Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21761 Striga asiatica HOM05D002238 ORTHO05D001984 4.3e-112 407.9 195 100.0
SGA_v2.0_scaffold63G21756 Striga asiatica HOM05D002238 ORTHO05D001984 1.2e-29 134.0 70 98.6
SGA_v2.0_scaffold96G29097 Striga asiatica HOM05D002238 ORTHO05D001984 1.2e-29 134.0 70 98.6
SGA_v2.0_scaffold347G49567 Striga asiatica HOM05D002238 ORTHO05D001984 4.6e-29 132.1 70 97.1
Oeu009627.1 Olea europaea HOM05D002238 ORTHO05D001984 8.7e-28 127.9 70 91.4
CSS0015125 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D001984 1.9e-27 126.7 70 91.4
CSS0035678 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D001984 1.9e-27 126.7 70 91.4
Migut.N01823 Erythranthe guttata HOM05D002238 ORTHO05D001984 2.5e-27 126.3 70 90.0
SalBow4G2450 Salvia bowleyana HOM05D002238 ORTHO05D001984 2.5e-27 126.3 70 90.0
Dinv21284 Davidia involucrata HOM05D002238 ORTHO05D001984 3.3e-27 125.9 70 87.1
vmacro12095 Vaccinium macrocarpon HOM05D002238 ORTHO05D001984 5.6e-27 125.2 70 91.4
Oeu027351.4 Olea europaea HOM05D002238 ORTHO05D001984 9.6e-27 124.4 70 87.1
SGA_v2.0_scaffold7G04028 Striga asiatica HOM05D002238 ORTHO05D001984 2.8e-26 122.9 72 88.9
MSTRG.27160 Avicennia marina HOM05D002238 ORTHO05D001984 3.6e-26 122.5 72 83.3
ECA238G4099 Erigeron canadensis HOM05D002238 ORTHO05D001984 1.4e-25 120.6 70 85.7
Hma1.2p1_0017F.1_g011480 Hydrangea macrophylla HOM05D002238 ORTHO05D001984 1.4e-25 120.6 70 85.7
Phvul.004G077200 Phaseolus vulgaris HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 87.1
Prupe.3G198900 Prunus persica HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 87.1
Prupe.6G340200 Prunus persica HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 87.1
Rhsim01G0200000 Rhododendron simsii HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 87.1
Rhsim01G0212800 Rhododendron simsii HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 87.1
TPR.G24144 Trifolium pratense HOM05D002238 ORTHO05D001984 1.8e-25 120.2 70 84.3
Lsat_1_v5_gn_7_95300 Lactuca sativa HOM05D002238 ORTHO05D001984 2.4e-25 119.8 70 84.3
VMungo0647G0871 Vigna mungo HOM05D000829 ORTHO05D001984 3.1e-25 119.4 70 85.7
Atru.chr6.3380 Acer truncatum HOM05D002238 ORTHO05D001984 4.0e-25 119.0 70 82.9
RcHm_v2.0_Chr2g0156191 Rosa chinensis HOM05D002238 ORTHO05D001984 4.0e-25 119.0 70 85.7
Ciclev10016158m.g Citrus clementina HOM05D002238 ORTHO05D001984 5.3e-25 118.6 70 82.9
Potri.014G166200 Populus trichocarpa HOM05D002238 ORTHO05D001984 5.3e-25 118.6 70 82.9
Rhsim06G0175300 Rhododendron simsii HOM05D002238 ORTHO05D001984 5.3e-25 118.6 70 85.7
RcHm_v2.0_Chr4g0385201 Rosa chinensis HOM05D002238 ORTHO05D001984 5.3e-25 118.6 70 84.3
Sabra14G0126500 Salix brachista HOM05D002238 ORTHO05D001984 5.3e-25 118.6 70 82.9
Sed0014080 Sechium edule HOM05D002238 ORTHO05D001984 5.3e-25 118.6 118 57.6
Cc02_g30130 Coffea canephora HOM05D002238 ORTHO05D001984 6.9e-25 118.2 70 87.1
Hma1.2p1_0108F.1_g051790 Hydrangea macrophylla HOM05D002238 ORTHO05D001984 6.9e-25 118.2 70 84.3
arahy.Tifrunner.gnm1.ann1.DIZ14G Arachis hypogaea HOM05D002238 ORTHO05D001984 9.0e-25 117.9 71 80.3
arahy.Tifrunner.gnm1.ann1.VW2QG0 Arachis hypogaea HOM05D002238 ORTHO05D001984 9.0e-25 117.9 71 80.3
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 9.0e-25 117.9 70 85.7
Glyma.16G151700 Glycine max HOM05D002238 ORTHO05D001984 9.0e-25 117.9 70 84.3
Glyma.02G070100 Glycine max HOM05D002238 ORTHO05D001984 1.2e-24 117.5 71 81.7
Lj2g0027163 Lotus japonicus HOM05D002238 ORTHO05D001984 1.2e-24 117.5 82 75.6
Lj5g0021748 Lotus japonicus HOM05D002238 ORTHO05D001984 1.2e-24 117.5 82 75.6
MD17G1115700 Malus domestica HOM05D002238 ORTHO05D001984 1.2e-24 117.5 70 84.3
vmacro03834 Vaccinium macrocarpon HOM05D002238 ORTHO05D001984 1.2e-24 117.5 70 87.1
Ca_22317_v3 Cicer arietinum L. HOM05D002238 ORTHO05D001984 1.5e-24 117.1 70 82.9
Phvul.008G288600 Phaseolus vulgaris HOM05D002238 ORTHO05D001984 1.5e-24 117.1 70 84.3
SalBow1G1877 Salvia bowleyana HOM05D002238 ORTHO05D001984 1.5e-24 117.1 69 87.0
MBI07_g04746_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D001984 2.6e-24 116.3 71 83.1
Sed0013246 Sechium edule HOM05D002238 ORTHO05D001984 2.6e-24 116.3 70 81.4
TAR629G0143 Trochodendron aralioides HOM05D002238 ORTHO05D001984 2.6e-24 116.3 70 84.3
PGR044G1809 Punica granatum HOM05D002238 ORTHO05D001984 3.4e-24 115.9 70 78.6
MBI16_g14386_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D001984 4.5e-24 115.5 71 83.1
MBI16_g20582_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D001984 4.5e-24 115.5 71 83.1
Medtr8g077430 Medicago truncatula HOM05D002238 ORTHO05D001984 4.5e-24 115.5 70 82.9
SalBow1G0040 Salvia bowleyana HOM05D002238 ORTHO05D001984 4.5e-24 115.5 70 84.3
FvH4_6g40740 Fragaria vesca HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 81.4
FAN09G1531 Fragaria x ananassa HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 81.4
FAN14G0117 Fragaria x ananassa HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 81.4
HanXRQChr04g0126541 Helianthus annuus HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 81.4
Lj1A794T53 Lonicera japonica HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 82.9
QL02p019830 Quercus lobata HOM05D002238 ORTHO05D001984 5.8e-24 115.2 70 82.9
FAN02G1526 Fragaria x ananassa HOM05D002238 ORTHO05D001984 7.6e-24 114.8 70 80.0
FAN05G0939 Fragaria x ananassa HOM05D002238 ORTHO05D001984 7.6e-24 114.8 70 80.0
Lalb_Chr10g0095971 Lupinus albus HOM05D002238 ORTHO05D001984 7.6e-24 114.8 70 80.0
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 7.6e-24 114.8 70 82.9
Eucgr.G02573 Eucalyptus grandis HOM05D002238 ORTHO05D001984 9.9e-24 114.4 70 78.6
Thhalv10021262m.g Eutrema salsugineum HOM05D002238 ORTHO05D001984 9.9e-24 114.4 70 78.6
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 9.9e-24 114.4 70 81.4
unitig_52.g17116 Utricularia gibba HOM05D002238 ORTHO05D001984 9.9e-24 114.4 71 84.5
Sp3g06680 Schrenkiella parvula HOM05D002238 ORTHO05D001984 1.3e-23 114.0 70 77.1
BcaB04g21272 Brassica carinata HOM05D002238 ORTHO05D001984 1.7e-23 113.6 72 75.0
Ca_12576_v3 Cicer arietinum L. HOM05D002238 ORTHO05D001984 1.7e-23 113.6 70 81.4
CsaV3_1G001380 Cucumis sativus L. HOM05D002238 ORTHO05D001984 1.7e-23 113.6 70 81.4
Aqoxy4G02593 Aquilegia oxysepala HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 78.6
BolC1t05536H Brassica oleracea HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 77.1
BraA01t04366Z Brassica rapa HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 77.1
HanXRQChr17g0537591 Helianthus annuus HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 80.0
MD09G1125700 Malus domestica HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 82.9
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 2.2e-23 113.2 70 80.0
Aqoxy2G01045 Aquilegia oxysepala HOM05D002238 ORTHO05D001984 2.9e-23 112.8 70 78.6
MELO3C008154.2 Cucumis melo HOM05D002238 ORTHO05D001984 2.9e-23 112.8 70 78.6
Gohir.D04G004500 Gossypium hirsutum HOM05D002238 ORTHO05D001984 2.9e-23 112.8 70 78.6
Gorai.012G005700 Gossypium raimondii HOM05D002238 ORTHO05D001984 2.9e-23 112.8 70 78.6
TWI36G1349 Tripterygium wilfordii HOM05D002238 ORTHO05D001984 2.9e-23 112.8 70 80.0
AL3G19110 Arabidopsis lyrata HOM05D002238 ORTHO05D001984 3.8e-23 112.5 70 77.1
AT3G07750 Arabidopsis thaliana HOM05D002238 ORTHO05D001984 3.8e-23 112.5 70 77.1
Carub.0003s0733 Capsella rubella HOM05D002238 ORTHO05D001984 3.8e-23 112.5 70 77.1
CARHR082460 Cardamine hirsuta HOM05D002238 ORTHO05D001984 3.8e-23 112.5 70 77.1
BcaC05g29568 Brassica carinata HOM05D002238 ORTHO05D001984 4.9e-23 112.1 70 77.1
Hund01750 Selenicereus undatus HOM05D002238 ORTHO05D001984 4.9e-23 112.1 72 84.7
GSVIVG01035933001 Vitis vinifera HOM05D002238 ORTHO05D001984 4.9e-23 112.1 70 78.6
Cpa.g.sc211.23 Carica papaya HOM05D002238 ORTHO05D001984 6.4e-23 111.7 70 77.1
THA.LOC104819037 Tarenaya hassleriana HOM05D002238 ORTHO05D001984 6.4e-23 111.7 70 77.1
Manes.03G101000 Manihot esculenta HOM05D002238 ORTHO05D001984 8.4e-23 111.3 70 77.1
SHI10149 Sapria himalayana HOM05D002238 ORTHO05D001984 1.1e-22 110.9 70 74.3
Thecc.10G082400 Theobroma cacao HOM05D002238 ORTHO05D001984 1.1e-22 110.9 70 77.1
Gohir.A05G411500 Gossypium hirsutum HOM05D002238 ORTHO05D001984 1.4e-22 110.5 70 77.1
A05p40470 Brassica napus HOM05D002238 ORTHO05D001984 1.9e-22 110.2 70 74.3
C05p59570 Brassica napus HOM05D002238 ORTHO05D001984 1.9e-22 110.2 70 74.3
BraA05t22780Z Brassica rapa HOM05D002238 ORTHO05D001984 1.9e-22 110.2 70 74.3
CiPaw.01G209500 Carya illinoinensis HOM05D002238 ORTHO05D001984 1.9e-22 110.2 70 78.6
Aa31LG5G18320 Aethionema arabicum HOM05D002238 ORTHO05D001984 2.4e-22 109.8 70 74.3
COL.COLO4_17143 Corchorus olitorius HOM05D002238 ORTHO05D001984 3.2e-22 109.4 70 75.7
Duzib114G0194 Durio zibethinus HOM05D002238 ORTHO05D001984 3.2e-22 109.4 70 75.7
CDE05G0385 Ceratophyllum demersum HOM05D002238 ORTHO05D001984 4.2e-22 109.0 70 75.7
Sc04g0009070 Simmondsia chinensis HOM05D002238 ORTHO05D001984 4.2e-22 109.0 71 80.3
ATR0624G131 Amborella trichopoda HOM05D002238 ORTHO05D001984 5.4e-22 108.6 70 72.9
AUR62004701 Chenopodium quinoa HOM05D002238 ORTHO05D001984 5.4e-22 108.6 72 79.2
CANSAT21G0573 Cannabis sativa HOM05D002238 ORTHO05D001984 7.1e-22 108.2 71 77.5
CANSAT21G2220 Cannabis sativa HOM05D002238 ORTHO05D001984 7.1e-22 108.2 71 77.5
AUR62023617 Chenopodium quinoa HOM05D002238 ORTHO05D001984 7.1e-22 108.2 72 77.8
Ah.08g209290 Amaranthus hybridus HOM05D002238 ORTHO05D001984 9.3e-22 107.8 72 77.8
EL10Ac1g00031 Beta vulgaris HOM05D002238 ORTHO05D001984 9.3e-22 107.8 72 81.9
Zm00001eb228810 Zea mays HOM05D002238 ORTHO05D001984 1.6e-21 107.1 70 74.3
Zm00001eb228830 Zea mays HOM05D002238 ORTHO05D001984 1.6e-21 107.1 70 74.3
AUR62029701 Chenopodium quinoa HOM05D002238 ORTHO05D001984 4.6e-21 105.5 72 76.4
Os12g0403800 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D001984 6.0e-21 105.1 70 72.9
Nitab4.5_0001265g0080 Nicotiana tabacum HOM05D002238 ORTHO05D001984 1.0e-20 104.4 70 77.1
Nitab4.5_0001816g0140 Nicotiana tabacum HOM05D002238 ORTHO05D001984 1.0e-20 104.4 70 77.1
Peaxi162Scf00065g01518 Petunia axillaris HOM05D002238 ORTHO05D001984 1.8e-20 103.6 70 72.9
CAN.G1394.37 Capsicum annuum HOM05D002238 ORTHO05D001984 8.7e-20 101.3 70 72.9
PSO541G0351 Papaver somniferum HOM05D002238 ORTHO05D001984 8.7e-20 101.3 70 72.9
PSO675G0487 Papaver somniferum HOM05D002238 ORTHO05D001984 8.7e-20 101.3 70 72.9
PGSC0003DMG400012510 Solanum tuberosum HOM05D002238 ORTHO05D001984 3.3e-19 99.4 70 71.4
QL02p101482 Quercus lobata HOM05D002238 ORTHO05D001984 4.3e-19 99.0 73 69.9
SEGI_02051 Sequoiadendron giganteum HOM05D002238 ORTHO05D001984 5.6e-19 98.6 70 71.4
Solyc08g007520.4 Solanum lycopersicum HOM05D002238 ORTHO05D001984 7.4e-19 98.2 70 70.0
Sopen08g003480 Solanum pennellii HOM05D002238 ORTHO05D001984 7.4e-19 98.2 70 70.0
ECA236G2666 Erigeron canadensis HOM05D002238 ORTHO05D001984 9.6e-19 97.8 73 65.8
Pp3c22_2380 Physcomitrium patens HOM05D002238 ORTHO05D001984 1.1e-17 94.4 85 58.8
Nn3g19738 Nelumbo nucifera HOM05D002238 ORTHO05D001984 2.6e-16 89.7 57 75.4
Eucgr.G01770 Eucalyptus grandis HOM05D002238 ORTHO05D001984 3.4e-16 89.4 104 48.1
Mapoly0032s0043 Marchantia polymorpha HOM05D002238 ORTHO05D001984 1.4e-14 84.0 88 47.7
AUR62006368 Chenopodium quinoa HOM05D002238 ORTHO05D001984 5.5e-14 82.0 42 92.9
MBI16_g03601_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D001984 9.3e-14 81.3 42 90.5
SMO141G0199 Selaginella moellendorffii HOM05D002238 ORTHO05D001984 2.3e-12 76.6 69 56.5
Actinidia27652 Actinidia chinensis HOM05D002238 ORTHO05D001984 8.7e-12 74.7 38 92.1
QL02p101303 Quercus lobata HOM05D002238 ORTHO05D001984 1.5e-11 73.9 52 69.2
Dinv26619 Davidia involucrata HOM05D002238 ORTHO05D001984 3.3e-11 72.8 52 67.3
Lj1A789T53 Lonicera japonica HOM05D002238 ORTHO05D001984 7.4e-11 71.6 53 67.9
MCO02G242 Micromonas commoda HOM05D002238 ORTHO05D001984 1.4e-09 67.4 69 46.4
Cre03.g188200 Chlamydomonas reinhardtii HOM05D002238 ORTHO05D001984 1.8e-09 67.0 116 37.9
CDE05G1607 Ceratophyllum demersum HOM05D002238 ORTHO05D001984 5.3e-09 65.5 47 70.2
Lsat_1_v5_gn_7_113780 Lactuca sativa HOM05D002402 ORTHO05D002633 1.2e-08 64.3 44 72.7
MBI07_g09667_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D001984 1.7e-07 60.5 31 87.1
CBR_g31491 Chara braunii HOM05D002238 ORTHO05D001984 1.4e-06 57.4 46 58.7


User provided reference genes

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