Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21774 Striga asiatica HOM05D002781 ORTHO05D003382 5.2e-48 194.1 102 100.0
SGA_v2.0_scaffold63G21766 Striga asiatica HOM05D002781 ORTHO05D003382 3.2e-34 148.3 95 86.3
SGA_v2.0_scaffold17G08116 Striga asiatica HOM05D002781 ORTHO05D003382 1.3e-22 109.8 138 51.4
SGA_v2.0_scaffold17G08122 Striga asiatica HOM05D002781 ORTHO05D003382 1.5e-18 96.3 142 47.9
SGA_v2.0_scaffold20G09307 Striga asiatica HOM05D002781 ORTHO05D003382 3.6e-17 91.7 118 49.2
SGA_v2.0_scaffold51G18727 Striga asiatica HOM05D002781 ORTHO05D003382 9.8e-15 83.6 51 82.4
MSTRG.13933 Avicennia marina HOM05D002781 ORTHO05D003382 6.4e-14 80.9 142 42.3
Migut.E01411 Erythranthe guttata HOM05D002781 ORTHO05D003382 1.8e-13 79.3 169 37.3
SalBow8G0076 Salvia bowleyana HOM05D002781 ORTHO05D003382 1.0e-11 73.6 121 40.5
Oeu019276.1 Olea europaea HOM05D002781 ORTHO05D003382 1.5e-10 69.7 144 37.5
Oeu039634.1 Olea europaea HOM05D002781 ORTHO05D003382 1.5e-10 69.7 144 37.5
ATR0626G153 Amborella trichopoda HOM05D002781 ORTHO05D003382 7.3e-10 67.4 64 57.8
HPP92_010332 Vanilla planifolia HOM05D002781 ORTHO05D003382 1.6e-09 66.2 121 34.7
Oeu014115.1 Olea europaea HOM05D002781 ORTHO05D003382 2.1e-09 65.9 74 52.7
ATR0665G037 Amborella trichopoda HOM05D002781 ORTHO05D003382 4.7e-09 64.7 64 54.7
MELO3C003651.2 Cucumis melo HOM05D002781 ORTHO05D003382 1.4e-08 63.2 66 53.0
unitig_747.g21377 Utricularia gibba HOM05D002781 ORTHO05D003382 1.4e-08 63.2 126 34.1
Dinv09454 Davidia involucrata HOM05D002781 ORTHO05D003382 1.8e-08 62.8 55 56.4
unitig_0.g2193 Utricularia gibba HOM05D002781 ORTHO05D003382 1.8e-08 62.8 54 61.1
AUR62023712 Chenopodium quinoa HOM05D002781 ORTHO05D003382 3.1e-08 62.0 47 57.4
Lj6A614T28 Lonicera japonica HOM05D002781 ORTHO05D003382 5.2e-08 61.2 51 58.8
MBI13_g33568_MAGBIO Magnolia biondii HOM05D002781 ORTHO05D003382 6.8e-08 60.8 64 46.9
Aqoxy7G02657 Aquilegia oxysepala HOM05D002781 ORTHO05D003382 8.9e-08 60.5 64 40.6
CSS0040336 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 8.9e-08 60.5 54 53.7
Ah.13g073200 Amaranthus hybridus HOM05D002781 ORTHO05D003382 1.2e-07 60.1 47 61.7
vmacro05094 Vaccinium macrocarpon HOM05D002781 ORTHO05D003382 1.5e-07 59.7 69 47.8
CSS0028741 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 2.0e-07 59.3 63 47.6
Nn8g41173 Nelumbo nucifera HOM05D002781 ORTHO05D003382 2.6e-07 58.9 48 56.2
Potri.006G085400 Populus trichocarpa HOM05D002781 ORTHO05D003382 2.6e-07 58.9 51 60.8
SalBow1G4615 Salvia bowleyana HOM05D002781 ORTHO05D003382 2.6e-07 58.9 117 35.0
EL10Ac3g06163 Beta vulgaris HOM05D002781 ORTHO05D003382 4.4e-07 58.2 47 57.4
CSS0008198 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 4.4e-07 58.2 63 47.6
Nn4g24942 Nelumbo nucifera HOM05D002781 ORTHO05D003382 4.4e-07 58.2 48 54.2
PSO017G0307 Papaver somniferum HOM05D002781 ORTHO05D003382 4.4e-07 58.2 52 55.8
PSO478G0309 Papaver somniferum HOM05D002781 ORTHO05D003382 4.4e-07 58.2 52 55.8
Peaxi162Scf00619g00214 Petunia axillaris HOM05D002781 ORTHO05D003382 4.4e-07 58.2 126 31.7
SalBow1G0367 Salvia bowleyana HOM05D002781 ORTHO05D003382 4.4e-07 58.2 142 35.9
SalBow1G1421 Salvia bowleyana HOM05D002781 ORTHO05D003382 4.4e-07 58.2 142 35.9
TWI63G0346 Tripterygium wilfordii HOM05D002781 ORTHO05D003382 4.4e-07 58.2 57 56.1
CAN.G1921.4 Capsicum annuum HOM05D002781 ORTHO05D003382 5.8e-07 57.8 123 34.1
CDE02G0432 Ceratophyllum demersum HOM05D002781 ORTHO05D003382 7.5e-07 57.4 138 33.3
Hund22584 Selenicereus undatus HOM05D002781 ORTHO05D003382 7.5e-07 57.4 118 34.7
TAR383G0197 Trochodendron aralioides HOM05D002781 ORTHO05D003382 7.5e-07 57.4 51 54.9
ClCG05G017340 Citrullus lanatus HOM05D002781 ORTHO05D003382 9.8e-07 57.0 64 50.0
Sopen05g034640 Solanum pennellii HOM05D002781 ORTHO05D003382 9.8e-07 57.0 127 30.7
TWI34G0804 Tripterygium wilfordii HOM05D002781 ORTHO05D003382 9.8e-07 57.0 64 50.0
vmacro05095 Vaccinium macrocarpon HOM05D002781 ORTHO05D003382 9.8e-07 57.0 43 65.1
HPP92_010423 Vanilla planifolia HOM05D002781 ORTHO05D003382 1.3e-06 56.6 123 30.9
Lsat_1_v5_gn_1_72341 Lactuca sativa HOM05D002781 ORTHO05D003382 1.7e-06 56.2 54 55.6
Lsat_1_v5_gn_5_33240 Lactuca sativa HOM05D002781 ORTHO05D003382 1.7e-06 56.2 57 52.6
Sabra06G0064900 Salix brachista HOM05D002781 ORTHO05D003382 1.7e-06 56.2 50 62.0
Manes.02G204300 Manihot esculenta HOM05D002781 ORTHO05D003382 2.2e-06 55.8 116 34.5
Nitab4.5_0001449g0030 Nicotiana tabacum HOM05D002781 ORTHO05D003382 2.2e-06 55.8 127 31.5
TAR626G1626 Trochodendron aralioides HOM05D002781 ORTHO05D003382 2.2e-06 55.8 45 55.6
Solyc05g056250.3 Solanum lycopersicum HOM05D002781 ORTHO05D003382 2.9e-06 55.5 127 29.9
CsaV3_3G046850 Cucumis sativus L. HOM05D002781 ORTHO05D003382 3.7e-06 55.1 57 45.6
Sed0018818 Sechium edule HOM05D002781 ORTHO05D003382 3.7e-06 55.1 82 42.7
SEGI_02968 Sequoiadendron giganteum HOM05D002781 ORTHO05D003382 3.7e-06 55.1 68 48.5
ATR0463G001 Amborella trichopoda HOM05D002781 ORTHO05D003382 4.9e-06 54.7 49 55.1
HanXRQChr11g0342691 Helianthus annuus HOM05D002781 ORTHO05D003382 4.9e-06 54.7 54 50.0
Hma1.2p1_1470F.1_g285580 Hydrangea macrophylla HOM05D002781 ORTHO05D003382 4.9e-06 54.7 56 50.0
Rhsim07G0113300 Rhododendron simsii HOM05D002781 ORTHO05D003382 4.9e-06 54.7 50 52.0
Rhsim07G0113700 Rhododendron simsii HOM05D002781 ORTHO05D003382 4.9e-06 54.7 50 52.0
Actinidia25730 Actinidia chinensis HOM05D002781 ORTHO05D003382 6.4e-06 54.3 53 49.1
Nitab4.5_0000080g0320 Nicotiana tabacum HOM05D002781 ORTHO05D003382 6.4e-06 54.3 126 31.0


User provided reference genes

Program Settings