Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 3.2e-215 751.5 393 100.0
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.2e-150 537.0 420 72.6
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 5.4e-146 521.5 419 69.2
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.5e-127 460.3 408 63.5
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.4e-125 453.0 394 64.7
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.2e-124 450.7 273 84.6
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.5e-124 450.3 273 84.6
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.6e-124 449.5 403 64.8
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 7.6e-124 448.0 307 76.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.0e-123 447.6 392 66.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.3e-123 447.2 273 84.2
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.9e-123 446.0 311 75.6
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 3.8e-123 445.7 295 79.3
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.4e-122 443.7 341 70.1
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.4e-122 443.7 369 66.4
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 2.5e-122 443.0 393 65.1
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 7.1e-122 441.4 346 70.8
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 2.1e-121 439.9 397 63.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.5e-121 439.1 274 82.5
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.5e-121 439.1 279 81.0
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.0e-120 437.6 285 80.0
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.8e-120 436.8 361 67.0
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 3.0e-120 436.0 274 82.5
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 3.0e-120 436.0 341 68.9
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.1e-120 435.3 259 84.2
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 5.1e-120 435.3 339 69.6
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 6.7e-120 434.9 274 82.5
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 8.7e-120 434.5 274 82.5
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.1e-119 434.1 319 74.3
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.9e-119 433.3 394 64.2
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.9e-119 433.3 395 63.0
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.3e-119 432.6 348 67.0
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 3.3e-119 432.6 369 65.6
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 4.3e-119 432.2 271 83.8
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.6e-118 430.3 289 77.5
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 2.1e-118 429.9 285 79.3
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 4.8e-118 428.7 347 68.0
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.1e-117 427.6 268 80.6
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.4e-117 427.2 351 67.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.8e-117 426.8 326 70.9
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 2.4e-117 426.4 421 59.1
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 6.9e-117 424.9 271 80.1
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.2e-116 424.1 333 69.7
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.2e-116 424.1 333 69.7
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.2e-116 424.1 260 83.8
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.2e-116 424.1 260 83.8
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.5e-116 423.7 269 80.7
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.0e-116 423.3 395 60.5
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.0e-116 423.3 260 83.1
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.6e-116 422.9 276 78.6
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.4e-116 422.5 309 72.5
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 5.9e-116 421.8 269 79.9
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 7.6e-116 421.4 263 81.4
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 7.6e-116 421.4 401 61.8
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.6e-116 421.4 260 83.1
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.6e-116 421.4 260 83.1
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-115 421.0 399 62.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.0e-115 421.0 257 83.3
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 3.2e-114 416.0 380 62.6
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 4.2e-114 415.6 401 61.6
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 4.2e-114 415.6 279 77.1
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 5.5e-114 415.2 269 78.4
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 5.5e-114 415.2 279 76.3
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.6e-113 413.7 290 73.4
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.1e-113 413.3 380 62.1
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 2.1e-113 413.3 272 77.6
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 6.1e-113 411.8 272 77.2
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 6.1e-113 411.8 288 74.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 7.9e-113 411.4 278 77.3
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.3e-112 410.6 351 66.4
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.8e-112 410.2 356 64.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 3.0e-112 409.5 279 76.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 3.9e-112 409.1 324 69.1
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 1.9e-111 406.8 271 77.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 4.3e-111 405.6 395 62.5
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.3e-110 404.1 294 72.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.6e-110 403.7 297 71.4
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 4.8e-110 402.1 271 76.4
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 4.8e-110 402.1 287 72.5
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 6.3e-110 401.7 236 87.7
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 8.2e-110 401.4 394 59.1
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 2.4e-109 399.8 247 82.2
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 3.1e-109 399.4 268 77.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.9e-107 392.9 352 61.1
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 2.7e-105 386.3 272 72.8
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 3.6e-105 386.0 300 69.0
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 9.7e-103 377.9 286 68.9
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.3e-102 377.5 377 59.4
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.8e-101 373.6 286 69.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.1e-101 372.9 343 62.1
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.2e-100 370.9 444 52.0
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 2.2e-99 366.7 273 69.6
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.2e-97 360.9 410 52.2
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 7.9e-97 358.2 415 51.1
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 4.4e-95 352.4 287 67.6
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 4.4e-95 352.4 374 58.3
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 4.8e-94 349.0 243 74.1
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 4.8e-94 349.0 268 69.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 2.6e-92 343.2 287 62.7
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-90 336.7 209 81.3
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.6e-89 334.0 222 77.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.8e-88 330.5 328 59.8
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.8e-88 330.5 286 66.4
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 2.7e-81 306.6 309 60.5
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.1e-77 294.7 314 55.4
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 6.5e-75 285.4 178 81.5
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 8.6e-75 285.0 436 47.7
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.5e-74 284.3 286 53.5
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 4.2e-74 282.7 279 59.9
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.6e-73 280.8 263 56.3
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 2.4e-69 266.9 187 73.3
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.1e-66 258.1 287 50.9
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 4.7e-65 252.7 297 50.2
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 2.0e-63 247.3 157 79.0
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.4e-61 239.2 283 48.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.2e-60 238.0 162 72.8
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 8.9e-56 221.9 129 86.0
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.2e-55 221.5 265 52.1
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 6.6e-51 205.7 136 75.7
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.1e-50 204.9 130 79.2
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 8.9e-48 195.3 115 88.7
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.6e-42 176.0 108 79.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.2e-37 158.7 252 36.5
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.2e-30 137.5 176 44.9
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-26 123.6 187 38.5
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 8.1e-25 119.0 82 79.3
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.1e-24 118.6 90 68.9
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 9.3e-13 79.0 67 67.2
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 1.8e-11 74.7 38 97.4
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 1.1e-08 65.5 271 24.4
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.8e-08 64.7 110 38.2
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.8e-08 64.7 36 86.1


User provided reference genes

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