Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.7e-109 399.4 212 100.0
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 3.1e-79 298.9 213 78.9
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.0e-66 255.8 215 70.7
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 2.1e-64 249.6 212 66.0
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 9.3e-60 234.2 215 66.0
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.9e-53 212.6 214 58.4
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 5.0e-53 211.8 216 58.8
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 8.5e-53 211.1 215 60.0
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 2.5e-52 209.5 216 57.4
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 2.5e-52 209.5 216 57.4
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 4.2e-52 208.8 217 60.4
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 5.5e-52 208.4 213 58.2
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 7.2e-52 208.0 213 58.2
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 9.4e-52 207.6 213 58.2
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 2.7e-51 206.1 215 58.1
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 5.1e-50 201.8 217 55.8
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 1.1e-49 200.7 213 57.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 7.4e-49 198.0 215 57.2
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 7.4e-49 198.0 213 57.7
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.3e-48 197.2 215 54.0
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.3e-48 197.2 212 53.8
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.8e-48 196.1 213 55.9
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 6.9e-47 191.4 159 66.7
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.2e-46 190.7 213 54.5
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.2e-46 190.7 213 54.5
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.9e-46 188.3 208 54.8
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 7.7e-46 188.0 211 54.0
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 6.5e-45 184.9 213 50.7
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 6.5e-45 184.9 202 54.5
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 1.1e-44 184.1 214 52.3
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 1.6e-43 180.3 216 53.7
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.6e-43 180.3 220 51.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 2.1e-43 179.9 212 51.9
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 2.1e-43 179.9 213 56.3
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.7e-43 179.5 213 54.0
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.7e-43 179.5 214 53.7
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.7e-43 179.5 214 53.7
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 6.1e-43 178.3 216 51.4
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.0e-42 177.6 218 50.9
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 1.4e-42 177.2 216 52.3
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.4e-42 177.2 213 53.1
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.4e-42 177.2 216 53.7
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.8e-42 176.8 216 51.9
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 2.3e-42 176.4 212 51.9
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.3e-42 176.4 214 55.1
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 3.0e-42 176.0 215 51.6
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 3.0e-42 176.0 212 51.4
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 5.1e-42 175.3 217 51.2
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.5e-41 173.7 217 50.2
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 2.0e-41 173.3 217 51.6
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 5.7e-41 171.8 216 51.4
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 2.8e-40 169.5 149 62.4
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.8e-40 169.5 203 54.7
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 3.7e-40 169.1 214 50.5
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 8.2e-40 167.9 215 49.8
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 8.2e-40 167.9 220 49.1
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.1e-39 167.5 146 63.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.8e-39 166.8 217 48.4
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.8e-39 166.8 159 62.9
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 2.4e-39 166.4 208 51.9
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.4e-39 166.4 212 51.9
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 5.3e-39 165.2 212 50.0
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.2e-38 164.1 244 46.7
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.6e-38 162.9 215 50.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 3.5e-38 162.5 212 47.6
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 5.9e-38 161.8 212 49.1
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 5.9e-38 161.8 219 48.9
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 7.7e-38 161.4 214 50.5
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 2.9e-37 159.5 215 48.4
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.8e-37 159.1 215 50.7
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.1e-36 157.5 158 58.9
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.5e-36 157.1 211 46.4
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 4.2e-36 155.6 169 56.2
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 5.5e-36 155.2 214 49.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.6e-35 153.7 219 46.6
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 6.1e-35 151.8 216 46.3
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 6.1e-35 151.8 216 46.3
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 8.0e-35 151.4 211 49.3
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 2.3e-34 149.8 211 47.9
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 3.0e-34 149.4 213 46.0
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 5.2e-34 148.7 212 44.3
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.1e-33 147.5 213 46.9
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.0e-33 146.7 208 45.7
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.6e-33 146.4 213 45.1
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 3.3e-33 146.0 212 44.8
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 4.4e-33 145.6 212 45.8
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 5.7e-33 145.2 213 46.5
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 7.5e-33 144.8 212 44.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.7e-32 143.7 148 57.4
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.2e-32 143.3 207 45.4
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 6.3e-32 141.7 211 46.4
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 8.2e-32 141.4 159 52.8
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 3.1e-31 139.4 212 43.9
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 3.1e-31 139.4 148 57.4
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 7.0e-31 138.3 216 45.4
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.6e-30 137.1 209 42.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 5.9e-30 135.2 218 42.2
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.5e-28 130.6 215 42.3
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.9e-28 130.2 212 41.0
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 1.9e-28 130.2 129 60.5
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.2e-28 129.4 212 42.9
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 7.2e-28 128.3 211 41.2
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 9.4e-28 127.9 174 46.0
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.0e-26 124.4 164 46.3
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.4e-26 124.0 215 41.9
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 5.2e-26 122.1 214 40.7
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 8.8e-26 121.3 212 41.0
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 8.8e-26 121.3 212 41.5
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.2e-24 116.7 138 50.0
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 3.7e-24 115.9 161 42.2
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 3.1e-23 112.8 145 50.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.6e-22 110.5 243 37.4
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 2.0e-22 110.2 112 60.7
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 3.5e-22 109.4 69 79.7
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.0e-21 107.8 212 37.7
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.7e-21 107.1 146 48.6
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 8.5e-21 104.8 212 36.8
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 8.5e-21 104.8 212 36.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 2.5e-20 103.2 209 37.3
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 7.2e-20 101.7 83 65.1
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.6e-19 100.5 198 38.9
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 2.1e-19 100.1 89 59.6
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.6e-19 99.4 60 81.7
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.0e-18 97.8 212 35.8
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.4e-18 97.4 228 36.4
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 3.0e-18 96.3 156 41.7
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.3e-16 90.9 104 51.0
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.3e-16 90.9 104 50.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.3e-16 90.9 89 53.9
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.8e-16 89.7 104 49.0
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 3.7e-16 89.4 62 79.0
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.5e-12 76.6 122 43.4
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 8.0e-11 71.6 111 45.0
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-10 70.1 133 36.8
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 1.2e-09 67.8 90 46.7
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.2e-09 67.8 47 70.2
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 4.4e-09 65.9 98 44.9


User provided reference genes

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