Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.1e-42 175.3 111 100.0
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 5.5e-28 128.6 110 74.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 2.1e-27 126.7 70 90.0
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 3.6e-27 125.9 70 90.0
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 4.7e-27 125.6 109 67.0
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 4.0e-26 122.5 66 92.4
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 8.8e-26 121.3 67 89.6
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 2.2e-24 116.7 64 89.1
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 8.3e-24 114.8 67 83.6
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 8.3e-24 114.8 68 83.8
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.8e-23 113.6 67 85.1
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 4.1e-23 112.5 67 82.1
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 4.1e-23 112.5 70 78.6
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 4.1e-23 112.5 63 87.3
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.4e-23 112.1 70 78.6
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 9.1e-23 111.3 63 87.3
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.2e-22 110.9 67 82.1
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 59 93.2
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.2e-22 110.9 71 78.9
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.6e-22 110.5 70 77.1
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.6e-22 110.5 63 87.3
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 2.7e-22 109.8 71 74.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 3.5e-22 109.4 62 85.5
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 4.5e-22 109.0 70 75.7
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 4.5e-22 109.0 62 87.1
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.5e-22 109.0 62 87.1
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 4.5e-22 109.0 63 82.5
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 5.9e-22 108.6 63 82.5
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 5.9e-22 108.6 63 84.1
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 5.9e-22 108.6 62 85.5
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 5.9e-22 108.6 62 85.5
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 7.7e-22 108.2 63 82.5
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 7.7e-22 108.2 70 77.1
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 1.0e-21 107.8 79 73.4
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.0e-21 107.8 70 75.7
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.3e-21 107.5 62 85.5
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.7e-21 107.1 65 83.1
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 2.2e-21 106.7 62 82.3
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 2.2e-21 106.7 71 74.6
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 2.2e-21 106.7 64 79.7
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 2.2e-21 106.7 63 82.5
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 2.9e-21 106.3 79 69.6
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 3.8e-21 105.9 64 79.7
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 3.8e-21 105.9 60 86.7
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 8.5e-21 104.8 66 78.8
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 8.5e-21 104.8 63 81.0
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 8.5e-21 104.8 70 72.9
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.1e-20 104.4 71 73.2
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 1.1e-20 104.4 60 83.3
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 1.1e-20 104.4 71 73.2
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.5e-20 104.0 67 77.6
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.9e-20 103.6 68 75.0
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 1.9e-20 103.6 67 76.1
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 2.5e-20 103.2 70 71.4
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 2.5e-20 103.2 63 81.0
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 3.2e-20 102.8 67 76.1
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 3.2e-20 102.8 67 76.1
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 3.2e-20 102.8 58 86.2
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 3.2e-20 102.8 69 71.0
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 5.5e-20 102.1 66 77.3
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 5.5e-20 102.1 66 77.3
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 5.5e-20 102.1 60 83.3
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 7.2e-20 101.7 66 75.8
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 7.2e-20 101.7 66 75.8
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 7.2e-20 101.7 66 75.8
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.2e-19 100.9 71 71.8
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.2e-19 100.9 60 81.7
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.2e-19 100.9 65 76.9
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.2e-19 100.9 65 76.9
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.2e-19 100.9 58 84.5
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 3.6e-19 99.4 62 79.0
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 4.7e-19 99.0 62 79.0
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 4.7e-19 99.0 62 79.0
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 4.7e-19 99.0 62 80.6
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 8.0e-19 98.2 62 77.4
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.8e-18 97.1 56 85.7
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 4.0e-18 95.9 63 76.2
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 5.2e-18 95.5 63 74.6
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 6.8e-18 95.1 63 74.6
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 8.8e-18 94.7 59 78.0
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.5e-17 94.0 55 81.8
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.5e-17 94.0 56 82.1
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 2.0e-17 93.6 66 72.7
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 2.0e-17 93.6 60 78.3
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.6e-17 93.2 66 74.2
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.4e-17 92.4 51 88.2
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 2.8e-16 89.7 51 84.3
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 7.0e-15 85.1 64 67.2
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 9.2e-15 84.7 60 71.7
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.2e-14 84.3 60 70.0
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.7e-14 83.2 48 85.4
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.9e-14 82.0 62 69.4
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.3e-13 80.9 63 68.3
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 5.0e-13 79.0 48 79.2
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.1e-07 61.2 60 51.7


User provided reference genes

Program Settings