Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-68 261.5 123 100.0
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 3.1e-47 191.8 214 51.9
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 2.4e-44 182.2 113 78.8
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-43 179.5 108 80.6
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 2.7e-35 152.1 110 62.7
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-31 140.2 97 67.0
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-31 140.2 97 67.0
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 5.8e-30 134.4 97 66.0
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 1.1e-28 130.2 102 56.9
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-28 129.4 115 50.4
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 2.5e-28 129.0 92 64.1
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-28 128.6 96 64.6
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-28 128.6 96 64.6
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 5.5e-28 127.9 110 58.2
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-27 126.7 110 58.2
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 1.8e-26 122.9 92 60.9
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 1.8e-26 122.9 91 57.1
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 3.0e-26 122.1 82 62.2
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 3.0e-26 122.1 92 63.0
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-25 119.4 91 54.9
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 4.3e-25 118.2 91 56.0
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-22 109.8 84 61.9
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-22 109.8 70 70.0
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.0e-21 107.1 77 63.6
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-17 93.6 65 73.8
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-17 93.2 65 61.5
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-17 92.8 65 60.0
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-15 87.0 66 56.1
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.1e-15 87.0 95 42.1
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-13 79.7 95 45.3
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-12 77.0 74 40.5
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-12 77.0 74 40.5
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-12 77.0 74 40.5
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-12 77.0 74 40.5
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 1.4e-12 76.6 74 40.5
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 1.4e-12 76.6 74 40.5
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 3.2e-12 75.5 95 36.8
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 3.2e-12 75.5 95 36.8
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 7.2e-12 74.3 93 38.7
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 1.2e-11 73.6 67 46.3
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 1.6e-11 73.2 91 41.8
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 6.1e-11 71.2 56 50.0
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.9e-11 70.9 67 43.3
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 7.9e-11 70.9 72 48.6
Ah.07g198010 Amaranthus hybridus HOM05D000045 ORTHO05D010054 1.0e-10 70.5 103 34.0
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 1.4e-10 70.1 76 36.8
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 1.4e-10 70.1 64 46.9
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 3.0e-10 68.9 92 39.1
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 5.1e-10 68.2 92 39.1
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-10 67.8 106 34.9
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 6.7e-10 67.8 62 46.8
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 8.8e-10 67.4 64 50.0
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.1e-09 67.0 92 39.1
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 1.5e-09 66.6 72 41.7
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 2.0e-09 66.2 62 45.2
SGA_v2.0_scaffold20G09063 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-09 66.2 37 78.4
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 2.6e-09 65.9 74 36.5
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.5 106 33.0
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 3.3e-09 65.5 106 33.0
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.5 106 33.0
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.5 106 33.0
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.5 106 33.0
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.5 106 33.0
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.4e-09 65.1 79 41.8
Nn7g36622 Nelumbo nucifera HOM05D000045 ORTHO05D000611 4.4e-09 65.1 85 38.8
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 5.7e-09 64.7 76 40.8
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 5.7e-09 64.7 61 44.3
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 9.7e-09 63.9 106 32.1
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 1.3e-08 63.5 89 32.6
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 1.7e-08 63.2 106 32.1
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 2.8e-08 62.4 106 32.1
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 2.8e-08 62.4 70 42.9
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.7e-08 62.0 77 42.9
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 4.8e-08 61.6 93 33.3
Hund09722 Selenicereus undatus HOM05D020589 ORTHO05D010054 8.2e-08 60.8 50 50.0
AUR62034412 Chenopodium quinoa HOM05D000575 ORTHO05D000695 1.1e-07 60.5 111 35.1
Hund08061 Selenicereus undatus HOM05D020589 ORTHO05D010054 1.1e-07 60.5 50 48.0
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.4e-07 60.1 85 35.3
Hund02084 Selenicereus undatus HOM05D020589 ORTHO05D010054 1.4e-07 60.1 95 34.7
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 2.4e-07 59.3 75 38.7
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.4e-07 59.3 93 33.3
EL10Ac6g13880 Beta vulgaris HOM05D000045 ORTHO05D010054 3.1e-07 58.9 101 27.7
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 4.1e-07 58.5 89 30.3
EL10Ac1g01220 Beta vulgaris HOM05D000045 ORTHO05D010054 5.3e-07 58.2 106 30.2
ECA232G4828 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.0e-07 57.8 77 40.3
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 7.0e-07 57.8 89 30.3
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 7.0e-07 57.8 89 30.3
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 9.1e-07 57.4 91 33.0
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 1.2e-06 57.0 63 42.9
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 1.2e-06 57.0 82 36.6
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 1.5e-06 56.6 93 37.6
CSS0018875 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-06 56.6 70 37.1
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.5e-06 56.6 85 35.3
CDE05G1679 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 1.5e-06 56.6 85 35.3
Hund11928 Selenicereus undatus HOM05D000045 ORTHO05D000611 1.5e-06 56.6 72 44.4
TWI63G1472 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.5e-06 56.6 63 50.8
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-06 56.2 70 37.1
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-06 56.2 70 37.1
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 2.0e-06 56.2 58 46.6
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.6e-06 55.8 82 32.9
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.6e-06 55.8 82 32.9
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.6e-06 55.8 82 32.9
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 2.6e-06 55.8 85 35.3
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 2.6e-06 55.8 69 37.7
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 2.6e-06 55.8 65 40.0
SGA_v2.0_scaffold234G43644 Striga asiatica HOM05D014194 ORTHO05D014656 3.4e-06 55.5 74 37.8
TAR636G2452 Trochodendron aralioides HOM05D000045 ORTHO05D000611 3.4e-06 55.5 80 37.5
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-06 55.1 82 31.7
CSS0016804 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.5e-06 55.1 65 38.5
AUR62026947 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.5e-06 55.1 95 35.8
Migut.N00138 Erythranthe guttata HOM05D000045 ORTHO05D000067 4.5e-06 55.1 66 42.4
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 4.5e-06 55.1 91 33.0
Sed0016717 Sechium edule HOM05D000045 ORTHO05D000611 4.5e-06 55.1 64 46.9
vmacro20404 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 4.5e-06 55.1 72 38.9
Ah.06g183700 Amaranthus hybridus HOM05D000045 ORTHO05D010054 5.9e-06 54.7 54 46.3
COL.COLO4_24493 Corchorus olitorius HOM05D000045 ORTHO05D000067 5.9e-06 54.7 65 36.9
Hma1.2p1_0810F.1_g222000 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 5.9e-06 54.7 61 41.0
SGA_v2.0_scaffold47G17527 Striga asiatica HOM05D014194 ORTHO05D014656 5.9e-06 54.7 74 36.5
Atru.chr1.251 Acer truncatum HOM05D009041 ORTHO05D019408 7.7e-06 54.3 59 42.4
AUR62035958 Chenopodium quinoa HOM05D009508 ORTHO05D000695 7.7e-06 54.3 89 34.8
Lalb_Chr03g0026091 Lupinus albus HOM05D000045 ORTHO05D000611 7.7e-06 54.3 56 48.2
TAR362G0617 Trochodendron aralioides HOM05D000045 ORTHO05D000611 7.7e-06 54.3 77 35.1


User provided reference genes

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