOM05D001811 ORTHO05D001738 1.9e-08 62.8 37 73.0
Aa31LG1G24970 Aethionema arabicum HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
A05p03660 Brassica napus HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
C04p04260 Brassica napus HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
BolC4t22062H Brassica oleracea HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
BraA05t19351Z Brassica rapa HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
Carub.0004s2564 Capsella rubella HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
CARHR138230 Cardamine hirsuta HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
Gohir.D10G131300 Gossypium hirsutum HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 73.0
Gorai.011G144900 Gossypium raimondii HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 73.0
Pp3c10_21630 Physcomitrium patens HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 70.3
unitig_22.g5715 Utricularia gibba HOM05D001811 ORTHO05D001738 2.5e-08 62.4 37 73.0
AL4G41830 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
A03p24080 Brassica napus HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
BraA03t11618Z Brassica rapa HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
Ca_25794_v3 Cicer arietinum L. HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 75.7
ClCG08G004100 Citrullus lanatus HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
CsaV3_6G003220 Cucumis sativus L. HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
Glyma.08G362400 Glycine max HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 75.7
Glyma.18G299500 Glycine max HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 75.7
Phvul.008G003100 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 75.7
Sed0014185 Sechium edule HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
HPP92_025359 Vanilla planifolia HOM05D001811 ORTHO05D001738 3.3e-08 62.0 37 70.3
AT2G43160 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 70.3
arahy.Tifrunner.gnm1.ann1.UP2C0E Arachis hypogaea HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 73.0
Ciclev10018676m.g Citrus clementina HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 70.3
Thhalv10001304m.g Eutrema salsugineum HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 70.3
Lalb_Chr21g0307671 Lupinus albus HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 73.0
Manes.04G050100 Manihot esculenta HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 67.6
Sp4g25290 Schrenkiella parvula HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 70.3
Sc17g0005150 Simmondsia chinensis HOM05D001811 ORTHO05D001738 4.3e-08 61.6 37 70.3
arahy.Tifrunner.gnm1.ann1.VBT4RZ Arachis hypogaea HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 73.0
HanXRQChr02g0057571 Helianthus annuus HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 70.3
Rhsim09G0034800 Rhododendron simsii HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 70.3
Hund15233 Selenicereus undatus HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 70.3
vmacro00575 Vaccinium macrocarpon HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 70.3
Zm00001eb191930 Zea mays HOM05D001811 ORTHO05D001738 5.6e-08 61.2 37 67.6
Actinidia35897 Actinidia chinensis HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 70.3
arahy.Tifrunner.gnm1.ann1.EJ828S Arachis hypogaea HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
arahy.Tifrunner.gnm1.ann1.ET71BL Arachis hypogaea HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
HanXRQChr11g0344591 Helianthus annuus HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
Medtr7g006280 Medicago truncatula HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
Os02g0806600 Oryza sativa ssp. japonica HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 64.9
Psat3g207280 Pisum sativum HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
Sp5g03810 Schrenkiella parvula HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 70.3
VMungo1383G1407 Vigna mungo HOM05D001811 ORTHO05D001738 7.3e-08 60.8 37 73.0
CDE03G0302 Ceratophyllum demersum HOM05D001811 ORTHO05D001738 9.6e-08 60.5 37 70.3
PGSC0003DMG402021616 Solanum tuberosum HOM05D001811 ORTHO05D001738 9.6e-08 60.5 37 70.3
AT3G59290 Arabidopsis thaliana HOM05D001811 ORTHO05D001738 1.3e-07 60.1 84 40.5
CiPaw.01G105300 Carya illinoinensis HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 70.3
MBI07_g30974_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 67.6
Mapoly0035s0061 Marchantia polymorpha HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 64.9
Sabra02G0176300 Salix brachista HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 70.3
Sabra14G0115100 Salix brachista HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 70.3
SMO364G0285 Selaginella moellendorffii HOM05D001811 ORTHO05D001738 1.3e-07 60.1 37 64.9
C04p70180 Brassica napus HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 67.6
BolC4t28522H Brassica oleracea HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 67.6
CBR_g19292 Chara braunii HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 64.9
HanXRQChr17g0555611 Helianthus annuus HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 70.3
Lj1g0011997 Lotus japonicus HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 73.0
Lalb_Chr04g0257281 Lupinus albus HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 70.3
Lalb_Chr10g0091091 Lupinus albus HOM05D001811 ORTHO05D001738 1.6e-07 59.7 37 70.3
HPP92_008613 Vanilla planifolia HOM05D001811 ORTHO05D001738 1.6e-07 59.7 36 66.7
ECA248G3492 Erigeron canadensis HOM05D001811 ORTHO05D001738 2.1e-07 59.3 37 70.3
SMO364G0939 Selaginella moellendorffii HOM05D001811 ORTHO05D001738 2.1e-07 59.3 37 62.2
unitig_8.g3628 Utricularia gibba HOM05D001811 ORTHO05D001738 2.1e-07 59.3 37 67.6
Aa31LG10G13650 Aethionema arabicum HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 64.9
AL5G41170 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 67.6
Carub.0005s2603 Capsella rubella HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 67.6
Thhalv10005771m.g Eutrema salsugineum HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 67.6
Glyma.20G247700 Glycine max HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 67.6
Phvul.007G002500 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 64.9
Pp3c20_21860 Physcomitrium patens HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 62.2
Sed0009178 Sechium edule HOM05D001811 ORTHO05D001738 2.8e-07 58.9 37 64.9
TPR.G15632 Trifolium pratense HOM05D001811 ORTHO05D001738 3.6e-07 58.5 37 70.3
TWI15G0097 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 3.6e-07 58.5 37 64.9
TWI15G0854 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 3.6e-07 58.5 37 64.9
Sed0006490 Sechium edule HOM05D001811 ORTHO05D001738 4.8e-07 58.2 37 67.6
CBR_g72434 Chara braunii HOM05D001811 ORTHO05D001738 6.2e-07 57.8 37 59.5
CARHR169670 Cardamine hirsuta HOM05D001811 ORTHO05D001738 8.1e-07 57.4 37 64.9
Lalb_Chr17g0335661 Lupinus albus HOM05D001811 ORTHO05D001738 8.1e-07 57.4 37 67.6
VMungo0720G0407 Vigna mungo HOM05D001811 ORTHO05D001738 1.4e-06 56.6 37 67.6
Glyma.10G296900 Glycine max HOM05D001811 ORTHO05D001738 1.8e-06 56.2 37 67.6
PGR142G3978 Punica granatum HOM05D001811 ORTHO05D001738 1.8e-06 56.2 37 64.9
PSO541G0203 Papaver somniferum HOM05D001811 ORTHO05D001738 2.4e-06 55.8 35 62.9
BraA10t44663Z Brassica rapa HOM05D001811 ORTHO05D001738 5.3e-06 54.7 37 59.5
Lj5g0003089 Lotus japonicus HOM05D001811 ORTHO05D001738 5.3e-06 54.7 37 64.9
Pp3c6_20830 Physcomitrium patens HOM05D001811 ORTHO05D001738 5.3e-06 54.7 37 59.5
SEGI_40130 Sequoiadendron giganteum HOM05D001811 ORTHO05D001738 5.3e-06 54.7 37 59.5
Solyc09g098490.4 Solanum lycopersicum HOM05D001811 ORTHO05D001738 5.3e-06 54.7 37 59.5
Sopen09g036410 Solanum pennellii HOM05D001811 ORTHO05D001738 6.9e-06 54.3 37 59.5
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 9.0e-06 53.9 46 54.3
MBI01_g10308_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 9.0e-06 53.9 37 62.2
MBI02_g35322_MAGBIO Magnolia biondii HOM05D001811 ORTHO05D001738 9.0e-06 53.9 37 59.5
Nn6g35375 Nelumbo nucifera HOM05D001811 ORTHO05D001738 9.0e-06 53.9 37 59.5


User provided reference genes

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