Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 2.7e-64 248.4 118 100.0
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 3.0e-47 191.8 110 80.9
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 3.0e-47 191.8 110 80.9
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-42 176.4 118 69.5
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-42 176.4 118 69.5
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 6.4e-34 147.5 120 57.5
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 7.1e-33 144.1 118 61.9
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 2.7e-32 142.1 118 61.0
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 2.3e-31 139.0 110 62.7
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 2.3e-31 139.0 116 60.3
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 3.9e-31 138.3 116 60.3
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 5.1e-31 137.9 116 59.5
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 6.6e-31 137.5 118 59.3
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 8.6e-31 137.1 119 58.0
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 8.6e-31 137.1 93 67.7
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-30 136.7 117 53.8
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 2.5e-30 135.6 97 66.0
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 3.3e-30 135.2 118 55.9
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-29 132.9 103 54.4
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 6.2e-29 131.0 109 56.0
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 5.8e-27 124.4 95 64.2
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-26 123.2 70 74.3
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 4.8e-21 104.8 81 63.0
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 9.0e-20 100.5 83 56.6
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-19 100.1 82 63.4
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 5.8e-19 97.8 71 67.6
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 8.4e-18 94.0 80 57.5
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 4.8e-13 78.2 86 43.0
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.1e-12 77.0 96 42.7
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 1.1e-12 77.0 86 43.0
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-11 73.6 99 43.4
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 1.7e-10 69.7 88 40.9
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 2.2e-10 69.3 64 48.4
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 37.2
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 37.2
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 38.5
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 37.2
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 38.5
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 8.4e-10 67.4 78 37.2
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-09 67.0 78 37.2
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 1.4e-09 66.6 82 40.2
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 1.4e-09 66.6 75 42.7
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 1.9e-09 66.2 75 37.3
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 1.9e-09 66.2 88 43.2
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 4.2e-09 65.1 70 48.6
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 7.1e-09 64.3 54 50.0
EL10Ac4g08992 Beta vulgaris HOM05D000045 ORTHO05D010054 1.2e-08 63.5 77 37.7
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 2.1e-08 62.8 68 42.6
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 2.1e-08 62.8 75 40.0
AUR62034412 Chenopodium quinoa HOM05D000575 ORTHO05D000695 4.6e-08 61.6 71 42.3
HPP92_016902 Vanilla planifolia HOM05D000045 ORTHO05D000067 4.6e-08 61.6 102 31.4
COL.COLO4_24493 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.0e-08 61.2 79 35.4
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 6.0e-08 61.2 55 63.6
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 7.9e-08 60.8 88 37.5
COL.COLO4_20785 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.0e-07 60.5 79 36.7
COL.COLO4_25133 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.0e-07 60.5 79 36.7
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 1.3e-07 60.1 78 32.1
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 1.3e-07 60.1 70 40.0
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 1.3e-07 60.1 88 36.4
Nn1g09610 Nelumbo nucifera HOM05D000045 ORTHO05D000611 1.3e-07 60.1 100 32.0
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.3e-07 60.1 86 40.7
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 1.8e-07 59.7 81 37.0
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 1.8e-07 59.7 116 28.4
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.8e-07 59.7 88 35.2
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 2.3e-07 59.3 99 34.3
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 2.3e-07 59.3 99 34.3
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 2.3e-07 59.3 82 37.8
COL.COLO4_19282 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.3e-07 59.3 79 35.4
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.3e-07 59.3 99 33.3
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 3.0e-07 58.9 86 34.9
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 3.0e-07 58.9 84 36.9
EL10Ac5g10594 Beta vulgaris HOM05D000045 ORTHO05D000611 3.9e-07 58.5 99 30.3
Sc25g0002490 Simmondsia chinensis HOM05D000045 ORTHO05D000611 3.9e-07 58.5 106 34.9
CSS0014841 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 5.1e-07 58.2 93 30.1
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.1e-07 58.2 70 38.6
Gohir.A02G093800 Gossypium hirsutum HOM05D000045 ORTHO05D000611 5.1e-07 58.2 115 33.0
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 5.1e-07 58.2 99 33.3
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-07 57.8 99 33.3
Migut.N00138 Erythranthe guttata HOM05D000045 ORTHO05D000067 6.7e-07 57.8 74 35.1
Glyma.12G052000 Glycine max HOM05D000045 ORTHO05D000611 6.7e-07 57.8 101 32.7
Gohir.D02G111700 Gossypium hirsutum HOM05D000045 ORTHO05D000611 6.7e-07 57.8 115 33.0
Lalb_Chr03g0026091 Lupinus albus HOM05D000045 ORTHO05D000611 6.7e-07 57.8 113 32.7
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 6.7e-07 57.8 99 32.3
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 6.7e-07 57.8 99 32.3
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 1.1e-06 57.0 99 32.3
ECA232G4828 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.1e-06 57.0 70 38.6
PGR031G1754 Punica granatum HOM05D000045 ORTHO05D000067 1.1e-06 57.0 90 30.0
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-06 56.6 93 33.3
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-06 56.6 93 33.3
CDE05G1679 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 1.5e-06 56.6 92 33.7
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.5e-06 56.6 75 41.3
Duzib268G1506 Durio zibethinus HOM05D000045 ORTHO05D000611 1.5e-06 56.6 97 30.9
Potri.014G176500 Populus trichocarpa HOM05D000045 ORTHO05D000611 1.5e-06 56.6 108 27.8
Hund11928 Selenicereus undatus HOM05D000045 ORTHO05D000611 1.5e-06 56.6 105 33.3
SGA_v2.0_scaffold20G09063 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-06 56.6 41 70.7
TWI63G1472 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.5e-06 56.6 85 36.5
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 1.9e-06 56.2 78 33.3
CSS0008662 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-06 56.2 68 38.2
Cpa.g.sc16.55 Carica papaya HOM05D000045 ORTHO05D000067 1.9e-06 56.2 78 39.7
AUR62002320 Chenopodium quinoa HOM05D000045 ORTHO05D000611 1.9e-06 56.2 105 35.2
AUR62023864 Chenopodium quinoa HOM05D000045 ORTHO05D000611 1.9e-06 56.2 105 35.2
CSS0049102 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 55.8 68 36.8
Dinv38359 Davidia involucrata HOM05D000045 ORTHO05D000067 2.5e-06 55.8 68 36.8
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.5e-06 55.8 79 40.5
Nn1g09624 Nelumbo nucifera HOM05D000045 ORTHO05D000611 2.5e-06 55.8 65 33.8
Rhsim09G0026800 Rhododendron simsii HOM05D000045 ORTHO05D000611 2.5e-06 55.8 66 31.8
RhsimUnG0195800 Rhododendron simsii HOM05D000045 ORTHO05D000611 2.5e-06 55.8 66 31.8
Sabra14G0135100 Salix brachista HOM05D000045 ORTHO05D000611 2.5e-06 55.8 108 27.8
Aqoxy1G03148 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.3e-06 55.5 54 37.0
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 3.3e-06 55.5 96 30.2
Lalb_Chr22g0352111 Lupinus albus HOM05D000045 ORTHO05D000611 3.3e-06 55.5 74 40.5
Rhsim02G0017200 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.3e-06 55.5 68 38.2
TAR633G0558 Trochodendron aralioides HOM05D000045 ORTHO05D000611 3.3e-06 55.5 91 30.8
MSTRG.12747 Avicennia marina HOM05D000045 ORTHO05D000611 4.3e-06 55.1 73 35.6
Cpa.g.sc8.53 Carica papaya HOM05D000045 ORTHO05D000611 4.3e-06 55.1 93 30.1
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 4.3e-06 55.1 64 43.8
GSVIVG01001896001 Vitis vinifera HOM05D000045 ORTHO05D000611 4.3e-06 55.1 93 29.0
Actinidia08025 Actinidia chinensis HOM05D000045 ORTHO05D000611 5.6e-06 54.7 56 44.6
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 5.6e-06 54.7 99 32.3
CSS0031615 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 5.6e-06 54.7 64 34.4
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 5.6e-06 54.7 92 32.6
ECA236G4481 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.6e-06 54.7 92 32.6
TPR.G34188 Trifolium pratense HOM05D000045 ORTHO05D000611 5.6e-06 54.7 116 32.8
Ah.07g202110 Amaranthus hybridus HOM05D000045 ORTHO05D000611 7.4e-06 54.3 105 34.3
CAN.G1330.21 Capsicum annuum HOM05D000045 ORTHO05D000067 7.4e-06 54.3 85 38.8
Duzib151G0989 Durio zibethinus HOM05D000045 ORTHO05D000611 7.4e-06 54.3 64 39.1
Duzib175G0006 Durio zibethinus HOM05D000045 ORTHO05D000611 7.4e-06 54.3 64 39.1
FvH4_4g10891 Fragaria vesca HOM05D000045 ORTHO05D000611 7.4e-06 54.3 120 31.7
Glyma.15G029900 Glycine max HOM05D000045 ORTHO05D000611 7.4e-06 54.3 74 40.5
Gohir.A02G012400 Gossypium hirsutum HOM05D000045 ORTHO05D000611 7.4e-06 54.3 64 39.1
Manes.05G129400 Manihot esculenta HOM05D000045 ORTHO05D000067 7.4e-06 54.3 80 36.2
Rhsim02G0081200 Rhododendron simsii HOM05D000045 ORTHO05D000611 7.4e-06 54.3 56 42.9
TWI75G1823 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 7.4e-06 54.3 74 33.8
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.6e-06 53.9 82 40.2
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.6e-06 53.9 82 40.2
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.6e-06 53.9 82 40.2
MSTRG.24763 Avicennia marina HOM05D000045 ORTHO05D000067 9.6e-06 53.9 68 33.8
CANSAT78G2279 Cannabis sativa HOM05D000045 ORTHO05D000067 9.6e-06 53.9 78 37.2
Carub.0003s0704 Capsella rubella HOM05D000045 ORTHO05D000203 9.6e-06 53.9 80 27.5
Migut.G00251 Erythranthe guttata HOM05D000045 ORTHO05D000067 9.6e-06 53.9 65 35.4
Glyma.11G127400 Glycine max HOM05D000045 ORTHO05D000611 9.6e-06 53.9 101 31.7
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 9.6e-06 53.9 92 29.3
Lalb_Chr24g0396821 Lupinus albus HOM05D000045 ORTHO05D000611 9.6e-06 53.9 56 44.6
Nitab4.5_0001192g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000067 9.6e-06 53.9 68 36.8
Nitab4.5_0008568g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 9.6e-06 53.9 68 36.8
Potri.005G257600 Populus trichocarpa HOM05D000045 ORTHO05D000067 9.6e-06 53.9 80 37.5
Sabra05G0199500 Salix brachista HOM05D000045 ORTHO05D000067 9.6e-06 53.9 80 37.5
Thecc.04G178300 Theobroma cacao HOM05D000045 ORTHO05D000611 9.6e-06 53.9 74 32.4
TAR362G0325 Trochodendron aralioides HOM05D000045 ORTHO05D000611 9.6e-06 53.9 79 30.4
vmacro20404 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 9.6e-06 53.9 72 36.1


User provided reference genes

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