Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 7.7e-132 473.8 234 100.0
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 3.2e-93 345.5 216 79.6
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 2.3e-91 339.3 211 79.6
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 3.9e-91 338.6 217 77.0
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 2.5e-90 335.9 216 79.2
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 5.6e-90 334.7 218 78.0
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.6e-89 333.2 218 78.0
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 1.6e-89 333.2 219 78.5
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 4.7e-89 331.6 219 78.1
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 8.1e-89 330.9 219 78.1
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.4e-88 330.1 226 73.5
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 8.9e-88 327.4 215 76.3
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 5.8e-87 324.7 216 75.5
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.9e-85 319.7 227 73.6
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 4.2e-85 318.5 264 65.2
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 4.2e-85 318.5 182 84.1
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.3e-83 312.8 187 81.3
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 2.3e-83 312.8 189 81.5
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 1.1e-82 310.5 207 72.9
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 1.5e-82 310.1 205 76.6
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 3.3e-82 308.9 231 70.6
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 3.3e-82 308.9 231 70.1
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 5.6e-82 308.1 191 79.6
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 9.6e-82 307.4 197 74.6
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 1.6e-81 306.6 217 72.4
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.6e-81 306.6 188 77.7
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 3.6e-81 305.4 247 66.0
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 8.1e-81 304.3 252 65.1
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.4e-80 303.5 245 65.7
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.8e-80 303.1 188 79.3
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.8e-80 303.1 245 65.7
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 1.8e-80 303.1 200 76.5
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 2.4e-80 302.8 214 69.6
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.4e-80 302.8 229 69.4
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.4e-80 302.8 229 69.4
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 3.1e-80 302.4 203 76.8
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 6.9e-80 301.2 194 75.8
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 6.9e-80 301.2 245 65.3
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 9.0e-80 300.8 244 66.8
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 9.0e-80 300.8 188 78.7
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 9.0e-80 300.8 187 78.6
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.5e-79 300.1 245 65.7
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 2.0e-79 299.7 252 64.3
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 2.0e-79 299.7 252 64.3
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.0e-79 299.7 245 66.1
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 2.0e-79 299.7 204 75.0
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 7.6e-79 297.7 211 70.6
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 7.6e-79 297.7 193 75.6
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 9.9e-79 297.4 248 64.1
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 9.9e-79 297.4 224 68.3
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.3e-78 297.0 245 64.9
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.3e-78 297.0 260 64.2
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 1.3e-78 297.0 253 64.0
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.7e-78 296.6 191 76.4
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 1.7e-78 296.6 258 64.3
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.7e-78 296.6 227 69.6
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 1.7e-78 296.6 197 75.1
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.2e-78 296.2 245 63.3
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 2.9e-78 295.8 220 69.1
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 2.9e-78 295.8 190 75.8
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 4.9e-78 295.0 202 72.8
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 8.4e-78 294.3 239 63.2
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 8.4e-78 294.3 210 73.3
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 1.1e-77 293.9 193 76.2
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 1.1e-77 293.9 193 76.2
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 1.1e-77 293.9 195 72.8
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.1e-77 293.9 188 77.1
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.1e-77 293.9 188 77.1
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.1e-77 293.9 188 77.1
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 1.9e-77 293.1 190 76.3
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 1.9e-77 293.1 191 75.9
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.9e-77 293.1 218 69.7
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.4e-77 292.7 259 62.9
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 2.4e-77 292.7 210 71.4
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 4.2e-77 292.0 239 65.7
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 4.2e-77 292.0 218 69.7
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 5.4e-77 291.6 194 76.3
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 7.1e-77 291.2 207 71.0
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 7.1e-77 291.2 187 76.5
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 9.3e-77 290.8 230 68.7
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 9.3e-77 290.8 243 63.8
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 4.6e-76 288.5 190 75.3
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 7.9e-76 287.7 193 76.7
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 7.9e-76 287.7 215 69.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 1.0e-75 287.3 238 63.4
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 1.8e-75 286.6 249 61.0
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 2.3e-75 286.2 211 69.2
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 2.5e-74 282.7 205 69.3
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 5.6e-74 281.6 185 77.8
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 1.6e-73 280.0 208 68.8
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 2.1e-73 279.6 270 57.8
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 2.8e-73 279.3 232 63.8
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 1.8e-72 276.6 171 80.1
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 2.4e-72 276.2 229 63.8
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 3.1e-72 275.8 242 62.8
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 6.9e-72 274.6 205 67.8
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 9.9e-71 270.8 185 71.9
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 9.9e-71 270.8 173 76.9
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.3e-70 270.4 221 64.3
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 7.1e-69 264.6 230 60.0
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 2.7e-68 262.7 234 60.7
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 6.7e-67 258.1 250 56.0
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 8.7e-67 257.7 180 70.0
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 3.7e-65 252.3 139 85.6
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 1.2e-55 220.7 122 86.1
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.5e-50 203.8 193 60.1
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 9.7e-50 201.1 235 49.8
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 5.3e-48 195.3 191 55.0
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 5.0e-46 188.7 105 84.8
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.2e-44 184.1 185 53.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 1.7e-41 173.7 154 62.3
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.4e-37 160.6 131 56.5
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 7.9e-36 154.8 174 48.3
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.2e-33 146.7 105 70.5
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 9.1e-32 141.4 103 69.9
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 8.5e-30 134.8 71 85.9
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.1e-29 134.4 181 45.3
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 8.2e-25 118.2 61 85.2
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 2.6e-18 96.7 80 66.2
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 2.2e-17 93.6 181 37.0
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 2.8e-17 93.2 57 77.2
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 3.7e-17 92.8 65 70.8
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 2.5e-13 80.1 77 59.7
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 2.8e-12 76.6 99 46.5
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 4.7e-12 75.9 119 45.4
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 1.2e-10 71.2 102 44.1
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 2.0e-10 70.5 44 75.0
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.4e-08 64.3 38 81.6
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 7.8e-07 58.5 85 45.9


User provided reference genes

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