Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21549 Striga asiatica HOM05D002267 ORTHO05D005902 1.3e-290 1002.3 497 100.0
SalBow1G1113 Salvia bowleyana HOM05D002267 ORTHO05D005902 1.7e-245 852.4 498 84.5
Migut.K00870 Erythranthe guttata HOM05D002267 ORTHO05D005902 8.7e-242 840.1 497 84.1
MSTRG.15422 Avicennia marina HOM05D002267 ORTHO05D005902 3.3e-241 838.2 499 84.2
Actinidia36296 Actinidia chinensis HOM05D002267 ORTHO05D005902 1.3e-240 836.3 498 82.7
Oeu049334.1 Olea europaea HOM05D002267 ORTHO05D005902 1.3e-240 836.3 498 83.5
Hund16106 Selenicereus undatus HOM05D002267 ORTHO05D005902 2.0e-238 828.9 497 81.9
Cpa.g.sc652.3 Carica papaya HOM05D002267 ORTHO05D005902 3.4e-238 828.2 497 81.7
DCAR_007527 Daucus carota HOM05D002267 ORTHO05D005902 5.8e-238 827.4 498 81.3
Haze_14088 Corylus avellana HOM05D002267 ORTHO05D005902 6.5e-237 823.9 496 80.6
Ciclev10011558m.g Citrus clementina HOM05D002267 ORTHO05D005902 1.9e-236 822.4 496 80.8
Thecc.07G119800 Theobroma cacao HOM05D002267 ORTHO05D005902 2.5e-236 822.0 498 80.9
Manes.02G064400 Manihot esculenta HOM05D002267 ORTHO05D005902 7.2e-236 820.5 496 80.6
TWI34G0765 Tripterygium wilfordii HOM05D002267 ORTHO05D005902 7.2e-236 820.5 498 80.7
Nitab4.5_0011661g0010 Nicotiana tabacum HOM05D002267 ORTHO05D005902 9.3e-236 820.1 496 80.8
COL.COLO4_17522 Corchorus olitorius HOM05D002267 ORTHO05D005902 1.2e-235 819.7 493 81.7
Duzib213G0616 Durio zibethinus HOM05D002267 ORTHO05D005902 1.6e-235 819.3 498 80.7
Lj2A1079T37 Lonicera japonica HOM05D002267 ORTHO05D005902 1.6e-235 819.3 496 81.7
Dinv34871 Davidia involucrata HOM05D002267 ORTHO05D005902 2.1e-235 818.9 496 80.8
Cfa007986 Carpinus fangiana HOM05D002267 ORTHO05D005902 4.6e-235 817.8 496 80.4
vmacro05590 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 7.9e-235 817.0 499 81.0
Gorai.002G053200 Gossypium raimondii HOM05D002267 ORTHO05D005902 1.3e-234 816.2 498 80.7
Cc03_g12570 Coffea canephora HOM05D002267 ORTHO05D005902 5.1e-234 814.3 498 81.1
Hund16105 Selenicereus undatus HOM05D002267 ORTHO05D005902 5.1e-234 814.3 535 77.0
CANSAT64G2636 Cannabis sativa HOM05D002267 ORTHO05D005902 6.7e-234 813.9 497 80.7
Gohir.D01G042400 Gossypium hirsutum HOM05D002267 ORTHO05D005902 6.7e-234 813.9 498 80.5
PGSC0003DMG400003469 Solanum tuberosum HOM05D002267 ORTHO05D005902 6.7e-234 813.9 496 80.2
Solyc06g005370.3 Solanum lycopersicum HOM05D002267 ORTHO05D005902 8.7e-234 813.5 496 80.2
Sopen06g001330 Solanum pennellii HOM05D002267 ORTHO05D005902 8.7e-234 813.5 496 80.6
CsaV3_5G038940 Cucumis sativus L. HOM05D002267 ORTHO05D005902 1.1e-233 813.1 493 80.7
Sed0022523 Sechium edule HOM05D002267 ORTHO05D005902 1.9e-233 812.4 496 80.2
Lsat_1_v5_gn_2_86320 Lactuca sativa HOM05D002267 ORTHO05D005902 3.3e-233 811.6 499 80.0
HanXRQChr17g0559871 Helianthus annuus HOM05D002267 ORTHO05D005902 5.7e-233 810.8 499 80.2
AUR62014559 Chenopodium quinoa HOM05D002267 ORTHO05D005902 7.4e-233 810.4 496 80.0
Gohir.A01G052800 Gossypium hirsutum HOM05D002267 ORTHO05D005902 7.4e-233 810.4 498 80.1
MD17G1071600 Malus domestica HOM05D002267 ORTHO05D005902 1.3e-232 809.7 499 78.8
Potri.017G109500 Populus trichocarpa HOM05D002267 ORTHO05D005902 1.3e-232 809.7 496 79.6
ClCG11G005190 Citrullus lanatus HOM05D002267 ORTHO05D005902 2.8e-232 808.5 496 80.2
QL02p053833 Quercus lobata HOM05D002267 ORTHO05D005902 3.7e-232 808.1 496 79.2
Gohir.D13G154300 Gossypium hirsutum HOM05D002267 ORTHO05D005902 4.8e-232 807.7 498 79.9
THA.LOC104805546 Tarenaya hassleriana HOM05D002267 ORTHO05D005902 6.3e-232 807.4 490 80.8
Gorai.013G174300 Gossypium raimondii HOM05D002267 ORTHO05D005902 1.4e-231 806.2 498 79.9
Lalb_Chr04g0258191 Lupinus albus HOM05D002267 ORTHO05D005902 2.4e-231 805.4 496 79.6
Peaxi162Scf00465g00103 Petunia axillaris HOM05D002267 ORTHO05D005902 2.4e-231 805.4 507 78.3
TAR629G0265 Trochodendron aralioides HOM05D002267 ORTHO05D005902 2.4e-231 805.4 498 79.1
arahy.Tifrunner.gnm1.ann1.D1YG1E Arachis hypogaea HOM05D002267 ORTHO05D005902 4.1e-231 804.7 496 80.0
AUR62008939 Chenopodium quinoa HOM05D002267 ORTHO05D005902 4.1e-231 804.7 496 79.4
Potri.004G106200 Populus trichocarpa HOM05D002267 ORTHO05D005902 4.1e-231 804.7 498 79.9
FAN14G5533 Fragaria x ananassa HOM05D002267 ORTHO05D005902 5.3e-231 804.3 496 78.6
Aqoxy3G03816 Aquilegia oxysepala HOM05D002267 ORTHO05D005902 6.9e-231 803.9 496 79.0
EL10Ac2g04655 Beta vulgaris HOM05D002267 ORTHO05D005902 9.0e-231 803.5 497 80.3
Thhalv10004074m.g Eutrema salsugineum HOM05D002267 ORTHO05D005902 9.0e-231 803.5 497 79.9
FvH4_6g45710 Fragaria vesca HOM05D002267 ORTHO05D005902 1.5e-230 802.7 496 78.6
BcaB07g30054 Brassica carinata HOM05D002267 ORTHO05D005902 2.0e-230 802.4 491 81.1
Psat3g192200 Pisum sativum HOM05D002267 ORTHO05D005902 2.0e-230 802.4 496 79.8
PGR042G2823 Punica granatum HOM05D002267 ORTHO05D005902 2.0e-230 802.4 496 79.2
CAN.G185.18 Capsicum annuum HOM05D002267 ORTHO05D005902 3.4e-230 801.6 496 79.6
FAN09G4431 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.4e-230 801.6 496 78.2
Lalb_Chr17g0336641 Lupinus albus HOM05D002267 ORTHO05D005902 3.4e-230 801.6 496 79.2
arahy.Tifrunner.gnm1.ann1.Y9SFAF Arachis hypogaea HOM05D002267 ORTHO05D005902 4.5e-230 801.2 496 79.2
A06p39620 Brassica napus HOM05D002267 ORTHO05D005902 1.3e-229 799.7 492 79.9
Gohir.A13G150000 Gossypium hirsutum HOM05D002267 ORTHO05D005902 1.7e-229 799.3 498 79.1
CiPaw.04G004900 Carya illinoinensis HOM05D002267 ORTHO05D005902 2.2e-229 798.9 500 78.6
BraA06t26877Z Brassica rapa HOM05D002267 ORTHO05D005902 3.8e-229 798.1 492 79.7
Medtr7g019260 Medicago truncatula HOM05D002267 ORTHO05D005902 3.8e-229 798.1 496 79.2
Nitab4.5_0002077g0130 Nicotiana tabacum HOM05D002267 ORTHO05D005902 3.8e-229 798.1 511 77.3
BcaC06g33731 Brassica carinata HOM05D002267 ORTHO05D005902 6.5e-229 797.3 489 80.4
Carub.0006s2794 Capsella rubella HOM05D002267 ORTHO05D005902 6.5e-229 797.3 495 79.6
Eucgr.J01450 Eucalyptus grandis HOM05D002267 ORTHO05D005902 8.5e-229 797.0 496 79.6
A02p37120 Brassica napus HOM05D002267 ORTHO05D005902 1.1e-228 796.6 491 80.4
MELO3C022075.2 Cucumis melo HOM05D002267 ORTHO05D005902 1.1e-228 796.6 491 79.6
BolC7t44387H Brassica oleracea HOM05D002267 ORTHO05D005902 1.9e-228 795.8 489 80.0
C07p38670 Brassica napus HOM05D002267 ORTHO05D005902 2.5e-228 795.4 489 80.0
FAN26G1557 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.2e-228 795.0 496 77.4
Atru.chr1.1114 Acer truncatum HOM05D002267 ORTHO05D005902 4.2e-228 794.7 493 79.3
Glyma.18G279400 Glycine max HOM05D002267 ORTHO05D005902 1.6e-227 792.7 496 78.4
AL5G20480 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 2.1e-227 792.3 489 79.8
ECA238G0812 Erigeron canadensis HOM05D002267 ORTHO05D005902 3.6e-227 791.6 483 79.5
RcHm_v2.0_Chr2g0163861 Rosa chinensis HOM05D002267 ORTHO05D005902 3.6e-227 791.6 496 77.8
AT3G30841 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 4.6e-227 791.2 491 79.0
PSO541G0287 Papaver somniferum HOM05D002267 ORTHO05D005902 4.6e-227 791.2 494 78.3
AL6G43080 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 6.1e-227 790.8 492 78.7
BolC2t11669H Brassica oleracea HOM05D002267 ORTHO05D005902 1.4e-226 789.6 489 79.6
BraA02t08698Z Brassica rapa HOM05D002267 ORTHO05D005902 1.8e-226 789.3 499 79.2
FAN23G1730 Fragaria x ananassa HOM05D002267 ORTHO05D005902 2.3e-226 788.9 496 77.4
Aa31LG2G3660 Aethionema arabicum HOM05D002267 ORTHO05D005902 3.9e-226 788.1 507 77.1
Ca_06721_v3 Cicer arietinum L. HOM05D002267 ORTHO05D005902 3.9e-226 788.1 496 78.4
Lj1g0004668 Lotus japonicus HOM05D002267 ORTHO05D005902 3.9e-226 788.1 494 78.9
PSO675G5323 Papaver somniferum HOM05D002267 ORTHO05D005902 1.1e-225 786.6 494 77.9
CARHR260400 Cardamine hirsuta HOM05D002267 ORTHO05D005902 2.0e-225 785.8 492 77.8
AT4G09520 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 7.4e-225 783.9 498 77.9
C02p56120 Brassica napus HOM05D002267 ORTHO05D005902 9.7e-225 783.5 491 79.2
Sabra04G0076200 Salix brachista HOM05D002267 ORTHO05D005902 9.7e-225 783.5 530 74.2
Sc14g0003340 Simmondsia chinensis HOM05D002267 ORTHO05D005902 2.2e-224 782.3 494 77.7
Ah.10g037400 Amaranthus hybridus HOM05D002267 ORTHO05D005902 4.8e-224 781.2 482 79.3
Phvul.008G021600 Phaseolus vulgaris HOM05D002267 ORTHO05D005902 4.8e-224 781.2 496 77.8
VMungo1383G0144 Vigna mungo HOM05D002267 ORTHO05D005902 6.3e-224 780.8 496 77.8
MBI14_g41042_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 4.5e-222 774.6 502 78.1
HPP92_013287 Vanilla planifolia HOM05D002267 ORTHO05D005902 5.0e-221 771.2 500 77.8
ATR0824G083 Amborella trichopoda HOM05D002267 ORTHO05D005902 1.8e-218 762.7 484 78.1
BcaB07g30055 Brassica carinata HOM05D002267 ORTHO05D005902 5.3e-215 751.1 432 83.8
CDE02G3890 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 4.5e-214 748.0 491 75.2
CDE04G2341 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 1.0e-213 746.9 489 75.5
Zm00001eb137710 Zea mays HOM05D002267 ORTHO05D005902 2.2e-213 745.7 517 73.5
HanXRQChr07g0200151 Helianthus annuus HOM05D002267 ORTHO05D005902 2.0e-206 722.6 444 79.5
Dinv33904 Davidia involucrata HOM05D002267 ORTHO05D005902 2.7e-206 722.2 439 81.8
FvH4_5g30870 Fragaria vesca HOM05D002267 ORTHO05D005902 3.8e-205 718.4 444 79.1
Sp2g18250 Schrenkiella parvula HOM05D002267 ORTHO05D005902 1.9e-204 716.1 444 79.3
SEGI_04709 Sequoiadendron giganteum HOM05D002267 ORTHO05D005902 1.6e-203 713.0 494 72.1
Mapoly0028s0072 Marchantia polymorpha HOM05D002267 ORTHO05D005902 3.6e-203 711.8 498 70.1
Os12g0536000 Oryza sativa ssp. japonica HOM05D002267 ORTHO05D005902 3.5e-198 695.3 443 78.3
GSVIVG01008609001 Vitis vinifera HOM05D002267 ORTHO05D005902 2.2e-197 692.6 444 77.7
SMO239G0110 Selaginella moellendorffii HOM05D002267 ORTHO05D005902 3.2e-196 688.7 488 71.5
TPR.G3251 Trifolium pratense HOM05D002267 ORTHO05D005902 4.4e-193 678.3 391 84.9
Pp3c1_4540 Physcomitrium patens HOM05D002267 ORTHO05D005902 1.4e-191 673.3 489 67.1
unitig_748.g7015 Utricularia gibba HOM05D002267 ORTHO05D005902 4.7e-187 658.3 410 79.3
MBI14_g39140_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 2.0e-182 642.9 496 68.3
MBI14_g13654_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 1.3e-176 623.6 476 68.7
Nn4g23627 Nelumbo nucifera HOM05D002267 ORTHO05D005902 2.2e-176 622.9 496 65.5
CSS0025473 Camellia sinensis var. sinensis HOM05D002267 ORTHO05D005902 2.9e-176 622.5 383 79.9
CBR_g48938 Chara braunii HOM05D002267 ORTHO05D005902 2.3e-173 612.8 512 61.3
FAN05G0821 Fragaria x ananassa HOM05D002267 ORTHO05D005902 6.4e-168 594.7 385 76.4
Psat0s4662g0040 Pisum sativum HOM05D002267 ORTHO05D005902 1.1e-167 594.0 501 62.9
RcHm_v2.0_Chr5g0053071 Rosa chinensis HOM05D002267 ORTHO05D005902 7.6e-161 571.2 387 73.6
vmacro23424 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 8.9e-154 547.7 467 64.5
Prupe.3G243300 Prunus persica HOM05D002267 ORTHO05D005902 1.0e-149 534.3 350 75.7
Sabra17G0091700 Salix brachista HOM05D002267 ORTHO05D008106 4.8e-147 525.4 386 69.2
Cre12.g527400 Chlamydomonas reinhardtii HOM05D002267 ORTHO05D005902 2.2e-144 516.5 533 50.7
FAN18G0049 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.5e-132 477.2 266 87.6
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 7.4e-124 448.4 600 45.8
HanXRQChr03g0070911 Helianthus annuus HOM05D002267 ORTHO05D005902 6.7e-117 425.2 245 83.3
Zm00001eb410550 Zea mays HOM05D002267 ORTHO05D005902 1.1e-111 407.9 240 82.1
HanXRQChr03g0070931 Helianthus annuus HOM05D002267 ORTHO05D005902 2.9e-104 383.3 303 65.3
AagrBONN_evm.TU.Sc2ySwM_228.1779 Anthoceros agrestis HOM05D002267 ORTHO05D005902 4.2e-103 379.4 238 76.5
FAN13G3322 Fragaria x ananassa HOM05D002267 ORTHO05D005902 2.1e-102 377.1 225 82.2
BcaC03g17613 Brassica carinata HOM05D002267 ORTHO05D005902 3.7e-99 366.3 254 71.7
MBI14_g42567_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 1.4e-98 364.4 487 46.4
AagrBONN_evm.TU.Sc2ySwM_362.1960 Anthoceros agrestis HOM05D002267 ORTHO05D005902 2.4e-98 363.6 433 49.2
MD09G1080600 Malus domestica HOM05D002267 ORTHO05D005902 1.7e-96 357.5 303 65.3
HPP92_013297 Vanilla planifolia HOM05D002267 ORTHO05D005902 4.2e-87 326.2 243 70.4
SHI33593 Sapria himalayana HOM05D002267 ORTHO05D005902 1.4e-85 321.2 239 65.7
FAN02G0256 Fragaria x ananassa HOM05D002267 ORTHO05D005902 2.0e-84 317.4 313 55.0
Duzib177G0042 Durio zibethinus HOM05D002267 ORTHO05D005902 1.2e-78 298.1 254 63.4
TAR374G1196 Trochodendron aralioides HOM05D002267 ORTHO05D005902 1.1e-55 221.9 260 50.8
TPR.G11470 Trifolium pratense HOM05D002267 ORTHO05D005902 1.4e-50 204.9 161 64.0
Oeu025125.1 Olea europaea HOM05D002267 ORTHO05D005902 3.5e-49 200.3 151 66.2
BcaC06g30839 Brassica carinata HOM05D002267 ORTHO05D005902 5.1e-48 196.4 273 45.1
HanXRQChr17g0560661 Helianthus annuus HOM05D002267 ORTHO05D027489 1.1e-47 195.3 103 87.4
BcaB07g30056 Brassica carinata HOM05D002267 ORTHO05D027489 1.4e-45 188.3 96 91.7
MBI14_g30826_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D027489 9.9e-44 182.2 104 82.7
HPP92_013296 Vanilla planifolia HOM05D002267 ORTHO05D005902 1.3e-43 181.8 151 66.2
CARHR060050 Cardamine hirsuta HOM05D002267 ORTHO05D005902 1.4e-42 178.3 145 61.4
MD09G1080700 Malus domestica HOM05D002267 ORTHO05D005902 1.2e-33 148.7 104 66.3
Sed0003994 Sechium edule HOM05D002267 ORTHO05D007330 5.1e-32 143.3 150 51.3
GSVIVG01036480001 Vitis vinifera HOM05D002267 ORTHO05D005902 3.6e-30 137.1 75 85.3
Duzib168G0178 Durio zibethinus HOM05D002267 ORTHO05D029252 9.9e-28 129.0 79 77.2
Glyma.20G047400 Glycine max HOM05D002267 ORTHO05D029252 1.3e-27 128.6 85 74.1
MBI14_g13653_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D035901 4.6e-25 120.2 166 49.4
Glyma.04G110800 Glycine max HOM05D002267 ORTHO05D029252 1.1e-18 99.0 93 58.1
CAN.G464.25 Capsicum annuum HOM05D002267 ORTHO05D020089 4.0e-13 80.5 60 73.3
FAN18G1196 Fragaria x ananassa HOM05D002267 ORTHO05D035901 6.9e-13 79.7 71 56.3
Glyma.U031218 Glycine max HOM05D002267 ORTHO05D029252 3.2e-10 70.9 36 86.1
BcaB04g17555 Brassica carinata HOM05D002267 ORTHO05D092878 1.2e-09 68.9 51 66.7
RcHm_v2.0_Chr5g0053081 Rosa chinensis HOM05D002267 ORTHO05D035901 2.3e-08 64.7 38 71.1
Nn5g27547 Nelumbo nucifera HOM05D002267 ORTHO05D027489 3.9e-08 63.9 30 90.0
MELO3C034926.2 Cucumis melo HOM05D002267 ORTHO05D001928 4.8e-06 57.0 38 71.1


User provided reference genes

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