Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 1.7e-287 991.9 479 100.0
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 2.4e-265 918.3 479 91.6
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 2.7e-264 914.8 479 90.8
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 9.9e-259 896.3 478 88.1
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 2.9e-258 894.8 485 87.6
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 7.8e-256 886.7 479 88.1
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 3.6e-253 877.9 473 86.9
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 3.6e-253 877.9 480 86.0
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 1.4e-252 875.9 479 86.6
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 1.4e-252 875.9 479 86.6
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 1.8e-252 875.5 478 86.8
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.7e-250 869.0 478 85.8
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 2.9e-250 868.2 479 85.4
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 3.8e-250 867.8 478 86.4
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 3.8e-250 867.8 473 86.7
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 4.9e-250 867.5 473 87.5
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 6.4e-250 867.1 472 86.4
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 6.4e-250 867.1 480 84.8
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 1.9e-249 865.5 476 85.5
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.9e-249 865.5 473 86.5
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 2.4e-249 865.1 476 85.1
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 4.2e-249 864.4 478 85.6
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 4.2e-249 864.4 473 87.1
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 1.2e-248 862.8 482 85.1
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 2.1e-248 862.1 479 85.2
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 2.7e-248 861.7 445 91.0
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 2.7e-248 861.7 477 84.7
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 3.5e-248 861.3 476 85.1
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 4.6e-248 860.9 473 86.0
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 6.0e-248 860.5 477 85.1
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 1.0e-247 859.8 478 84.5
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.3e-247 859.4 472 85.6
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 3.0e-247 858.2 480 83.5
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 6.6e-247 857.1 476 84.9
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 6.6e-247 857.1 477 84.1
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 8.7e-247 856.7 479 85.4
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 1.5e-246 855.9 443 91.0
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 3.3e-246 854.7 458 87.8
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 4.3e-246 854.4 475 86.9
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 4.3e-246 854.4 476 84.5
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 2.8e-245 851.7 477 83.4
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 4.8e-245 850.9 479 83.1
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 8.1e-245 850.1 477 83.4
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 8.1e-245 850.1 473 85.0
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 1.1e-244 849.7 479 83.7
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 1.4e-244 849.4 477 82.8
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 3.1e-244 848.2 481 83.2
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 4.0e-244 847.8 479 83.7
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 2.0e-243 845.5 479 82.7
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 2.0e-243 845.5 479 83.5
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.4e-243 844.7 486 82.9
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 5.8e-243 844.0 479 82.9
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 9.9e-243 843.2 478 84.9
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 1.7e-242 842.4 470 84.3
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.8e-242 841.3 474 83.5
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 1.9e-241 839.0 474 84.4
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 5.4e-241 837.4 480 81.9
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 7.1e-241 837.0 473 84.1
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 9.3e-241 836.6 480 84.0
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 9.3e-241 836.6 478 83.3
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 1.6e-240 835.9 478 83.9
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 2.1e-240 835.5 480 81.7
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 2.7e-240 835.1 473 83.5
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 2.7e-240 835.1 472 82.6
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 2.7e-240 835.1 478 84.3
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 4.6e-240 834.3 480 81.2
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 1.0e-239 833.2 453 84.3
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 1.0e-239 833.2 479 82.5
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 3.0e-239 831.6 479 83.1
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 3.9e-239 831.2 479 81.2
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 6.7e-239 830.5 476 83.2
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 8.7e-239 830.1 480 81.2
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 1.1e-238 829.7 473 81.8
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 2.5e-238 828.6 480 81.5
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 2.5e-238 828.6 480 81.0
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 2.5e-238 828.6 471 81.5
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 2.5e-238 828.6 473 84.1
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 3.3e-238 828.2 473 82.0
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 4.3e-238 827.8 480 81.2
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 7.4e-238 827.0 474 81.2
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 7.4e-238 827.0 480 81.2
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 9.6e-238 826.6 480 81.9
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.6e-237 825.9 473 82.9
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 4.8e-237 824.3 474 80.8
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 8.1e-237 823.5 473 82.5
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 8.1e-237 823.5 456 85.3
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 2.4e-236 822.0 491 79.0
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 4.0e-236 821.2 478 81.8
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 6.9e-236 820.5 488 79.9
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 9.0e-236 820.1 480 80.4
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 1.7e-234 815.8 475 81.3
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 1.4e-233 812.8 488 79.1
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 3.2e-233 811.6 455 82.4
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 5.5e-233 810.8 490 79.4
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 7.1e-233 810.4 478 80.8
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 9.3e-233 810.1 456 82.0
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 3.5e-232 808.1 475 79.8
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 8.2e-229 797.0 505 77.8
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 1.8e-223 779.2 480 78.3
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 6.7e-223 777.3 476 78.2
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 4.8e-221 771.2 498 75.3
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 1.1e-220 770.0 461 80.5
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 6.1e-216 754.2 505 74.3
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 3.9e-215 751.5 475 76.8
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 1.1e-214 750.0 472 77.1
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 6.5e-210 734.2 480 74.4
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 7.2e-209 730.7 469 73.3
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 6.1e-208 727.6 497 73.6
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 2.2e-205 719.2 445 74.2
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 7.0e-204 714.1 475 70.7
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 2.6e-203 712.2 448 75.0
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 3.8e-202 708.4 481 73.4
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 3.2e-201 705.3 384 84.1
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 8.2e-197 690.6 462 74.9
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 2.4e-180 636.0 458 68.8
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.1e-177 627.1 362 79.3
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 5.2e-175 618.2 368 77.7
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 2.2e-165 586.3 474 63.1
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 7.8e-163 577.8 407 73.5
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 3.5e-147 525.8 304 78.9
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-146 523.9 281 87.2
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 1.2e-144 517.3 275 86.9
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 2.0e-142 510.0 410 61.7
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 2.2e-141 506.5 304 77.3
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 7.3e-137 491.5 452 53.3
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 1.1e-124 451.1 305 70.5
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 2.4e-124 449.9 304 70.1
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 7.2e-108 395.2 211 87.2
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 9.7e-105 384.8 255 71.4
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 2.2e-101 373.6 228 77.2
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 2.2e-101 373.6 228 77.2
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 1.8e-95 354.0 413 48.2
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 7.9e-91 338.6 200 81.0
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 1.5e-89 334.3 460 44.3
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 3.8e-77 293.1 148 85.8
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 8.0e-75 285.4 424 42.0
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 1.7e-64 251.1 176 67.0
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 1.1e-63 248.4 173 70.5
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.1e-63 248.4 176 66.5
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 5.4e-63 246.1 173 69.9
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 5.8e-49 199.5 99 86.9
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 5.8e-49 199.5 99 86.9
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 9.2e-47 192.2 108 82.4
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 6.0e-38 162.9 95 84.2
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.7e-37 161.4 105 70.5
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 5.1e-37 159.8 97 75.3
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 4.0e-34 150.2 90 74.4
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 9.9e-33 145.6 77 83.1
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 3.9e-29 133.7 77 79.2
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 3.9e-21 107.1 66 71.2
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 5.1e-21 106.7 135 42.2
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 5.1e-21 106.7 56 85.7
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 3.4e-17 94.0 73 69.9
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 1.9e-15 88.2 72 63.9
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 1.9e-15 88.2 72 63.9
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 4.6e-14 83.6 54 70.4
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 2.5e-12 77.8 77 51.9
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 3.3e-12 77.4 46 76.1
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 4.8e-11 73.6 35 88.6
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 3.4e-09 67.4 42 83.3
Lsat_1_v5_gn_0_38501 Lactuca sativa HOM05D002067 ORTHO05D002244 6.0e-06 56.6 40 57.5
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 7.9e-06 56.2 34 70.6
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 7.9e-06 56.2 58 48.3


User provided reference genes

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