Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 1.6e-252 875.5 430 100.0
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 1.2e-167 593.6 481 65.1
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 1.2e-165 587.0 479 64.1
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 3.1e-155 552.4 474 60.1
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 7.7e-154 547.7 484 60.1
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 7.7e-154 547.7 474 59.7
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.3e-153 547.0 476 60.3
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 1.3e-153 547.0 472 60.4
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 2.3e-153 546.2 470 59.6
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 5.0e-153 545.0 481 58.6
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 8.6e-153 544.3 469 60.8
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 2.5e-152 542.7 470 59.6
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 9.5e-152 540.8 479 59.9
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 9.5e-152 540.8 473 59.4
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 3.6e-151 538.9 467 59.7
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 3.6e-151 538.9 467 59.7
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 3.6e-151 538.9 476 58.8
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 1.0e-150 537.3 470 59.1
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 5.2e-150 535.0 464 60.1
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 1.2e-149 533.9 479 58.7
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.2e-149 533.9 472 58.7
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 1.5e-149 533.5 479 59.1
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 2.0e-149 533.1 481 58.4
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 3.4e-149 532.3 468 58.8
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 3.4e-149 532.3 356 74.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 4.4e-149 531.9 488 56.6
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 7.5e-149 531.2 475 58.5
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 9.8e-149 530.8 461 59.2
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 9.8e-149 530.8 475 58.7
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 1.3e-148 530.4 491 56.2
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 1.7e-148 530.0 479 56.8
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 1.7e-148 530.0 473 58.6
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 1.7e-148 530.0 478 58.2
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 2.2e-148 529.6 517 54.7
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 8.3e-148 527.7 471 57.5
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 1.1e-147 527.3 479 57.0
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 5.4e-147 525.0 552 51.8
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 9.2e-147 524.2 475 57.5
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.6e-146 523.5 488 55.5
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 2.0e-146 523.1 444 59.7
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 2.0e-146 523.1 468 58.1
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 2.7e-146 522.7 479 56.6
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 3.5e-146 522.3 468 58.5
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 4.5e-146 521.9 475 56.6
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.3e-145 520.4 479 56.2
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 1.3e-145 520.4 477 57.0
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 1.3e-145 520.4 479 56.4
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 1.7e-145 520.0 493 55.6
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 1.7e-145 520.0 474 57.2
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.9e-145 519.2 511 52.8
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 3.9e-145 518.8 476 57.4
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 6.6e-145 518.1 465 57.6
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 6.6e-145 518.1 467 58.0
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 1.9e-144 516.5 499 55.7
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 2.5e-144 516.2 443 60.3
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 2.5e-144 516.2 477 57.0
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 4.3e-144 515.4 475 56.6
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 9.5e-144 514.2 484 55.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.6e-143 513.5 475 57.5
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 1.6e-143 513.5 468 56.2
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 2.8e-143 512.7 476 55.5
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 2.8e-143 512.7 467 55.7
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 6.1e-143 511.5 476 55.9
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 6.1e-143 511.5 474 56.8
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 8.0e-143 511.1 474 57.0
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 8.0e-143 511.1 476 56.7
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.0e-142 510.8 476 57.4
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.4e-142 510.4 468 57.9
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 4.0e-142 508.8 467 56.1
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 5.2e-142 508.4 468 55.3
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 5.2e-142 508.4 467 55.7
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 6.8e-142 508.1 474 57.4
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 8.9e-142 507.7 506 53.6
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 1.2e-141 507.3 463 56.6
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 5.8e-141 505.0 468 54.7
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.3e-140 503.8 468 54.5
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 1.7e-140 503.4 469 54.4
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 1.7e-140 503.4 478 54.2
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 2.2e-140 503.1 475 55.2
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 2.9e-140 502.7 474 55.9
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 2.9e-140 502.7 449 56.6
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 2.9e-140 502.7 468 54.7
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 8.3e-140 501.1 479 55.1
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 8.3e-140 501.1 470 56.6
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 1.4e-139 500.4 477 55.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.9e-139 500.0 480 54.4
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 5.4e-139 498.4 467 54.2
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 3.5e-138 495.7 466 57.5
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 6.0e-138 495.0 461 57.3
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 6.0e-138 495.0 478 53.8
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 7.8e-138 494.6 470 55.7
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 2.3e-137 493.0 496 52.0
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 3.1e-134 482.6 475 53.9
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 5.2e-134 481.9 467 53.5
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 5.8e-133 478.4 624 45.2
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 8.6e-129 464.5 468 53.2
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 2.5e-128 463.0 474 54.0
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 1.2e-127 460.7 443 54.9
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 5.4e-123 445.3 476 50.6
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 5.1e-121 438.7 350 63.1
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 5.2e-118 428.7 460 50.4
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 9.9e-117 424.5 381 60.4
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 8.1e-111 404.8 249 74.3
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 3.1e-110 402.9 378 57.7
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 4.0e-110 402.5 394 55.8
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 8.4e-108 394.8 474 47.3
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 6.0e-106 388.7 472 46.8
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 6.0e-106 388.7 267 69.3
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 8.1e-103 378.3 351 57.5
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 1.7e-100 370.5 479 45.1
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 1.9e-99 367.1 250 66.8
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 4.6e-98 362.5 476 45.8
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 4.8e-95 352.4 251 64.1
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 2.4e-94 350.1 463 43.8
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 1.4e-86 324.3 351 51.6
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 2.1e-74 283.9 443 41.1
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 2.5e-72 276.9 527 36.1
Cpa.g.sc1441.3 Carica papaya HOM05D004762 ORTHO05D005972 6.3e-63 245.7 138 76.1
Aqoxy4G02491 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 5.5e-59 232.6 185 62.2
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 2.7e-58 230.3 454 35.0
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 6.3e-55 219.2 268 47.8
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 1.4e-54 218.0 528 32.4
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 7.0e-54 215.7 259 49.0
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 7.7e-53 212.2 475 30.3
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 4.1e-46 189.9 239 48.1
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.4e-46 189.5 239 47.7
Phvul.010G113266 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.6e-42 177.9 121 66.9
A04p29970 Brassica napus HOM05D004762 ORTHO05D001193 6.8e-41 172.6 236 43.2
Potri.015G093000 Populus trichocarpa HOM05D004762 ORTHO05D005972 9.8e-40 168.7 172 54.7
BraA04t18511Z Brassica rapa HOM05D004762 ORTHO05D001193 5.9e-37 159.5 260 38.5
Aqoxy4G02490 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 3.0e-33 147.1 144 53.5
BcaB01g03555 Brassica carinata HOM05D004762 ORTHO05D005972 5.2e-33 146.4 174 47.7
TPR.G10834 Trifolium pratense HOM05D004762 ORTHO05D005972 1.0e-28 132.1 89 62.9
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 2.8e-26 124.0 95 58.9
Nitab4.5_0006049g0030 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.1e-25 120.6 74 78.4
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 8.9e-25 119.0 90 60.0
TAR633G0702 Trochodendron aralioides HOM05D003030 ORTHO05D003610 6.4e-23 112.8 152 45.4
SEGI_20752 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 9.2e-22 109.0 75 69.3
BcaB06g29139 Brassica carinata HOM05D004762 ORTHO05D005972 5.0e-20 103.2 74 64.9
Aqoxy4G02489 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 3.3e-19 100.5 67 74.6
QL11p009420 Quercus lobata HOM05D004762 ORTHO05D005972 2.1e-18 97.8 63 79.4
EL10Ac2g03328 Beta vulgaris HOM05D004762 ORTHO05D005972 3.6e-18 97.1 84 57.1
BcaC01g05421 Brassica carinata HOM05D002909 ORTHO05D000493 3.5e-13 80.5 53 71.7
C03p26800 Brassica napus HOM05D000223 ORTHO05D001193 3.5e-13 80.5 53 71.7
BolC3t15065H Brassica oleracea HOM05D000223 ORTHO05D001193 3.5e-13 80.5 53 71.7
EL10Ac6g13956 Beta vulgaris HOM05D004762 ORTHO05D005972 6.6e-12 76.3 51 72.5
EL10Ac6g14685 Beta vulgaris HOM05D004762 ORTHO05D005972 1.1e-11 75.5 64 57.8
arahy.Tifrunner.gnm1.ann1.38D1EG Arachis hypogaea HOM05D005637 ORTHO05D006983 1.5e-11 75.1 113 38.1
Nitab4.5_0004804g0050 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.4e-09 68.6 49 69.4
arahy.Tifrunner.gnm1.ann1.SGI312 Arachis hypogaea HOM05D004762 ORTHO05D005972 8.9e-09 65.9 55 58.2
GSVIVG01022727001 Vitis vinifera HOM05D004762 ORTHO05D005972 2.2e-07 61.2 51 54.9


User provided reference genes

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