Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 4.1e-220 767.7 371 100.0
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 2.9e-189 665.2 359 87.2
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.4e-188 662.9 372 86.6
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 7.1e-188 660.6 359 86.9
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 9.9e-182 640.2 359 84.1
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 6.4e-181 637.5 353 84.7
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 8.4e-181 637.1 360 82.8
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.1e-180 636.7 363 81.8
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.4e-180 635.6 375 80.3
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.1e-180 634.0 362 80.9
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 9.3e-180 633.6 375 80.0
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 2.1e-179 632.5 365 81.4
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 2.7e-179 632.1 359 82.5
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 4.6e-179 631.3 372 80.1
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 6.0e-179 630.9 365 80.8
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 6.0e-179 630.9 353 83.9
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.7e-178 629.4 367 80.7
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.0e-178 628.6 359 81.9
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 3.9e-178 628.2 362 83.1
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 3.9e-178 628.2 360 82.5
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 5.1e-178 627.9 364 81.3
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.1e-177 626.7 360 81.7
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.9e-177 625.9 383 78.6
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.9e-177 625.9 360 81.1
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 7.3e-177 624.0 353 83.0
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 1.3e-176 623.2 354 80.8
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.6e-176 622.9 353 82.2
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 1.6e-176 622.9 364 79.7
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 1.6e-176 622.9 364 79.7
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.1e-176 622.5 366 81.1
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.1e-176 622.5 352 81.5
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.1e-176 622.5 357 81.2
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 2.8e-176 622.1 353 82.2
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 3.6e-176 621.7 365 79.5
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.8e-176 621.3 352 81.5
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.8e-176 621.3 353 80.7
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 4.8e-176 621.3 361 80.3
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.2e-176 620.9 367 79.8
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.2e-176 620.9 354 81.9
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 8.1e-176 620.5 364 79.7
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.4e-175 619.8 350 81.7
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 2.4e-175 619.0 350 82.3
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.4e-175 619.0 376 80.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 4.0e-175 618.2 354 81.4
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 5.3e-175 617.8 365 80.3
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 9.0e-175 617.1 352 82.1
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.2e-174 616.7 361 79.5
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.5e-174 616.3 359 79.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.0e-174 615.9 352 81.5
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.4e-174 615.1 389 76.3
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 5.8e-174 614.4 356 79.8
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 5.8e-174 614.4 348 81.9
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-173 613.2 359 79.4
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.7e-173 612.8 369 78.9
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.7e-173 612.8 354 80.2
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.7e-173 612.8 354 81.1
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.8e-173 611.7 360 79.4
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 6.4e-173 610.9 354 80.8
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 6.4e-173 610.9 354 80.8
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 6.4e-173 610.9 363 78.8
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.4e-173 610.9 359 78.8
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 6.4e-173 610.9 352 80.4
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.1e-172 610.1 373 77.2
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 2.4e-172 609.0 348 81.3
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 4.2e-172 608.2 353 80.2
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 4.2e-172 608.2 350 80.3
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 7.1e-172 607.4 355 80.8
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 2.1e-171 605.9 351 80.1
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 2.7e-171 605.5 354 79.7
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 3.5e-171 605.1 351 79.8
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 4.6e-171 604.7 369 77.0
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 6.0e-171 604.4 349 82.5
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.0e-170 603.6 342 85.1
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 1.7e-170 602.8 362 78.5
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 2.3e-170 602.4 364 78.3
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 2.3e-170 602.4 356 77.8
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 5.1e-170 601.3 362 78.2
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 5.1e-170 601.3 353 78.2
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 6.6e-170 600.9 368 78.0
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 6.6e-170 600.9 352 78.7
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 8.7e-170 600.5 375 76.5
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 8.7e-170 600.5 353 79.3
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.5e-169 599.7 357 77.6
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.5e-169 599.7 353 79.3
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-169 599.7 365 76.2
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 2.5e-169 599.0 382 75.9
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 3.3e-169 598.6 365 76.2
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 5.6e-169 597.8 348 80.5
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 9.6e-169 597.0 358 79.1
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 6.2e-168 594.3 354 78.8
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 3.1e-167 592.0 358 78.8
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.2e-166 590.1 353 78.5
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 2.0e-166 589.3 353 79.3
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 5.8e-166 587.8 360 77.5
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 9.9e-166 587.0 373 73.2
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.7e-165 586.3 353 78.8
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.9e-165 585.5 354 77.4
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 8.4e-165 583.9 355 77.7
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.4e-165 583.9 369 74.8
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.4e-164 582.4 353 77.9
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 7.1e-164 580.9 365 75.3
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 6.7e-162 574.3 360 77.2
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 9.6e-161 570.5 350 76.3
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.6e-160 569.7 353 76.5
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.7e-160 568.5 368 73.4
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.4e-159 566.6 410 68.0
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.4e-159 565.8 353 75.4
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.8e-157 558.5 364 71.2
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 8.4e-157 557.4 353 74.2
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 2.1e-155 552.7 350 76.0
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 1.0e-154 550.4 356 74.2
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.1e-154 548.1 359 70.5
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 5.7e-153 544.7 378 69.6
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.3e-152 543.5 354 73.4
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.8e-152 542.3 436 63.3
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-151 540.0 350 73.4
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.8e-151 539.7 364 69.8
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.1e-151 538.9 353 71.7
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 9.0e-151 537.3 348 72.1
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.0e-149 533.9 359 71.6
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.2e-149 532.7 357 71.1
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 3.2e-148 528.9 292 83.9
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 3.2e-148 528.9 359 68.2
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.9e-147 524.2 357 69.5
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.8e-144 515.8 284 84.5
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.5e-140 502.7 358 69.3
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.2e-140 502.3 353 68.6
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.5e-140 501.5 362 66.3
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 7.4e-137 491.1 291 79.0
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.0e-134 483.0 719 41.3
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 2.6e-134 482.6 356 64.9
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 3.4e-134 482.3 355 63.9
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 9.7e-129 464.2 247 87.9
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 1.4e-127 460.3 227 96.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.3e-125 453.8 363 62.5
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 6.5e-125 451.4 307 68.4
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.5e-125 451.1 332 61.7
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.0e-109 401.0 362 53.9
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 1.0e-109 401.0 259 70.7
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.5e-108 397.1 244 76.2
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.8e-103 380.2 331 59.2
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.4e-97 359.0 332 56.0
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.4e-95 354.0 251 65.7
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 5.2e-90 335.5 202 81.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 8.9e-82 308.1 289 56.4
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 6.0e-54 215.7 131 77.9
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.2e-46 191.4 100 91.0
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.2e-46 191.4 132 72.7
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 2.7e-46 190.3 132 72.7
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 4.6e-46 189.5 132 73.5
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.5e-44 184.5 121 76.9
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 9.6e-44 181.8 131 70.2
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.2e-43 179.1 177 52.0
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.5e-39 167.2 93 86.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.6e-38 164.5 106 72.6
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 7.9e-38 162.2 98 76.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.6e-33 147.1 120 63.3
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.2e-32 144.1 115 62.6
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 1.2e-30 138.3 123 58.5
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 4.1e-26 123.2 69 87.0
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 3.2e-23 113.6 70 77.1
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 4.2e-23 113.2 78 67.9
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 6.1e-22 109.4 67 74.6
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 3.4e-17 93.6 84 57.1
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-15 88.6 56 75.0
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.4e-15 88.2 71 62.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.5e-15 86.3 134 43.3
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 4.7e-14 83.2 71 57.7
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.6e-12 77.4 49 67.3
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 6.5e-08 62.8 41 70.7
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 1.6e-06 58.2 31 83.9


User provided reference genes

Program Settings