Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24480 Striga asiatica HOM05D004343 ORTHO05D404906 2.8e-54 214.9 102 100.0
SGA_v2.0_scaffold181G39704 Striga asiatica HOM05D004343 ORTHO05D005695 3.0e-32 141.7 81 84.0
Migut.M00070 Erythranthe guttata HOM05D004343 ORTHO05D005695 3.4e-31 138.3 81 80.2
SalBow8G4047 Salvia bowleyana HOM05D004343 ORTHO05D005695 2.2e-30 135.6 81 79.0
Oeu022146.1 Olea europaea HOM05D004343 ORTHO05D005695 4.1e-29 131.3 81 76.5
Oeu054064.1 Olea europaea HOM05D004343 ORTHO05D005695 5.9e-28 127.5 80 75.0
DCAR_018086 Daucus carota HOM05D004343 ORTHO05D005695 1.0e-27 126.7 81 72.8
Hma1.2p1_0536F.1_g173910 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 1.3e-27 126.3 91 67.0
Lj6A807T88 Lonicera japonica HOM05D004343 ORTHO05D005695 1.3e-27 126.3 81 70.4
Nitab4.5_0001663g0240 Nicotiana tabacum HOM05D004343 ORTHO05D005695 2.9e-27 125.2 81 70.4
Cc11_g15270 Coffea canephora HOM05D004343 ORTHO05D005695 5.0e-27 124.4 81 71.6
Dinv15280 Davidia involucrata HOM05D004343 ORTHO05D005695 5.0e-27 124.4 81 72.8
Solyc04g015350.3 Solanum lycopersicum HOM05D004343 ORTHO05D005695 8.6e-27 123.6 81 71.6
Sopen04g007420 Solanum pennellii HOM05D004343 ORTHO05D005695 8.6e-27 123.6 81 71.6
Lsat_1_v5_gn_4_161060 Lactuca sativa HOM05D004343 ORTHO05D005695 1.9e-26 122.5 81 69.1
Sed0015591 Sechium edule HOM05D004343 ORTHO05D005695 1.9e-26 122.5 81 71.6
CAN.G1905.4 Capsicum annuum HOM05D004343 ORTHO05D005695 2.5e-26 122.1 81 70.4
Peaxi162Scf01286g00001 Petunia axillaris HOM05D004343 ORTHO05D005695 2.5e-26 122.1 81 67.9
HanXRQChr14g0446801 Helianthus annuus HOM05D004343 ORTHO05D005695 4.2e-26 121.3 81 69.1
Rhsim12G0115800 Rhododendron simsii HOM05D004343 ORTHO05D005695 5.5e-26 120.9 81 69.1
GSVIVG01013767001 Vitis vinifera HOM05D004343 ORTHO05D005695 9.5e-26 120.2 81 70.4
HanXRQChr17g0539451 Helianthus annuus HOM05D004343 ORTHO05D005695 1.2e-25 119.8 81 69.1
Cpa.g.sc69.63 Carica papaya HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
ECA246G3761 Erigeron canadensis HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 67.9
FvH4_4g34140 Fragaria vesca HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
FAN07G1173 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
FAN12G0317 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
FAN17G1932 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
FAN22G1014 Fragaria x ananassa HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 70.4
Manes.12G027200 Manihot esculenta HOM05D004343 ORTHO05D005695 1.6e-25 119.4 81 67.9
ClCG08G018000 Citrullus lanatus HOM05D004343 ORTHO05D005695 2.8e-25 118.6 81 70.4
CSS0036353 Camellia sinensis var. sinensis HOM05D004343 ORTHO05D005695 3.6e-25 118.2 79 69.6
MD16G1095200 Malus domestica HOM05D004343 ORTHO05D005695 3.6e-25 118.2 81 71.6
MSTRG.6617 Avicennia marina HOM05D004343 ORTHO05D005695 4.7e-25 117.9 81 71.6
CsaV3_2G024650 Cucumis sativus L. HOM05D004343 ORTHO05D005695 4.7e-25 117.9 81 70.4
Duzib268G1271 Durio zibethinus HOM05D004343 ORTHO05D005695 4.7e-25 117.9 81 69.1
Prupe.1G251400 Prunus persica HOM05D004343 ORTHO05D005695 4.7e-25 117.9 81 70.4
Hma1.2p1_0160F.1_g070980 Hydrangea macrophylla HOM05D004343 ORTHO05D005695 6.1e-25 117.5 81 69.1
Thecc.02G252600 Theobroma cacao HOM05D004343 ORTHO05D005695 8.0e-25 117.1 81 69.1
CANSAT01G0446 Cannabis sativa HOM05D004343 ORTHO05D005695 1.0e-24 116.7 81 67.9
TWI36G0660 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 1.0e-24 116.7 81 69.1
Actinidia15052 Actinidia chinensis HOM05D004343 ORTHO05D005695 1.4e-24 116.3 81 67.9
Duzib251G0882 Durio zibethinus HOM05D004343 ORTHO05D005695 1.4e-24 116.3 81 69.1
Eucgr.H02571 Eucalyptus grandis HOM05D004343 ORTHO05D005695 1.4e-24 116.3 81 67.9
MD13G1093900 Malus domestica HOM05D004343 ORTHO05D005695 1.4e-24 116.3 81 69.1
Ciclev10030717m.g Citrus clementina HOM05D004343 ORTHO05D005695 1.8e-24 115.9 81 67.9
RcHm_v2.0_Chr4g0443651 Rosa chinensis HOM05D004343 ORTHO05D005695 1.8e-24 115.9 81 67.9
Gohir.A01G161800 Gossypium hirsutum HOM05D004343 ORTHO05D005695 2.3e-24 115.5 81 67.9
Gohir.D01G149200 Gossypium hirsutum HOM05D004343 ORTHO05D005695 2.3e-24 115.5 81 67.9
Gorai.002G185300 Gossypium raimondii HOM05D004343 ORTHO05D005695 2.3e-24 115.5 81 67.9
Sabra12G0053500 Salix brachista HOM05D004343 ORTHO05D005695 2.3e-24 115.5 91 63.7
Aqoxy3G02910 Aquilegia oxysepala HOM05D004343 ORTHO05D005695 3.0e-24 115.2 81 66.7
TAR371G0394 Trochodendron aralioides HOM05D004343 ORTHO05D005695 3.0e-24 115.2 81 67.9
Atru.chr13.1904 Acer truncatum HOM05D004343 ORTHO05D005695 4.0e-24 114.8 81 67.9
Haze_12200 Corylus avellana HOM05D004343 ORTHO05D005695 4.0e-24 114.8 72 72.2
Nn2g14843 Nelumbo nucifera HOM05D004343 ORTHO05D005695 4.0e-24 114.8 81 67.9
Potri.012G075100 Populus trichocarpa HOM05D004343 ORTHO05D005695 4.0e-24 114.8 81 67.9
Atru.chr11.2051 Acer truncatum HOM05D004343 ORTHO05D005695 6.8e-24 114.0 81 67.9
Eucgr.B01666 Eucalyptus grandis HOM05D004343 ORTHO05D005695 8.9e-24 113.6 81 67.9
Eucgr.B01668 Eucalyptus grandis HOM05D004343 ORTHO05D005695 8.9e-24 113.6 81 67.9
CiPaw.06G071000 Carya illinoinensis HOM05D004343 ORTHO05D005695 1.2e-23 113.2 81 64.2
AL2G16200 Arabidopsis lyrata HOM05D004343 ORTHO05D005695 1.5e-23 112.8 81 63.0
Glyma.06G096300 Glycine max HOM05D004343 ORTHO05D005695 1.5e-23 112.8 81 66.7
TAR622G0032 Trochodendron aralioides HOM05D004343 ORTHO05D005695 1.5e-23 112.8 81 66.7
PSO675G7676 Papaver somniferum HOM05D004343 ORTHO05D005695 2.0e-23 112.5 81 69.1
A09p17490 Brassica napus HOM05D004343 ORTHO05D005695 2.6e-23 112.1 81 63.0
QL03p059677 Quercus lobata HOM05D004343 ORTHO05D005695 2.6e-23 112.1 81 66.7
Cfa009167 Carpinus fangiana HOM05D004343 ORTHO05D005695 3.4e-23 111.7 72 70.8
Glyma.04G094500 Glycine max HOM05D004343 ORTHO05D005695 3.4e-23 111.7 81 66.7
BcaB07g31219 Brassica carinata HOM05D004343 ORTHO05D005695 4.4e-23 111.3 81 63.0
BraA09t37375Z Brassica rapa HOM05D004343 ORTHO05D005695 4.4e-23 111.3 81 61.7
Sp2g04240 Schrenkiella parvula HOM05D004343 ORTHO05D005695 4.4e-23 111.3 81 63.0
THA.LOC104809607 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 4.4e-23 111.3 81 64.2
AT1G60490 Arabidopsis thaliana HOM05D004343 ORTHO05D005695 5.7e-23 110.9 81 61.7
Aa31LG2G9960 Aethionema arabicum HOM05D004343 ORTHO05D005695 7.5e-23 110.5 81 63.0
BcaC06g31812 Brassica carinata HOM05D004343 ORTHO05D005695 7.5e-23 110.5 81 63.0
Carub.0002s0485 Capsella rubella HOM05D004343 ORTHO05D005695 7.5e-23 110.5 81 61.7
PGR119G1808 Punica granatum HOM05D004343 ORTHO05D005695 7.5e-23 110.5 81 66.7
Psat2g104920 Pisum sativum HOM05D004343 ORTHO05D005695 9.8e-23 110.2 81 65.4
TPR.G21086 Trifolium pratense HOM05D004343 ORTHO05D005695 9.8e-23 110.2 81 65.4
Zm00001eb178330 Zea mays HOM05D004343 ORTHO05D005695 9.8e-23 110.2 75 68.0
Medtr5g034120 Medicago truncatula HOM05D004343 ORTHO05D005695 1.3e-22 109.8 81 65.4
TWI75G1525 Tripterygium wilfordii HOM05D004343 ORTHO05D005695 1.3e-22 109.8 82 68.3
Ca_03146_v3 Cicer arietinum L. HOM05D004343 ORTHO05D005695 2.2e-22 109.0 81 65.4
Thhalv10023282m.g Eutrema salsugineum HOM05D004343 ORTHO05D005695 2.2e-22 109.0 81 61.7
Sc04g0009240 Simmondsia chinensis HOM05D004343 ORTHO05D005695 2.2e-22 109.0 81 65.4
THA.LOC104823649 Tarenaya hassleriana HOM05D004343 ORTHO05D005695 2.8e-22 108.6 81 61.7
BcaC04g22231 Brassica carinata HOM05D004343 ORTHO05D005695 3.7e-22 108.2 81 61.7
C09p21800 Brassica napus HOM05D004343 ORTHO05D005695 3.7e-22 108.2 81 61.7
BolC9t55085H Brassica oleracea HOM05D004343 ORTHO05D005695 3.7e-22 108.2 81 61.7
Lj2g0023088 Lotus japonicus HOM05D004343 ORTHO05D005695 3.7e-22 108.2 80 66.2
VMungo1215G0144 Vigna mungo HOM05D004343 ORTHO05D005695 3.7e-22 108.2 81 64.2
Phvul.002G070100 Phaseolus vulgaris HOM05D004343 ORTHO05D005695 4.9e-22 107.8 81 64.2
EL10Ac6g13693 Beta vulgaris HOM05D004343 ORTHO05D005695 1.4e-21 106.3 81 65.4
AUR62005396 Chenopodium quinoa HOM05D004343 ORTHO05D005695 1.4e-21 106.3 81 65.4
Lalb_Chr05g0216791 Lupinus albus HOM05D004343 ORTHO05D005695 1.8e-21 105.9 81 65.4
AUR62014058 Chenopodium quinoa HOM05D004343 ORTHO05D005695 3.1e-21 105.1 81 64.2
Lalb_Chr09g0326321 Lupinus albus HOM05D004343 ORTHO05D005695 7.0e-21 104.0 81 65.4
CARHR052540 Cardamine hirsuta HOM05D004343 ORTHO05D005695 1.2e-20 103.2 72 63.9
Hund25360 Selenicereus undatus HOM05D004343 ORTHO05D005695 1.6e-20 102.8 81 63.0
Sabra15G0094700 Salix brachista HOM05D004343 ORTHO05D005695 2.0e-20 102.4 71 64.8
Ah.03g132780 Amaranthus hybridus HOM05D004343 ORTHO05D005695 2.7e-20 102.1 81 64.2
arahy.Tifrunner.gnm1.ann1.NH5LZK Arachis hypogaea HOM05D004343 ORTHO05D005695 2.7e-20 102.1 72 70.8
arahy.Tifrunner.gnm1.ann1.V3QVP0 Arachis hypogaea HOM05D004343 ORTHO05D005695 2.7e-20 102.1 72 70.8
MBI16_g27084_MAGBIO Magnolia biondii HOM05D004343 ORTHO05D005695 2.7e-20 102.1 79 62.0
HPP92_021387 Vanilla planifolia HOM05D004343 ORTHO05D005695 1.7e-19 99.4 70 67.1
AagrBONN_evm.TU.Sc2ySwM_228.633 Anthoceros agrestis HOM05D004343 ORTHO05D005695 2.9e-19 98.6 72 63.9
Os05g0180600 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 6.6e-19 97.4 75 60.0
COL.COLO4_24196 Corchorus olitorius HOM05D005103 ORTHO05D007000 1.5e-18 96.3 124 45.2
CDE05G0167 Ceratophyllum demersum HOM05D004343 ORTHO05D005695 4.3e-18 94.7 78 59.0
Pp3c10_8910 Physcomitrium patens HOM05D004343 ORTHO05D005695 4.3e-18 94.7 70 62.9
SMO134G0165 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 9.5e-18 93.6 72 56.9
Mapoly0003s0185 Marchantia polymorpha HOM05D004343 ORTHO05D005695 6.1e-17 90.9 72 59.7
ATR0624G072 Amborella trichopoda HOM05D004343 ORTHO05D005695 1.4e-16 89.7 81 58.0
SEGI_07357 Sequoiadendron giganteum HOM05D004343 ORTHO05D005695 1.4e-16 89.7 72 61.1
Os08g0307400 Oryza sativa ssp. japonica HOM05D004343 ORTHO05D005695 3.0e-16 88.6 71 60.6
BcaC02g10625 Brassica carinata HOM05D004343 ORTHO05D005695 9.8e-15 83.6 106 43.4
C04p25930 Brassica napus HOM05D004343 ORTHO05D005695 9.8e-15 83.6 106 43.4
C05p51030 Brassica napus HOM05D004343 ORTHO05D005695 9.8e-15 83.6 106 43.4
SEGI_22699 Sequoiadendron giganteum HOM05D004343 ORTHO05D005695 3.7e-14 81.6 72 54.2
SMO228G0017 Selaginella moellendorffii HOM05D004343 ORTHO05D005695 4.9e-14 81.3 69 52.2
Nitab4.5_0000147g0050 Nicotiana tabacum HOM05D004343 ORTHO05D005695 1.5e-10 69.7 60 60.0
CBR_g5616 Chara braunii HOM05D004343 ORTHO05D005695 5.6e-10 67.8 70 51.4
vmacro16235 Vaccinium macrocarpon HOM05D004343 ORTHO05D005695 1.4e-08 63.2 43 69.8
SGA_v2.0_scaffold74G24586 Striga asiatica HOM05D004343 ORTHO05D005695 2.9e-06 55.5 64 51.6
SHI17519 Sapria himalayana HOM05D004343 ORTHO05D005695 3.7e-06 55.1 39 61.5


User provided reference genes

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