Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 9.0e-212 740.0 363 100.0
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 9.8e-25 118.6 146 41.1
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 7.8e-22 109.0 195 28.2
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 5.0e-21 106.3 133 37.6
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.5e-20 104.8 166 33.7
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 2.8e-19 100.5 159 30.8
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 4.7e-19 99.8 144 31.2
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-19 99.0 78 41.0
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 3.1e-18 97.1 93 37.6
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 3.1e-18 97.1 85 43.5
SGA_v2.0_scaffold215G42323 Striga asiatica HOM05D008147 ORTHO05D010215 6.8e-18 95.9 157 34.4
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 2.0e-17 94.4 226 26.5
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.6e-17 94.0 85 42.4
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 4.4e-17 93.2 156 34.0
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 1.3e-16 91.7 89 38.2
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 1.7e-16 91.3 100 35.0
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-16 90.9 74 48.6
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-16 90.9 79 43.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.4e-16 89.4 85 42.4
SGA_v2.0_scaffold22G09837 Striga asiatica HOM05D010565 ORTHO05D011213 6.4e-16 89.4 66 51.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-15 88.6 85 40.0
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.4e-15 88.2 168 26.8
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 1.9e-15 87.8 150 28.7
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 1.2e-14 85.1 85 40.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 6.0e-14 82.8 177 24.9
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 7.8e-14 82.4 161 27.3
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 1.3e-13 81.6 85 38.8
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 1.7e-13 81.3 74 43.2
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.0e-13 79.7 93 35.5
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 5.0e-13 79.7 83 37.3
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 1.1e-12 78.6 80 35.0
COL.COLO4_25140 Corchorus olitorius HOM05D000003 ORTHO05D017879 1.1e-12 78.6 102 34.3
SGA_v2.0_scaffold43G16267 Striga asiatica HOM05D001376 ORTHO05D003384 1.1e-12 78.6 64 48.4
COL.COLO4_10073 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.5e-12 78.2 149 29.5
SGA_v2.0_scaffold40G15459 Striga asiatica HOM05D000090 ORTHO05D000083 3.3e-12 77.0 170 28.8
Cc09_g02940 Coffea canephora HOM05D007931 ORTHO05D011213 2.1e-11 74.3 78 39.7
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-11 73.2 93 36.6
SGA_v2.0_scaffold257G45726 Striga asiatica HOM05D010565 ORTHO05D011213 8.0e-11 72.4 95 31.6
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 8.0e-11 72.4 187 25.7
SGA_v2.0_scaffold298G47693 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-10 72.0 114 39.5
SGA_v2.0_scaffold61G21170 Striga asiatica HOM05D009140 ORTHO05D010215 2.3e-10 70.9 142 26.1
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 5.2e-10 69.7 138 31.2
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 6.8e-10 69.3 154 26.0
SGA_v2.0_scaffold170G38754 Striga asiatica HOM05D010565 ORTHO05D011213 8.9e-10 68.9 82 32.9
SGA_v2.0_scaffold18G08304 Striga asiatica HOM05D010621 ORTHO05D000126 8.9e-10 68.9 66 51.5
SGA_v2.0_scaffold19G08782 Striga asiatica HOM05D010565 ORTHO05D011213 8.9e-10 68.9 82 32.9
SGA_v2.0_scaffold1G00691 Striga asiatica HOM05D010565 ORTHO05D011213 8.9e-10 68.9 82 32.9
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-09 68.6 149 26.8
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 1.5e-09 68.2 147 25.9
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.5e-09 68.2 147 27.9
SGA_v2.0_scaffold202G41432 Striga asiatica HOM05D010565 ORTHO05D011213 2.0e-09 67.8 68 35.3
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 2.0e-09 67.8 82 31.7
SGA_v2.0_scaffold118G32508 Striga asiatica HOM05D010565 ORTHO05D011213 3.4e-09 67.0 144 25.7
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.5e-09 65.9 84 35.7
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 9.8e-09 65.5 51 45.1
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 9.8e-09 65.5 170 26.5
CARHR166210 Cardamine hirsuta HOM05D000003 ORTHO05D001498 1.3e-08 65.1 161 26.1
SGA_v2.0_scaffold42G16140 Striga asiatica HOM05D010621 ORTHO05D000004 1.7e-08 64.7 87 42.5
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 2.9e-08 63.9 67 41.8
Gohir.D11G326000 Gossypium hirsutum HOM05D000092 ORTHO05D000042 3.7e-08 63.5 87 31.0
Gorai.007G356800 Gossypium raimondii HOM05D000092 ORTHO05D000042 3.7e-08 63.5 87 31.0
SpUn0002_0230 Schrenkiella parvula HOM05D000003 ORTHO05D000925 3.7e-08 63.5 151 29.8
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 3.7e-08 63.5 145 26.9
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.9e-08 63.2 79 34.2
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-07 62.0 175 23.4
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-07 62.0 47 57.4
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 1.1e-07 62.0 50 48.0
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 1.4e-07 61.6 146 24.7
PSO675G5085 Papaver somniferum HOM05D003407 ORTHO05D001026 1.9e-07 61.2 93 37.6
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 2.4e-07 60.8 157 26.8
CARHR077050 Cardamine hirsuta HOM05D001239 ORTHO05D000925 5.4e-07 59.7 81 38.3
Atru.chr3.2165 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 59.3 135 28.1
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 7.0e-07 59.3 98 27.6
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 7.0e-07 59.3 121 29.8
Manes.10G125312 Manihot esculenta HOM05D000003 ORTHO05D000167 7.0e-07 59.3 143 27.3
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 9.2e-07 58.9 232 25.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.2e-07 58.9 98 30.6
Atru.chr1.3206 Acer truncatum HOM05D000003 ORTHO05D002259 1.2e-06 58.5 168 22.6
CANSAT11G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 58.5 150 27.3
Manes.11G132601 Manihot esculenta HOM05D010565 ORTHO05D011213 1.2e-06 58.5 77 33.8
SGA_v2.0_scaffold141G35547 Striga asiatica HOM05D010621 ORTHO05D010215 1.2e-06 58.5 59 47.5
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 58.2 179 27.9
Aa31LG10G11530 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-06 57.8 79 36.7
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 2.1e-06 57.8 89 28.1
PSO017G2202 Papaver somniferum HOM05D003407 ORTHO05D001026 2.1e-06 57.8 84 38.1
PSO541G1607 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-06 57.8 79 32.9
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.1e-06 57.8 85 32.9
Rhsim09G0012500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.1e-06 57.8 96 35.4
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 2.1e-06 57.8 55 47.3
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 2.7e-06 57.4 145 28.3
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-06 57.4 80 33.8
BcaC09g48852 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-06 57.4 80 33.8
AUR62040900 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.7e-06 57.4 96 30.2
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-06 57.0 234 25.2
Aa31LG8G11140 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-06 57.0 86 39.5
BcaC01g02475 Brassica carinata HOM05D000003 ORTHO05D000004 3.5e-06 57.0 79 34.2
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.5e-06 57.0 139 24.5
Lj5g0009119 Lotus japonicus HOM05D000003 ORTHO05D000004 4.6e-06 56.6 207 20.8
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-06 56.2 86 36.0
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-06 56.2 137 29.9
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-06 56.2 91 31.9
COL.COLO4_13695 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.0e-06 56.2 122 29.5
PSO170G5060 Papaver somniferum HOM05D007979 ORTHO05D008897 6.0e-06 56.2 176 24.4
PSO339G2736 Papaver somniferum HOM05D003407 ORTHO05D001026 6.0e-06 56.2 89 31.5
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 6.0e-06 56.2 83 32.5
SGA_v2.0_scaffold117G32378 Striga asiatica HOM05D009140 ORTHO05D011213 6.0e-06 56.2 44 43.2
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 6.0e-06 56.2 149 25.5
vmacro19083 Vaccinium macrocarpon HOM05D000458 ORTHO05D000951 6.0e-06 56.2 85 35.3
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.8e-06 55.8 89 25.8
BcaC01g03817 Brassica carinata HOM05D000003 ORTHO05D001091 7.8e-06 55.8 107 29.0
BolC3t18369H Brassica oleracea HOM05D000003 ORTHO05D000925 7.8e-06 55.8 90 36.7
BraA09t41396Z Brassica rapa HOM05D001239 ORTHO05D000925 7.8e-06 55.8 128 29.7
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.8e-06 55.8 139 23.7
CANSAT01G1078 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-06 55.8 88 35.2
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-06 55.8 131 26.7
PSO210G7487 Papaver somniferum HOM05D000003 ORTHO05D000004 7.8e-06 55.8 165 26.7


User provided reference genes

Program Settings