Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 2.5e-164 582.0 295 100.0
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.2e-28 131.3 79 84.8
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.6e-25 120.9 92 68.5
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 8.0e-25 118.6 99 61.6
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 5.2e-24 115.9 79 74.7
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 6.7e-24 115.5 78 78.2
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 8.8e-24 115.2 79 73.4
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 5.7e-23 112.5 79 74.7
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 7.4e-23 112.1 79 72.2
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 7.4e-23 112.1 79 72.2
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 7.4e-23 112.1 94 60.6
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.2e-22 110.5 69 79.7
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.8e-22 110.2 88 68.2
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 2.8e-22 110.2 79 73.4
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 6.3e-22 109.0 78 70.5
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.1e-21 108.2 78 73.1
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.1e-21 108.2 78 73.1
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.4e-21 107.8 78 73.1
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.8e-21 107.5 78 69.2
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.8e-21 107.5 71 76.1
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.8e-21 107.5 78 71.8
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.8e-21 107.5 78 71.8
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.4e-21 107.1 89 64.0
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 4.1e-21 106.3 69 78.3
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 5.3e-21 105.9 78 70.5
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 5.3e-21 105.9 102 57.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 7.0e-21 105.5 78 70.5
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.6e-20 104.4 97 57.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.0e-20 104.0 79 70.9
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 3.5e-20 103.2 77 70.1
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 3.5e-20 103.2 152 45.4
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 7.7e-20 102.1 71 70.4
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.7e-19 100.9 96 57.3
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.7e-19 100.9 96 57.3
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 2.9e-19 100.1 78 67.9
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 3.8e-19 99.8 97 57.7
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.8e-19 99.8 100 56.0
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 6.5e-19 99.0 125 49.6
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 6.5e-19 99.0 78 67.9
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 6.5e-19 99.0 75 69.3
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.1e-18 98.2 78 66.7
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.1e-18 98.2 121 48.8
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.5e-18 97.8 97 54.6
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.5e-18 97.8 78 66.7
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 1.5e-18 97.8 133 48.1
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 3.2e-18 96.7 78 66.7
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 4.2e-18 96.3 79 64.6
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 5.5e-18 95.9 82 61.0
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 5.5e-18 95.9 78 66.7
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 5.5e-18 95.9 79 65.8
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 7.2e-18 95.5 75 66.7
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 9.4e-18 95.1 90 60.0
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.2e-17 94.7 104 52.9
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.2e-17 94.7 96 56.2
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.2e-17 94.7 78 66.7
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.2e-17 94.7 87 59.8
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.2e-17 94.7 78 65.4
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 2.1e-17 94.0 96 55.2
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.1e-17 94.0 96 55.2
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.1e-17 94.0 79 63.3
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 2.7e-17 93.6 96 55.2
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.6e-17 93.2 70 71.4
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 3.6e-17 93.2 77 62.3
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.7e-17 92.8 78 65.4
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 4.7e-17 92.8 78 65.4
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 4.7e-17 92.8 92 57.6
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 6.1e-17 92.4 126 48.4
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 6.1e-17 92.4 78 64.1
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 8.0e-17 92.0 69 68.1
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.0e-16 91.7 78 66.7
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.0e-16 91.7 112 46.4
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.4e-16 91.3 96 53.1
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.8e-16 90.9 97 52.6
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.3e-16 90.5 78 64.1
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-16 90.5 69 68.1
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-16 90.5 87 58.6
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.3e-16 90.5 99 54.5
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 3.0e-16 90.1 87 57.5
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 4.0e-16 89.7 96 53.1
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 5.2e-16 89.4 78 61.5
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 5.2e-16 89.4 69 66.7
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.2e-16 89.4 69 66.7
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 8.8e-16 88.6 78 61.5
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 8.8e-16 88.6 78 61.5
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 8.8e-16 88.6 78 61.5
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.2e-15 88.2 116 44.8
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.5e-15 87.8 57 73.7
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.5e-15 87.8 96 53.1
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 2.0e-15 87.4 91 54.9
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 2.0e-15 87.4 91 54.9
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 2.0e-15 87.4 78 60.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.6e-15 87.0 97 51.5
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 3.4e-15 86.7 75 62.7
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 3.4e-15 86.7 57 71.9
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 4.4e-15 86.3 78 59.0
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 4.4e-15 86.3 75 64.0
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 5.7e-15 85.9 78 59.0
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 5.7e-15 85.9 78 60.3
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 7.5e-15 85.5 57 71.9
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 7.5e-15 85.5 88 55.7
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 2.2e-14 84.0 91 51.6
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.2e-14 84.0 75 62.7
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 3.7e-14 83.2 78 62.8
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 4.8e-14 82.8 136 39.0
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 4.8e-14 82.8 75 58.7
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 8.3e-14 82.0 103 52.4
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.3e-14 82.0 75 65.3
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.1e-13 81.6 76 56.6
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.4e-13 81.3 69 60.9
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 1.8e-13 80.9 58 69.0
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 3.1e-13 80.1 57 71.9
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.6e-12 77.8 76 53.9
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.5e-12 76.6 78 51.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 7.7e-12 75.5 107 43.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 7.7e-12 75.5 107 43.0
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.0e-11 75.1 106 46.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.0e-11 75.1 57 66.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-11 74.7 80 52.5
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 2.9e-11 73.6 63 60.3
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.9e-11 73.6 69 53.6
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 3.8e-11 73.2 74 51.4
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.6e-09 67.8 107 38.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 3.6e-09 66.6 73 50.7
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 6.1e-09 65.9 96 43.8
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.0e-08 65.1 71 47.9
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.8e-08 64.3 48 68.8
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.2e-08 62.8 96 45.8
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 5.2e-08 62.8 59 52.5
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 4.8e-06 56.2 34 76.5
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 8.3e-06 55.5 73 46.6


User provided reference genes

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