Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 1.8e-165 585.9 295 100.0
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 7.3e-95 351.3 256 69.1
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 2.3e-93 346.3 263 65.8
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.0e-80 304.3 251 61.0
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.3e-80 303.9 251 61.0
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.9e-79 300.1 267 60.3
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 9.6e-79 297.7 164 89.0
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.1e-77 294.3 251 57.8
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.3e-77 292.0 256 57.4
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.9e-77 291.6 249 59.8
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.9e-77 291.6 249 59.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 9.0e-77 291.2 249 59.4
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 9.0e-77 291.2 249 59.4
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.2e-76 290.8 249 59.8
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.2e-76 290.8 256 57.4
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 1.5e-76 290.4 249 59.4
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.5e-76 290.4 249 59.4
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 9.9e-76 287.7 251 55.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 1.3e-75 287.3 249 58.2
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.2e-75 286.6 248 56.5
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 6.4e-75 285.0 254 57.1
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 1.4e-74 283.9 249 56.6
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 1.9e-74 283.5 256 55.5
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 2.4e-74 283.1 249 55.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 3.2e-74 282.7 263 54.8
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 5.4e-74 282.0 257 57.2
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.4e-74 282.0 254 56.3
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 1.2e-73 280.8 254 54.7
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.6e-73 280.4 251 54.6
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.1e-73 280.0 261 54.0
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 4.6e-73 278.9 257 54.1
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 6.0e-73 278.5 254 53.9
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 6.0e-73 278.5 254 56.3
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.0e-72 277.7 256 54.7
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 1.3e-72 277.3 248 56.9
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 1.1e-71 274.2 256 53.9
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 1.1e-71 274.2 256 54.3
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.9e-71 273.5 251 54.6
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 2.5e-71 273.1 250 55.6
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 2.5e-71 273.1 248 56.5
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 7.3e-71 271.6 251 55.8
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.6e-70 270.4 247 53.8
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 1.6e-70 270.4 251 55.0
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 3.6e-70 269.2 254 56.3
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 4.8e-70 268.9 257 55.3
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 4.8e-70 268.9 254 53.1
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 4.8e-70 268.9 257 55.6
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 8.1e-70 268.1 256 54.7
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.4e-69 267.3 258 52.3
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 2.4e-69 266.5 256 53.5
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 1.5e-68 263.8 251 54.6
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.5e-68 263.8 263 51.3
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 2.6e-68 263.1 257 54.9
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 4.5e-68 262.3 306 45.8
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 4.5e-68 262.3 251 54.2
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 2.2e-67 260.0 259 52.1
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 2.9e-67 259.6 212 60.4
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 2.9e-67 259.6 225 57.8
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 3.8e-67 259.2 254 50.4
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 4.9e-67 258.8 257 52.1
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 4.9e-67 258.8 260 51.2
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 4.9e-67 258.8 258 53.5
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 8.4e-67 258.1 256 52.0
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.4e-66 257.3 256 50.8
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.9e-66 256.9 251 53.4
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 2.4e-66 256.5 251 51.0
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 2.4e-66 256.5 256 51.2
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 7.1e-66 255.0 257 52.1
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 2.1e-65 253.4 257 51.8
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 4.6e-65 252.3 217 59.9
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 6.0e-65 251.9 260 49.6
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.0e-64 251.1 257 51.8
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 1.8e-64 250.4 237 53.2
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.8e-64 250.4 259 51.0
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 3.9e-64 249.2 253 52.6
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 3.9e-64 249.2 253 52.6
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 3.9e-64 249.2 253 52.6
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 5.1e-64 248.8 254 49.6
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 8.7e-64 248.1 253 52.6
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 1.9e-63 246.9 225 55.6
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 3.3e-63 246.1 239 52.7
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 4.3e-63 245.7 237 52.7
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 4.3e-63 245.7 248 48.8
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 5.6e-63 245.4 259 48.6
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.3e-62 244.2 271 49.4
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 4.8e-62 242.3 267 47.6
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 1.4e-61 240.7 259 47.9
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 4.0e-61 239.2 257 47.9
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 3.4e-60 236.1 249 48.2
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 5.8e-60 235.3 209 56.0
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 2.9e-59 233.0 232 50.0
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 2.9e-59 233.0 249 48.2
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 2.9e-59 233.0 244 48.0
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 3.8e-59 232.6 228 50.0
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.1e-58 231.1 258 47.7
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 1.1e-58 231.1 244 49.6
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.9e-55 220.3 244 47.1
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 9.6e-55 218.0 225 49.8
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 1.7e-51 207.2 156 64.7
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 2.5e-50 203.4 258 43.4
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.8e-45 187.2 166 54.8
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.9e-43 179.9 153 57.5
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 1.2e-41 174.5 250 41.6
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 3.3e-39 166.4 179 49.2
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 6.3e-38 162.2 122 61.5
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 3.1e-37 159.8 276 35.5
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 9.1e-37 158.3 263 36.5
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 1.3e-35 154.5 143 48.3
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 1.3e-35 154.5 143 48.3
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 1.3e-35 154.5 143 48.3
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.9e-35 153.3 147 49.0
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.5e-34 150.2 151 49.7
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 8.2e-30 135.2 108 58.3
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 5.3e-29 132.5 208 41.8
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 3.5e-28 129.8 118 51.7
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 9.7e-23 111.7 162 45.7
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 9.7e-23 111.7 160 42.5
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 5.9e-20 102.4 85 60.0
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.6e-17 94.4 96 46.9
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 1.0e-16 91.7 89 51.7
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 2.8e-14 83.6 89 48.3
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 6.3e-14 82.4 157 39.5
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.2e-12 78.2 76 55.3
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 2.7e-12 77.0 72 56.9
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 5.9e-12 75.9 48 68.8
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 5.9e-12 75.9 74 52.7
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 4.2e-10 69.7 67 47.8
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.2e-09 68.2 76 44.7
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 4.4e-07 59.7 89 41.6


User provided reference genes

Program Settings