Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03046 Striga asiatica HOM05D003160 ORTHO05D010088 2.2e-121 439.1 247 100.0
CANSAT56G1121 Cannabis sativa HOM05D003160 ORTHO05D010088 7.9e-26 121.7 213 39.9
PGSC0003DMG400007007 Solanum tuberosum HOM05D003160 ORTHO05D010088 7.9e-26 121.7 175 38.9
TAR374G0774 Trochodendron aralioides HOM05D003160 ORTHO05D010088 5.1e-25 119.0 173 42.8
Sopen05g028910 Solanum pennellii HOM05D003160 ORTHO05D010088 1.1e-24 117.9 170 39.4
Manes.05G019500 Manihot esculenta HOM05D003160 ORTHO05D010088 3.3e-24 116.3 178 40.4
COL.COLO4_06252 Corchorus olitorius HOM05D003160 ORTHO05D010088 9.6e-24 114.8 175 40.0
Solyc05g050500.1 Solanum lycopersicum HOM05D003160 ORTHO05D010088 9.6e-24 114.8 163 38.7
SalBow3G1544 Salvia bowleyana HOM05D003160 ORTHO05D010088 1.6e-23 114.0 167 43.1
SalBow3G2702 Salvia bowleyana HOM05D003160 ORTHO05D010088 1.6e-23 114.0 167 43.1
TWI59G0107 Tripterygium wilfordii HOM05D003160 ORTHO05D010088 2.8e-23 113.2 215 35.8
ClCG05G000620 Citrullus lanatus HOM05D001628 ORTHO05D001568 3.7e-23 112.8 195 39.0
Potri.014G102100 Populus trichocarpa HOM05D003160 ORTHO05D010088 4.8e-23 112.5 217 36.4
Lalb_Chr15g0076361 Lupinus albus HOM05D003160 ORTHO05D010088 6.2e-23 112.1 205 35.6
CANSAT56G3603 Cannabis sativa HOM05D003160 ORTHO05D010088 1.1e-22 111.3 160 43.1
Thecc.01G337400 Theobroma cacao HOM05D003160 ORTHO05D010088 1.4e-22 110.9 191 37.7
Nitab4.5_0003865g0070 Nicotiana tabacum HOM05D003160 ORTHO05D010088 1.8e-22 110.5 184 40.8
CAN.G360.9 Capsicum annuum HOM05D003160 ORTHO05D010088 3.1e-22 109.8 155 36.8
Sabra14G0075100 Salix brachista HOM05D003160 ORTHO05D010088 3.1e-22 109.8 217 37.8
Gohir.D12G117600 Gossypium hirsutum HOM05D003160 ORTHO05D010088 9.0e-22 108.2 161 39.8
QL08p046202 Quercus lobata HOM05D003160 ORTHO05D010088 9.0e-22 108.2 211 35.1
QL08p046209 Quercus lobata HOM05D003160 ORTHO05D010088 1.5e-21 107.5 211 35.1
QL08p046215 Quercus lobata HOM05D003160 ORTHO05D010088 1.5e-21 107.5 211 35.1
Migut.B01904 Erythranthe guttata HOM05D003160 ORTHO05D010088 2.0e-21 107.1 204 38.7
PSO384G0028 Papaver somniferum HOM05D003160 ORTHO05D010088 1.7e-20 104.0 230 33.0
Ciclev10021230m.g Citrus clementina HOM05D003160 ORTHO05D010088 2.2e-20 103.6 184 35.9
Gorai.008G127400 Gossypium raimondii HOM05D003160 ORTHO05D010088 2.2e-20 103.6 161 38.5
Atru.chr5.726 Acer truncatum HOM05D003160 ORTHO05D010088 3.8e-20 102.8 178 38.8
MELO3C006001.2 Cucumis melo HOM05D003160 ORTHO05D010088 3.8e-20 102.8 196 36.2
Duzib138G0284 Durio zibethinus HOM05D003160 ORTHO05D010088 6.5e-20 102.1 172 37.2
CsaV3_3G007840 Cucumis sativus L. HOM05D000126 ORTHO05D003017 8.4e-20 101.7 168 36.3
Nn1g00361 Nelumbo nucifera HOM05D000716 ORTHO05D004822 8.4e-20 101.7 219 33.8
Lj1g0008335 Lotus japonicus HOM05D003160 ORTHO05D010088 1.1e-19 101.3 214 33.2
Aqoxy7G00032 Aquilegia oxysepala HOM05D003160 ORTHO05D010088 1.9e-19 100.5 184 36.4
Gohir.A12G114100 Gossypium hirsutum HOM05D003160 ORTHO05D010088 4.2e-19 99.4 198 35.4
MD01G1085700 Malus domestica HOM05D003160 ORTHO05D010088 1.2e-18 97.8 130 41.5
FAN01G1829 Fragaria x ananassa HOM05D003160 ORTHO05D010088 1.0e-17 94.7 177 37.9
FAN03G1832 Fragaria x ananassa HOM05D003160 ORTHO05D010088 1.0e-17 94.7 137 43.8
Phvul.006G115400 Phaseolus vulgaris HOM05D003160 ORTHO05D010088 3.9e-17 92.8 173 40.5
Medtr7g117900 Medicago truncatula HOM05D003160 ORTHO05D010088 5.1e-17 92.4 229 35.8
VMungo0540G0853 Vigna mungo HOM05D003160 ORTHO05D010088 6.7e-17 92.0 214 38.8
Ca_09526_v3 Cicer arietinum L. HOM05D003160 ORTHO05D010088 1.1e-16 91.3 236 32.6
Glyma.19G257900 Glycine max HOM05D003160 ORTHO05D010088 1.5e-16 90.9 226 34.1
Dinv34236 Davidia involucrata HOM05D003160 ORTHO05D010088 2.5e-16 90.1 121 46.3
Sed0027763 Sechium edule HOM05D003160 ORTHO05D010088 2.5e-16 90.1 192 34.4
FvH4_7g17180 Fragaria vesca HOM05D003160 ORTHO05D010088 3.3e-16 89.7 177 36.2
FAN06G3527 Fragaria x ananassa HOM05D003160 ORTHO05D010088 4.3e-16 89.4 177 36.2
MBI12_g03929_MAGBIO Magnolia biondii HOM05D002361 ORTHO05D002843 4.3e-16 89.4 216 34.3
Psat3g001520 Pisum sativum HOM05D003160 ORTHO05D010088 2.1e-15 87.0 143 39.2
RcHm_v2.0_Chr1g0360571 Rosa chinensis HOM05D003160 ORTHO05D010088 8.2e-15 85.1 140 40.7
Prupe.2G193500 Prunus persica HOM05D003160 ORTHO05D010088 1.8e-14 84.0 155 33.5
TPR.G4697 Trifolium pratense HOM05D003160 ORTHO05D010088 2.4e-14 83.6 206 33.5
AagrBONN_evm.TU.Sc2ySwM_362.1478 Anthoceros agrestis HOM05D003160 ORTHO05D005967 1.5e-13 80.9 143 30.8
SEGI_06406 Sequoiadendron giganteum HOM05D003160 ORTHO05D005967 7.6e-13 78.6 143 30.8
Eucgr.E00026 Eucalyptus grandis HOM05D003160 ORTHO05D010088 1.0e-12 78.2 163 33.7
Cpa.g.sc96.69 Carica papaya HOM05D010811 ORTHO05D010088 3.8e-12 76.3 193 30.6
Nitab4.5_0000258g0330 Nicotiana tabacum HOM05D003160 ORTHO05D010088 3.2e-11 73.2 172 35.5
Sc23g0001970 Simmondsia chinensis HOM05D003160 ORTHO05D010088 5.5e-11 72.4 103 39.8
ECA236G4264 Erigeron canadensis HOM05D003160 ORTHO05D010088 7.2e-11 72.0 123 37.4
Gohir.D01G028200 Gossypium hirsutum HOM05D003160 ORTHO05D005967 1.6e-10 70.9 143 26.6
Gorai.002G037600 Gossypium raimondii HOM05D003160 ORTHO05D005967 1.6e-10 70.9 143 26.6
MD17G1003000 Malus domestica HOM05D003160 ORTHO05D005967 3.5e-10 69.7 143 25.2
Oeu001061.1 Olea europaea HOM05D003160 ORTHO05D005967 3.5e-10 69.7 143 28.0
arahy.Tifrunner.gnm1.ann1.0W8RKK Arachis hypogaea HOM05D010811 ORTHO05D010088 4.6e-10 69.3 228 30.3
arahy.Tifrunner.gnm1.ann1.ZR3V1T Arachis hypogaea HOM05D010811 ORTHO05D010088 6.1e-10 68.9 228 30.7
CANSAT25G2288 Cannabis sativa HOM05D003160 ORTHO05D005967 6.1e-10 68.9 143 25.9
Lj7P497T13 Lonicera japonica HOM05D010811 ORTHO05D010088 6.1e-10 68.9 133 39.8
SEGI_07127 Sequoiadendron giganteum HOM05D003160 ORTHO05D005967 7.9e-10 68.6 171 25.7
SEGI_11516 Sequoiadendron giganteum HOM05D003160 ORTHO05D005967 7.9e-10 68.6 171 25.7
THA.LOC104806778 Tarenaya hassleriana HOM05D003160 ORTHO05D005967 1.0e-09 68.2 148 28.4
CDE02G4562 Ceratophyllum demersum HOM05D003160 ORTHO05D005967 1.8e-09 67.4 143 23.1
Gohir.A01G040600 Gossypium hirsutum HOM05D003160 ORTHO05D005967 1.8e-09 67.4 143 25.2
Mapoly0173s0013 Marchantia polymorpha HOM05D003160 ORTHO05D005967 1.8e-09 67.4 160 28.1
Prupe.8G048900 Prunus persica HOM05D003160 ORTHO05D005967 1.8e-09 67.4 143 25.2
THA.LOC104816203 Tarenaya hassleriana HOM05D003160 ORTHO05D005967 1.8e-09 67.4 148 27.7
Sed0001592 Sechium edule HOM05D003160 ORTHO05D010088 2.3e-09 67.0 183 31.1
FvH4_2g12490 Fragaria vesca HOM05D003160 ORTHO05D005967 5.1e-09 65.9 143 25.2
FAN15G0653 Fragaria x ananassa HOM05D003160 ORTHO05D005967 5.1e-09 65.9 143 25.2
FAN24G0582 Fragaria x ananassa HOM05D003160 ORTHO05D005967 5.1e-09 65.9 143 25.2
FAN27G2017 Fragaria x ananassa HOM05D003160 ORTHO05D005967 5.1e-09 65.9 143 25.2
Hma1.2p1_0276F.1_g111290 Hydrangea macrophylla HOM05D003160 ORTHO05D005967 5.1e-09 65.9 198 23.7
Aa31LG5G1040 Aethionema arabicum HOM05D010811 ORTHO05D010088 6.7e-09 65.5 174 33.9
arahy.Tifrunner.gnm1.ann1.2I1I1C Arachis hypogaea HOM05D003160 ORTHO05D005967 6.7e-09 65.5 143 24.5
CSS0043683 Camellia sinensis var. sinensis HOM05D003160 ORTHO05D005967 6.7e-09 65.5 143 24.5
Cpa.g.sc66.121 Carica papaya HOM05D003160 ORTHO05D005967 8.7e-09 65.1 143 25.9
Ca_26100_v3 Cicer arietinum L. HOM05D003160 ORTHO05D005967 8.7e-09 65.1 143 24.5
Hund25486 Selenicereus undatus HOM05D003160 ORTHO05D005967 1.5e-08 64.3 143 25.9
Thecc.07G148800 Theobroma cacao HOM05D003160 ORTHO05D005967 1.5e-08 64.3 143 24.5
Atru.chr13.1881 Acer truncatum HOM05D003160 ORTHO05D005967 1.9e-08 63.9 143 25.2
PGR102G2401 Punica granatum HOM05D003160 ORTHO05D005967 1.9e-08 63.9 143 24.5
Nitab4.5_0006745g0030 Nicotiana tabacum HOM05D003160 ORTHO05D005967 3.3e-08 63.2 143 25.2
DCAR_002990 Daucus carota HOM05D003160 ORTHO05D000125 4.3e-08 62.8 83 37.3
Nitab4.5_0000425g0240 Nicotiana tabacum HOM05D003160 ORTHO05D005967 4.3e-08 62.8 143 24.5
Sabra13G0099100 Salix brachista HOM05D003160 ORTHO05D005967 5.7e-08 62.4 140 23.6
Peaxi162Scf00160g01617 Petunia axillaris HOM05D003160 ORTHO05D005967 9.7e-08 61.6 140 24.3
TAR625G0523 Trochodendron aralioides HOM05D003160 ORTHO05D005967 9.7e-08 61.6 143 25.2
Duzib213G0606 Durio zibethinus HOM05D003160 ORTHO05D005967 1.3e-07 61.2 164 23.8
COL.COLO4_17389 Corchorus olitorius HOM05D003160 ORTHO05D005967 1.6e-07 60.8 143 23.8
MBI05_g36578_MAGBIO Magnolia biondii HOM05D003160 ORTHO05D005967 1.6e-07 60.8 143 21.7
PGSC0003DMG400016959 Solanum tuberosum HOM05D003160 ORTHO05D005967 1.6e-07 60.8 143 25.2
Sopen12g029510 Solanum pennellii HOM05D003160 ORTHO05D005967 3.7e-07 59.7 143 25.2
TAR381G0896 Trochodendron aralioides HOM05D003160 ORTHO05D005967 4.8e-07 59.3 143 21.7
Ciclev10002351m.g Citrus clementina HOM05D003160 ORTHO05D005967 6.3e-07 58.9 143 23.8
QL10p002938 Quercus lobata HOM05D003160 ORTHO05D005967 6.3e-07 58.9 140 23.6
Solyc12g056830.1 Solanum lycopersicum HOM05D003160 ORTHO05D005967 6.3e-07 58.9 143 24.5
Ah.02g131050 Amaranthus hybridus HOM05D003160 ORTHO05D005967 8.2e-07 58.5 145 23.4
Potri.013G117000 Populus trichocarpa HOM05D003160 ORTHO05D005967 8.2e-07 58.5 143 23.8
Sp6g01230 Schrenkiella parvula HOM05D010811 ORTHO05D010088 1.1e-06 58.2 156 33.3
CARHR249440 Cardamine hirsuta HOM05D010811 ORTHO05D010088 1.4e-06 57.8 162 32.1
Sc04g0010380 Simmondsia chinensis HOM05D003160 ORTHO05D005967 1.4e-06 57.8 167 24.6
Migut.C00219 Erythranthe guttata HOM05D003160 ORTHO05D005967 2.4e-06 57.0 143 27.3
Lsat_1_v5_gn_1_4801 Lactuca sativa HOM05D003160 ORTHO05D005967 2.4e-06 57.0 143 21.7
Medtr4g103330 Medicago truncatula HOM05D003160 ORTHO05D005967 4.1e-06 56.2 193 22.8
Thhalv10028990m.g Eutrema salsugineum HOM05D010811 ORTHO05D010088 6.9e-06 55.5 106 35.8
AUR62005671 Chenopodium quinoa HOM05D003160 ORTHO05D005967 9.0e-06 55.1 143 23.1
Sabra19G0097900 Salix brachista HOM05D003160 ORTHO05D005967 9.0e-06 55.1 143 21.7
Sabra19G0101400 Salix brachista HOM05D003160 ORTHO05D005967 9.0e-06 55.1 143 21.7
Sed0027822 Sechium edule HOM05D003160 ORTHO05D010088 9.0e-06 55.1 177 27.7


User provided reference genes

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