Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24586 Striga asiatica HOM05D004343 ORTHO05D005695 4.6e-258 894.0 454 100.0
SalBow8G4047 Salvia bowleyana HOM05D004343 ORTHO05D005695 7.7e-27 125.9 81 81.5
Migut.M00070 Erythranthe guttata HOM05D004343 ORTHO05D005695 5.5e-25 119.8 81 79.0
MSTRG.6617 Avicennia marina HOM05D004343 ORTHO05D005695 7.2e-25 119.4 81 77.8
Thecc.02G252600 Theobroma cacao HOM05D004343 ORTHO05D005695 7.2e-25 119.4 81 75.3
CsaV3_2G024650 Cucumis sativus L. HOM05D004343 ORTHO05D005695 3.6e-24 117.1 81 72.8
Gohir.A01G161800 Gossypium hirsutum HOM05D004343 ORTHO05D005695 3.6e-24 117.1 81 74.1
Gohir.D01G149200 Gossypium hirsutum HOM05D004343 ORTHO05D005695 3.6e-24 117.1 81 74.1
Gorai.002G185300 Gossypium raimondii HOM05D004343 ORTHO05D005695 3.6e-24 117.1 81 74.1
Hma1.2p1_0160F.1_g070980 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 3.6e-24 117.1 135 54.1
PSO675G7676 Papaver somniferum HOM05D004343 ORTHO05D005695 3.6e-24 117.1 81 72.8
Eucgr.H02571 Eucalyptus grandis HOM05D004343 ORTHO05D005695 4.7e-24 116.7 80 75.0
TPR.G21086 Trifolium pratense HOM05D004343 ORTHO05D005695 4.7e-24 116.7 99 63.6
Actinidia15052 Actinidia chinensis HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 72.8
Aqoxy3G02910 Aquilegia oxysepala HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 72.8
Cc11_g15270 Coffea canephora HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 74.1
Glyma.04G094500 Glycine max HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 74.1
Glyma.06G096300 Glycine max HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 74.1
Lalb_Chr05g0216791 Lupinus albus HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 74.1
Nn2g14843 Nelumbo nucifera HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 72.8
Prupe.1G251400 Prunus persica HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 74.1
PGR119G1808 Punica granatum HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 72.8
Hund25360 Selenicereus undatus HOM05D004343 ORTHO05D005695 6.1e-24 116.3 81 72.8
CSS0036353 Camellia sinensis var. sinensis HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 72.8
ClCG08G018000 Citrullus lanatus HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 72.8
Lalb_Chr09g0326321 Lupinus albus HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 74.1
MD13G1093900 Malus domestica HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 74.1
Rhsim12G0115800 Rhododendron simsii HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 72.8
GSVIVG01013767001 Vitis vinifera HOM05D004343 ORTHO05D005695 7.9e-24 115.9 81 74.1
EL10Ac6g13693 Beta vulgaris HOM05D004343 ORTHO05D005695 1.0e-23 115.5 121 53.7
Cpa.g.sc69.63 Carica papaya HOM05D004343 ORTHO05D005695 1.0e-23 115.5 81 72.8
Dinv15280 Davidia involucrata HOM05D004343 ORTHO05D005695 1.0e-23 115.5 81 74.1
Hma1.2p1_0536F.1_g173910 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 1.0e-23 115.5 81 72.8
CiPaw.06G071000 Carya illinoinensis HOM05D004343 ORTHO05D005695 1.4e-23 115.2 81 72.8
Medtr5g034120 Medicago truncatula HOM05D004343 ORTHO05D005695 1.4e-23 115.2 81 72.8
Psat2g104920 Pisum sativum HOM05D004343 ORTHO05D005695 1.4e-23 115.2 81 72.8
Sed0015591 Sechium edule HOM05D004343 ORTHO05D005695 1.4e-23 115.2 81 72.8
TWI36G0660 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 1.4e-23 115.2 81 72.8
Lj2g0023088 Lotus japonicus HOM05D004343 ORTHO05D005695 1.8e-23 114.8 81 72.8
MD16G1095200 Malus domestica HOM05D004343 ORTHO05D005695 1.8e-23 114.8 81 72.8
QL03p059677 Quercus lobata HOM05D004343 ORTHO05D005695 1.8e-23 114.8 81 74.1
THA.LOC104809607 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 1.8e-23 114.8 81 71.6
ECA246G3761 Erigeron canadensis HOM05D004343 ORTHO05D005695 2.3e-23 114.4 81 71.6
HanXRQChr14g0446801 Helianthus annuus HOM05D004343 ORTHO05D005695 2.3e-23 114.4 81 71.6
Lsat_1_v5_gn_4_161060 Lactuca sativa HOM05D004343 ORTHO05D005695 2.3e-23 114.4 81 71.6
Lj6A807T88 Lonicera japonica HOM05D004343 ORTHO05D005695 2.3e-23 114.4 81 71.6
BcaC06g31812 Brassica carinata HOM05D004343 ORTHO05D005695 3.0e-23 114.0 88 65.9
FvH4_4g34140 Fragaria vesca HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
FAN07G1173 Fragaria x ananassa HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
FAN12G0317 Fragaria x ananassa HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
FAN17G1932 Fragaria x ananassa HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
FAN22G1014 Fragaria x ananassa HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
Oeu054064.1 Olea europaea HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 75.3
RcHm_v2.0_Chr4g0443651 Rosa chinensis HOM05D004343 ORTHO05D005695 3.0e-23 114.0 81 71.6
TAR371G0394 Trochodendron aralioides HOM05D004343 ORTHO05D005695 3.0e-23 114.0 79 73.4
Cfa009167 Carpinus fangiana HOM05D004343 ORTHO05D005695 3.9e-23 113.6 81 71.6
Eucgr.B01668 Eucalyptus grandis HOM05D004343 ORTHO05D005695 3.9e-23 113.6 77 75.3
Manes.12G027200 Manihot esculenta HOM05D004343 ORTHO05D005695 3.9e-23 113.6 80 72.5
CDE05G0167 Ceratophyllum demersum HOM05D004343 ORTHO05D005695 5.1e-23 113.2 81 71.6
Ca_03146_v3 Cicer arietinum L. HOM05D004343 ORTHO05D005695 5.1e-23 113.2 81 71.6
HanXRQChr17g0539451 Helianthus annuus HOM05D004343 ORTHO05D005695 5.1e-23 113.2 81 70.4
BcaB07g31219 Brassica carinata HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
BcaC04g22231 Brassica carinata HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
A09p17490 Brassica napus HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
C09p21800 Brassica napus HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
BolC9t55085H Brassica oleracea HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
BraA09t37375Z Brassica rapa HOM05D004343 ORTHO05D005695 6.7e-23 112.8 81 70.4
Eucgr.B01666 Eucalyptus grandis HOM05D004343 ORTHO05D005695 6.7e-23 112.8 221 37.1
Atru.chr13.1904 Acer truncatum HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
arahy.Tifrunner.gnm1.ann1.NH5LZK Arachis hypogaea HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
arahy.Tifrunner.gnm1.ann1.V3QVP0 Arachis hypogaea HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
Ciclev10030717m.g Citrus clementina HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
Dinv24834 Davidia involucrata HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
Phvul.002G070100 Phaseolus vulgaris HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
VMungo1215G0144 Vigna mungo HOM05D004343 ORTHO05D005695 8.8e-23 112.5 81 72.8
Sabra12G0053500 Salix brachista HOM05D004343 ORTHO05D005695 1.1e-22 112.1 79 74.7
TAR622G0032 Trochodendron aralioides HOM05D004343 ORTHO05D005695 1.1e-22 112.1 75 77.3
Potri.012G075100 Populus trichocarpa HOM05D004343 ORTHO05D005695 1.5e-22 111.7 80 72.5
Sabra15G0094700 Salix brachista HOM05D004343 ORTHO05D005695 1.5e-22 111.7 81 71.6
CANSAT01G0446 Cannabis sativa HOM05D004343 ORTHO05D005695 2.0e-22 111.3 81 71.6
CAN.G1905.4 Capsicum annuum HOM05D004343 ORTHO05D005695 2.0e-22 111.3 81 70.4
AUR62005396 Chenopodium quinoa HOM05D004343 ORTHO05D005695 2.0e-22 111.3 79 70.9
Thhalv10023282m.g Eutrema salsugineum HOM05D004343 ORTHO05D005695 2.0e-22 111.3 81 69.1
Sp2g04240 Schrenkiella parvula HOM05D004343 ORTHO05D005695 2.0e-22 111.3 84 67.9
Sc04g0009240 Simmondsia chinensis HOM05D004343 ORTHO05D005695 2.0e-22 111.3 81 70.4
DCAR_018086 Daucus carota HOM05D004343 ORTHO05D005695 2.6e-22 110.9 81 69.1
AL2G16200 Arabidopsis lyrata HOM05D004343 ORTHO05D005695 3.3e-22 110.5 81 69.1
AT1G60490 Arabidopsis thaliana HOM05D004343 ORTHO05D005695 3.3e-22 110.5 81 69.1
ATR0624G072 Amborella trichopoda HOM05D004343 ORTHO05D005695 4.4e-22 110.2 81 67.9
Carub.0002s0485 Capsella rubella HOM05D004343 ORTHO05D005695 4.4e-22 110.2 81 69.1
AUR62014058 Chenopodium quinoa HOM05D004343 ORTHO05D005695 4.4e-22 110.2 81 67.9
TWI75G1525 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 4.4e-22 110.2 81 71.6
Aa31LG2G9960 Aethionema arabicum HOM05D004343 ORTHO05D005695 5.7e-22 109.8 81 67.9
Solyc04g015350.3 Solanum lycopersicum HOM05D004343 ORTHO05D005695 9.7e-22 109.0 81 69.1
Sopen04g007420 Solanum pennellii HOM05D004343 ORTHO05D005695 9.7e-22 109.0 81 69.1
THA.LOC104823649 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 9.7e-22 109.0 81 70.4
HPP92_021387 Vanilla planifolia HOM05D004343 ORTHO05D005695 9.7e-22 109.0 79 70.9
CARHR052540 Cardamine hirsuta HOM05D004343 ORTHO05D005695 2.2e-21 107.8 81 66.7
SHI17520 Sapria himalayana HOM05D004343 ORTHO05D005695 2.2e-21 107.8 122 50.8
Mapoly0003s0185 Marchantia polymorpha HOM05D004343 ORTHO05D005695 3.1e-20 104.0 130 50.0
Pp3c10_8910 Physcomitrium patens HOM05D004343 ORTHO05D005695 5.9e-19 99.8 81 60.5
BcaC02g10625 Brassica carinata HOM05D004343 ORTHO05D005695 1.0e-18 99.0 80 63.8
C04p25930 Brassica napus HOM05D004343 ORTHO05D005695 1.3e-18 98.6 81 63.0
Ah.03g132780 Amaranthus hybridus HOM05D004343 ORTHO05D005695 2.2e-18 97.8 105 53.3
AagrBONN_evm.TU.Sc2ySwM_228.633 Anthoceros agrestis HOM05D004343 ORTHO05D005695 2.9e-18 97.4 81 61.7
Haze_12200 Corylus avellana HOM05D004343 ORTHO05D005695 8.5e-18 95.9 118 48.3
SMO134G0165 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 1.4e-17 95.1 76 65.8
MBI16_g27084_MAGBIO Magnolia biondii HOM05D004343 ORTHO05D005695 4.2e-17 93.6 121 49.6
C05p51030 Brassica napus HOM05D004343 ORTHO05D005695 7.2e-17 92.8 84 63.1
Os05g0180600 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 9.4e-17 92.4 77 61.0
Zm00001eb178330 Zea mays HOM05D004343 ORTHO05D005695 1.2e-16 92.0 75 62.7
CBR_g5616 Chara braunii HOM05D004343 ORTHO05D005695 2.1e-16 91.3 77 61.0
vmacro16235 Vaccinium macrocarpon HOM05D004343 ORTHO05D005695 2.1e-16 91.3 112 49.1
Nitab4.5_0000147g0050 Nicotiana tabacum HOM05D004343 ORTHO05D005695 3.6e-16 90.5 120 52.5
Nitab4.5_0001663g0240 Nicotiana tabacum HOM05D004343 ORTHO05D005695 3.6e-16 90.5 120 52.5
Os08g0307400 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 8.0e-16 89.4 84 58.3
SMO228G0017 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 1.3e-13 82.0 76 55.3
SGA_v2.0_scaffold181G39704 Striga asiatica HOM05D004343 ORTHO05D005695 2.8e-13 80.9 168 37.5
COL.COLO4_24195 Corchorus olitorius HOM05D004343 ORTHO05D005695 3.7e-13 80.5 50 80.0
MELO3C010667.2 Cucumis melo HOM05D004343 ORTHO05D005695 4.8e-13 80.1 50 80.0
Cre01.g035500 Chlamydomonas reinhardtii HOM05D004343 ORTHO05D005695 8.2e-13 79.3 77 54.5
Oeu036965.1 Olea europaea HOM05D004343 ORTHO05D029325 5.3e-12 76.6 50 80.0
Duzib251G0882 Durio zibethinus HOM05D004343 ORTHO05D005695 7.7e-11 72.8 48 72.9
Duzib268G1271 Durio zibethinus HOM05D004343 ORTHO05D005695 7.7e-11 72.8 48 72.9
Atru.chr11.2051 Acer truncatum HOM05D004343 ORTHO05D005695 1.5e-09 68.6 48 70.8
Cfa022200 Carpinus fangiana HOM05D004343 ORTHO05D005695 3.2e-09 67.4 152 33.6
SEGI_22699 Sequoiadendron giganteum HOM05D004343 ORTHO05D005695 6.1e-08 63.2 48 60.4
Peaxi162Scf01286g00001 Petunia axillaris HOM05D004343 ORTHO05D005695 1.0e-07 62.4 188 30.3
PRCOL_00000780 Prasinoderma coloniale HOM05D004343 ORTHO05D005695 8.8e-07 59.3 76 44.7


User provided reference genes

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