Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 7.6e-56 220.3 116 100.0
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 3.3e-35 151.8 103 71.8
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 7.0e-33 144.1 103 69.9
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 9.1e-33 143.7 101 71.3
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 7.7e-32 140.6 103 68.9
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.0e-31 140.2 102 70.6
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.3e-31 139.8 104 68.3
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 5.0e-31 137.9 102 69.6
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.5e-30 136.3 102 70.6
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.5e-30 135.6 103 68.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 2.5e-30 135.6 103 66.0
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 3.2e-30 135.2 94 72.3
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 5.5e-30 134.4 94 72.3
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 5.5e-30 134.4 96 69.8
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 5.5e-30 134.4 96 70.8
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 7.2e-30 134.0 94 72.3
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 7.2e-30 134.0 103 67.0
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 7.2e-30 134.0 96 67.7
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 9.4e-30 133.7 103 66.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 9.4e-30 133.7 103 67.0
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 9.4e-30 133.7 103 66.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 2.1e-29 132.5 96 66.7
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 2.1e-29 132.5 96 65.6
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 2.1e-29 132.5 96 66.7
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 2.7e-29 132.1 96 65.6
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 3.6e-29 131.7 103 67.0
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 4.7e-29 131.3 96 65.6
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 4.7e-29 131.3 96 67.7
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 6.1e-29 131.0 103 62.1
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 6.1e-29 131.0 96 66.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.0e-28 130.2 96 68.8
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.0e-28 130.2 96 68.8
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.0e-28 130.2 94 69.1
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.0e-28 130.2 97 63.9
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.4e-28 129.8 96 65.6
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.4e-28 129.8 103 60.2
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 1.8e-28 129.4 92 68.5
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.8e-28 129.4 94 69.1
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.8e-28 129.4 95 66.3
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.8e-28 129.4 95 66.3
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.8e-28 129.4 94 69.1
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 2.3e-28 129.0 103 65.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.0e-28 128.6 95 67.4
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 3.9e-28 128.3 92 66.3
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 3.9e-28 128.3 92 66.3
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 3.9e-28 128.3 92 66.3
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 3.9e-28 128.3 97 66.0
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.9e-28 128.3 92 69.6
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 5.2e-28 127.9 96 66.7
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 5.2e-28 127.9 94 69.1
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 6.7e-28 127.5 97 63.9
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 8.8e-28 127.1 96 62.5
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.1e-27 126.7 96 63.5
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.5e-27 126.3 96 63.5
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.5e-27 126.3 96 64.6
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.0e-27 125.9 95 68.4
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 2.0e-27 125.9 95 68.4
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.6e-27 125.6 102 63.7
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 2.6e-27 125.6 92 68.5
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 3.3e-27 125.2 96 62.5
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.4e-27 124.8 97 62.9
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 4.4e-27 124.8 103 62.1
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 5.7e-27 124.4 94 67.0
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 5.7e-27 124.4 97 62.9
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 7.4e-27 124.0 96 62.5
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 9.7e-27 123.6 96 62.5
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 2.2e-26 122.5 103 61.2
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 2.2e-26 122.5 103 60.2
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.8e-26 122.1 95 66.3
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 3.7e-26 121.7 109 54.1
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 4.8e-26 121.3 94 66.0
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.4e-25 119.8 92 66.3
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.4e-25 119.8 92 66.3
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 1.8e-25 119.4 103 58.3
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.8e-25 119.4 92 67.4
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 3.1e-25 118.6 92 63.0
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.2e-24 116.7 92 64.1
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.2e-24 116.7 95 63.2
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.2e-24 116.7 95 61.1
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.6e-24 116.3 103 59.2
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.6e-24 116.3 109 52.3
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 2.0e-24 115.9 92 58.7
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 2.6e-24 115.5 92 55.4
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 3.5e-24 115.2 101 58.4
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.5e-24 115.2 92 62.0
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 4.5e-24 114.8 92 62.0
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 7.7e-24 114.0 103 57.3
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 7.7e-24 114.0 95 58.9
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 7.7e-24 114.0 95 62.1
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.3e-23 113.2 91 61.5
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 1.7e-23 112.8 96 59.4
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 6.5e-23 110.9 92 59.8
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.5e-22 109.8 87 62.1
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.9e-22 109.4 92 59.8
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.2e-22 108.2 77 70.1
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.2e-22 108.2 77 70.1
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 7.2e-22 107.5 100 56.0
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 7.2e-22 107.5 96 56.2
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.6e-21 106.3 92 57.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.6e-21 105.1 99 52.5
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 6.1e-21 104.4 97 50.5
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 8.0e-21 104.0 96 55.2
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.8e-20 102.8 90 61.1
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 8.8e-20 100.5 99 50.5
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.2e-19 100.1 92 52.2
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 2.0e-19 99.4 94 54.3
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 4.4e-19 98.2 69 66.7
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 5.7e-19 97.8 92 52.2
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.3e-18 96.7 70 70.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.7e-18 95.1 74 64.9
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.4e-17 93.2 70 64.3
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 1.8e-17 92.8 70 62.9
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 4.1e-17 91.7 94 48.9
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.0e-15 87.0 94 44.7
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.1e-14 83.6 101 51.5
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.6e-13 79.7 97 41.2
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 4.4e-11 71.6 56 58.9
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 7.5e-11 70.9 78 42.3


User provided reference genes

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