Gene: AUR62034412

General Information

Structural Information

  • Species Chenopodium quinoa
  • Gene Identifier AUR62034412
  • Transcript Identifier AUR62034412-RA
  • Gene Type Coding gene
  • Location C_Quinoa_Scaffold_2742 : 1535295-1544612 : positive

Gene Family Information

  • ID HOM05D000575
  • #Genes/#Species 966/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AUR62034412.v1.0
  • pacid 36287795

Descriptions

  • Description SHM4: Serine hydroxymethyltransferase 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0019264
ISO
PLAZA Homology (enrichment)glycine biosynthetic process from serine HOM05D000575
GO:0035999
ISO
PLAZA Homology (enrichment)tetrahydrofolate interconversion HOM05D000575

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
ISO
PLAZA Homology (enrichment)pyridoxal phosphate binding HOM05D000575
GO:0004372
ISO
PLAZA Homology (enrichment)glycine hydroxymethyltransferase activity HOM05D000575

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006564 Zinc finger, PMZ-type
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR031052 FHY3/FAR1 family
IPR007527 Zinc finger, SWIM-type
IPR015424 Pyridoxal phosphate-dependent transferase
IPR004330 FAR1 DNA binding domain
IPR039429 Serine hydroxymethyltransferase-like domain
Mapman id Description
15.5.44 RNA biosynthesis.transcriptional regulation.transcription factor (FRS/FRF)